SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09588
Pre Gene Modal
BGIBMGA012998
Annotation
PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.824
 

Sequence

CDS
ATGTGGGCGTGTGATCCGACGTTCACTTCGACGGTGATGGACAGTTACGGAGACGTGGTTGGGTCCACGTTCGCTCAAGCACTCACTAGTTTCCTCGCAGCGCAGTGTGCTCTTGTTGGAGACCATCTGTGGCCAGAGGATGCTATTGACTCTGTTGTCAATGGTAGTAGCTACGATTTTGTGGTGGTCGGAGCAGGATCAGCCGGCTCAGTCGTAGCAAACCGTTTAAGTGAAGTCTCAGAATGGAAAGTATTACTAGTGGAAGCTGGAGGAAATCCTACTTTAACTACAGAGATACCACAAGTATTTTACAACAACATGGGAACTAAAGAAGATTGGAATTACAAGACCGAACCGCAATCTGGCGCATGTCTCAGTTATAACAATAAAGCATGCGCCTGGCCTAGAGGAAAAACTCTAGGTGGAACCAGTAGTATCAATGCTCAATTTTATGTCAGAGGAAACAAATTAGACTACAATGAATGGGGAGACAACGGCGAAACAGATACTTTCAAACAAGCAGGATTACATTTAGAATGGTTTAAGATACCAGCATGTGATAGCCTTGATAAAACAAGTGACGAATTTTTGGAGTGCGTTTCAAGAGAGTTAACGTTTTCTTTGTATCACCCAACGGGCACGGTCAAAATGGGACCACAGGACGATCCCACAGCAGTAGTGACACCTGATTTAAAAGTACGAAATATCGAAAATTTAAGAGTAATCGATGCTGGAATTATGTATTCGATTGTCAGAGGTAATACCAATGCACCAACAATCATGATTGGAGAAAAAGGTGCAGAGCTTATAAAGAAATATTGGCGCAACACTGTCGTATAA
Protein
MWACDPTFTSTVMDSYGDVVGSTFAQALTSFLAAQCALVGDHLWPEDAIDSVVNGSSYDFVVVGAGSAGSVVANRLSEVSEWKVLLVEAGGNPTLTTEIPQVFYNNMGTKEDWNYKTEPQSGACLSYNNKACAWPRGKTLGGTSSINAQFYVRGNKLDYNEWGDNGETDTFKQAGLHLEWFKIPACDSLDKTSDEFLECVSRELTFSLYHPTGTVKMGPQDDPTAVVTPDLKVRNIENLRVIDAGIMYSIVRGNTNAPTIMIGEKGAELIKKYWRNTVV

Summary

Cofactor
FAD
Similarity
Belongs to the GMC oxidoreductase family.
Pfam
PF00732   GMC_oxred_N        + More
PF05199   GMC_oxred_C
Interpro
IPR036188   FAD/NAD-bd_sf        + More
IPR007867   GMC_OxRtase_C       
IPR000172   GMC_OxRdtase_N       
IPR012132   GMC_OxRdtase       
SUPFAM
SSF51905   SSF51905       
Gene 3D
PDB
4H7U     E-value=5.47293e-14,     Score=187

Ontologies

Topology

Length:
279
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.21626
Exp number, first 60 AAs:
0.18573
Total prob of N-in:
0.04483
outside
1  -  279
 
 

Population Genetic Test Statistics

Pi
189.781305
Theta
186.283542
Tajima's D
0.209172
CLR
0.340202
CSRT
0.433028348582571
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号