Silkworm Genome Informatics Database

Gene

KWMTBOMO09590 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012996

Annotation

Glucose_dehydrogenase_[acceptor]?_partial_[Operophtera_brumata]

Location

Bomo_Chr16(-):4880113-4885658 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.19 Mitochondrial Reliability : 1.124

CDS

ATGAAAGGGGGACGCTGCAACTGGCCTCGTGGTAAAGTCCTGGGTGGCAGTTCCGTTTTGAACTACATGCTCTATCTTCGAGGTAATAGAAGAGATTATGACACATGGGAGGCGCTGGGCAACAAAGGATGGGGTTATAAGGACGTGCTTCATTACTTCAAGAAATCAGAAGATAACAAGAATCCGTATTTAGCTCAAACACCTTATCACAGTACCGGTGGATACCTTACGGTTGCAGAAGCCCCTTACCAAACGCCACTAGTGTCGAGTTTCATTGAAGGTGGATTAGAATTAGGGTACATGAACCGAGACATAAACGGCGAAAACCAGACAGGCTTTATGGTAGCCCAAGGCACTGTCAGACGAGGCAGCCGTTGTTCTACTTCAAAGGCTTTTCTGAGATCCGCTAAAGATCGCCAAAACTTACACATATCTATGCATTCTCACGTTACTAAAGTTCTAATAGATCCACGCACGAAAATAGCATTTGGTGTTGAATTTATACGCGATAAGATGGTACACCGCATCAGAGCACGAAAAGAGGTAATACTTTCCGCTGGTACCATCAACTCAGCTCAAATTTTAATGTTATCTGGCATCGGTCCAAGTGAAGAACTAGCAAAGCATCGGATACCTGTTATCCAGAATCTAAAGGTTGGCAGTAATTTGCAAGATCACATTGGTTTAGGCGGTTTAGCCTTCATGGTAAACAAAGAAATTTCAATTGTCGAACACCGCTTACATACAGTGAGCACTTTGATGGAGTACGCAGTGCTCGGTGAAGGTCCCTTGACAATTATGGGCGGAGTCGAGGGTCTAGCATTCGTGAATACGAAATACGCAAATGCTTCAGACGATTTTCCTGACATTGAATTCCACTTCATATCCGGTTCAACAAATTCCGACGGCGGTGAACAAATACGTAAAGCACACGGGCTGATGGAGAATTTTTATGATGCCGTTTTTAGACCGATTAACAATATGGACGTTTGGAGTATCATTCCGATGTTGCTACGTCCAAGAAGCAAAGGTTTTATACGGTTACGCAGCTCAAACCCATACGATTATCCATACATTTATCCAAATTATTTGATGGACGAAATGGATGTTAAGACGCTTGTTGAAGGCGTTAAAATCGCTATAGCATTGTCTAGGACACAAGCTTTCCAACGACATGGTTCCGTTTTGAATAAACACGTCTTTCCTGCGTGTGTTAGTATTAAGAGGTACACAGATGCGTATTGGGAATGCATGATAAGGCAGTACACGTGCACAATTTACCATCCAGTCGGCACTGCGAAAATGGGACCCTACTGGGATCCAGATGCAGTCGTTGACCCCGAACTGAGAGTGTATGGAATCAAAGGCCTTAGGGTAATCGATGGTAGCATAATGCCTAATTTGGTTAGTGGAAATACTAATGCACCAATTATTATGATTGGCGAAAAAGGCAGTGATATGATCAAAGAGTTCTGCCCAGTAAAAAGTATAGTTTCGGGCACCAGAATTTTGTTTGGTTTACTCCCAGGTTTGGGTGTCCTGATCGTGATCCGTATGGCTATACATTTGTACAGACCCGATATTGAAGATTCAGAGCATCGGGTCAGGGATCACCCGATCGAAGACCTGAACGATTGCTACGATTTTATCATCGTCGGTGGTGGTTCTGCTGGAGCGGTTTTAGCGAATCGTCTGACAGAAAACCCAGCATGGACAGTACTGTTATTAGAAGCTGGACCCGATGAGAATGTGCTTTCCGAAGTGCCCGTGCTGTTTCCGATATTACAAACTTCATTTATAGACTGGCAGTTTGTGACCGAGCCCAGTGATGATTATTGTCTCAGTATGATTGACAAAAGGTGTAAGTGGCCACGCGGTAAAGTTCTCGGTGGATCTAGTGTTCTAAATGCAATGTTATATATTAGAGGCAATAAACGTGATTACGATAACTGGAAAAGAATGGGAAACGCCGGTTGGAGTTACAACGATGTATTCCCCTACTTTTTGAAATCTGAAGATATCAGAATTGCAGAGCATCAAAATGATTCTTATCATGCAACTGGAGGTCCGTTAACCATAGAATATTTTAGATACGAGCATCCAATCACAAACAAGATTTTAGAAGCAGGCGCACAACTTGGTTACGTAGTAAGGGATGTAAACGGTGAATTTCAAACAGGATTCACTCGCTCTCAGGCAACCGTGCGAGATGGTCTTCGTTGCAGCACAGCAAAGGCATTTCTAAGACCTATATCTAAAAGAAAGAATCTTCACATCAGTATGAACTCTTTAGTAGAAAAAGTGCTGATTGATGAGTACCGAACAGTTTATGGGGTAAAGTTTTCAAAGCATGGTCATAAAAAAATCGTGAAAGCCAGCAAGGAAGTAATTCTATCGGCCGGTTCTATTCAGTCGCCGCAATTATTGATGTTATCTGGTATCGGCGATGCTGCTGAATTAAAAGAACTAGGGATATTTCCAATAGCACATCTGCCAGGAGTTGGGAAAAATTTACAAGACCATACTGCTATGGGCGGTCACTCCTTTCTTTTTGAGTACCCTTCTGACAAAGGAGCTCGTTTTTGCTTTGACCTAAATACTTTATTTTCTTTCGGAAATCTTATTGACTTTTGTATTCATAAAAGTGGATTAATGTACAGTATGGTAGAGGCTGAGGCAATGGCTTTTGTAAACACGAAATATCAAAACCCAGCTGAAGATTATCCCGATATACAATTATTTATTGCTCCGACAGCAGATAATATGGACGGCGGTCTTTTTGGGAAACGAGCTAATGGTATCACAGACGAAACATACGCTGAATTATATGAGGATCTATTATACGAATCATCGTTTTCAATCGTTCCACTTTTACTAAGACCAAAAAGCCGAGGCTACATCAAATTGCGGGATAGCAATCCTAATTCACCTCCTCTTATTTATCCAAACTACTATTCCCATCCAGACGATGTGAAGATTATGGTGGAAGGAGCCCGTATAGCACAAGCATTGGTAGAACAACCAGCACTAAAAGAAATGAATGCTCGACCCAACCCACATCGTAACCCTGGTTGCGAGGAGCATGAGTTGATGTCTTTCGAACACTTGGAATGTCAAGCCCGGCATCATACTCTGACCATCTATCATCCGGTAGGAACTTGCGCTATGGGCCCGCCCGACAATCCAGAGGCTGTTGTGGATGCAAGATTACGGGTACGAATGGTATCTTCATTAGATTTGTATGTAAATATTAAAGGTTCTAATTTAAAACCGACCATTGATCTGTTTTAG

Protein

MKGGRCNWPRGKVLGGSSVLNYMLYLRGNRRDYDTWEALGNKGWGYKDVLHYFKKSEDNKNPYLAQTPYHSTGGYLTVAEAPYQTPLVSSFIEGGLELGYMNRDINGENQTGFMVAQGTVRRGSRCSTSKAFLRSAKDRQNLHISMHSHVTKVLIDPRTKIAFGVEFIRDKMVHRIRARKEVILSAGTINSAQILMLSGIGPSEELAKHRIPVIQNLKVGSNLQDHIGLGGLAFMVNKEISIVEHRLHTVSTLMEYAVLGEGPLTIMGGVEGLAFVNTKYANASDDFPDIEFHFISGSTNSDGGEQIRKAHGLMENFYDAVFRPINNMDVWSIIPMLLRPRSKGFIRLRSSNPYDYPYIYPNYLMDEMDVKTLVEGVKIAIALSRTQAFQRHGSVLNKHVFPACVSIKRYTDAYWECMIRQYTCTIYHPVGTAKMGPYWDPDAVVDPELRVYGIKGLRVIDGSIMPNLVSGNTNAPIIMIGEKGSDMIKEFCPVKSIVSGTRILFGLLPGLGVLIVIRMAIHLYRPDIEDSEHRVRDHPIEDLNDCYDFIIVGGGSAGAVLANRLTENPAWTVLLLEAGPDENVLSEVPVLFPILQTSFIDWQFVTEPSDDYCLSMIDKRCKWPRGKVLGGSSVLNAMLYIRGNKRDYDNWKRMGNAGWSYNDVFPYFLKSEDIRIAEHQNDSYHATGGPLTIEYFRYEHPITNKILEAGAQLGYVVRDVNGEFQTGFTRSQATVRDGLRCSTAKAFLRPISKRKNLHISMNSLVEKVLIDEYRTVYGVKFSKHGHKKIVKASKEVILSAGSIQSPQLLMLSGIGDAAELKELGIFPIAHLPGVGKNLQDHTAMGGHSFLFEYPSDKGARFCFDLNTLFSFGNLIDFCIHKSGLMYSMVEAEAMAFVNTKYQNPAEDYPDIQLFIAPTADNMDGGLFGKRANGITDETYAELYEDLLYESSFSIVPLLLRPKSRGYIKLRDSNPNSPPLIYPNYYSHPDDVKIMVEGARIAQALVEQPALKEMNARPNPHRNPGCEEHELMSFEHLECQARHHTLTIYHPVGTCAMGPPDNPEAVVDARLRVRMVSSLDLYVNIKGSNLKPTIDLF

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

H9JTY4 A0A0L7K4S6 A0A232FFY1 U4UF26 N6TYT9 A0A151I6R9 + More
A0A1J1IYP0 A0A2P8ZKU9 A0A212FMT3 A0A067R0L4 A0A182VXW8 A0A026WDA0 E2BJJ8 A0A232FGG5 D2A3N4 A0A212FML5

Pubmed

19121390 26227816 28648823 23537049 29403074 22118469 + More
24845553 24508170 20798317 18362917 19820115

EMBL

BABH01003796 BABH01003797 JTDY01010401 KOB58222.1 NNAY01000267 OXU29612.1 + More
KB632330 ERL92579.1 APGK01055694 APGK01055695 APGK01055696 APGK01055697 APGK01055698 APGK01055699 APGK01055700 APGK01055701 APGK01055702 APGK01055703 KB741269 ENN71447.1 KQ978473 KYM93715.1 CVRI01000064 CRL05333.1 PYGN01000027 PSN57124.1 AGBW02007651 OWR55009.1 KK852802 KDR16285.1 KK107261 EZA53943.1 GL448571 EFN84155.1 OXU29610.1 KQ971348 EFA05534.2 OWR55004.1

Proteomes

UP000005204 UP000037510 UP000215335 UP000030742 UP000019118 UP000078542 + More
UP000183832 UP000245037 UP000007151 UP000027135 UP000075920 UP000053097 UP000008237 UP000007266

PRIDE

H9JTY4

Pfam

PF05199 GMC_oxred_C + More
PF00732 GMC_oxred_N

Interpro

IPR000172   GMC_OxRdtase_N        + More
IPR007867   GMC_OxRtase_C
IPR036188   FAD/NAD-bd_sf
IPR027424   Glucose_Oxidase_domain_2

SUPFAM

SSF51905 SSF51905

Gene 3D

3.50.50.60 4.10.450.10

ProteinModelPortal

H9JTY4 A0A0L7K4S6 A0A232FFY1 U4UF26 N6TYT9 A0A151I6R9 + More
A0A1J1IYP0 A0A2P8ZKU9 A0A212FMT3 A0A067R0L4 A0A182VXW8 A0A026WDA0 E2BJJ8 A0A232FGG5 D2A3N4 A0A212FML5

PDB

5OC1 E-value=1.19353e-51, Score=518

KEGG

101741817 no KO assigned | (RefSeq) glucose dehydrogenase [FAD, quinone]

GO

GO:0050660 GO:0016614 GO:0016021 GO:0016491 GO:0016020 GO:0016740 GO:0006108 GO:0030060 GO:0016615 GO:0000049 GO:0016876 GO:0055114

Length:

1096

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.94585

Exp number, first 60 AAs:

0.06175

Total prob of N-in:

0.09834

outside

1 - 1096

Pi

187.612743

Theta

169.933934

Tajima's D

0.083812

CLR

21.68674

CSRT

0.394130293485326

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics