SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09587
Pre Gene Modal
BGIBMGA012836
Annotation
PREDICTED:_uncharacterized_protein_LOC103942506_[Pyrus_x_bretschneideri]
Location
Bomo_Chr16(+):4852479-4856140      View in EpiBrowser
Location in the cell
Extracellular   Reliability : 1.436 Nuclear   Reliability : 1.648
 

Sequence

CDS
ATGTACAGTGCTCGCGCTTATCAGCTGGAAAGAAACCAGGAACAAGAGCCAACTATGGGTGACCTTTTAGCTTATTTGGACAAGTGTGCCCTGGCGCTTGAAAACACTGACGTCAAGCAAGATGTTGCAGCTCCAATAACTGCCAAGGGCAGAGTAAGTTTAGCAGCCACGGCCAAGCCTGCAATGGACTGCATCTACTGTAAGTGCAAGCACAAGTTATTTTCTTGTCAAAAATTTAAATTATTACCTTCCAAAGAAAGAGTAGCCTTCAGTAAGGATAAGAATTTATGCCACATCTGTCTCAACATACATAATGGCAAATGTAAATACCACTTTAGGTGCGGAATATGTAAAGGACAGCATAACACCCTCCTGCACCTAGAGCAAGTTGAGCCAGAACCAGTGGTTCTCCATTCCGGAGGCTGCACTAGTGACAACATTTTAATTCCTACAGCTCGGGTTAAGTTGTTTTCCAAAATTGGCAGGGAAGTGCATGTAAAATGTATTCTTGATTCTGGTTCTCAAGTTTCACTCATTACTACAAAGGCTGTAGAAGTATTAGGTTTCACACCTCATCGCAGTGATATCAATTTAATCGGGGTAACTGAAAACAAAAGCAAAGTAAGCTACTGTATTCCTTTACAAGTTCATTCTCTGACGTCCTCATTCACTACACTTGTTTACTGTCATGTGGTAGACAAAATAACTTGCAACCTGCCACAAAAAGAGGTTAACTTGCAAGACATATCCATACCAACAGGAATCACATTAGCCGATACCACCTTCAATAAGCCTTCAGAGATAAATATGCTGATAGGTGCAGATGTATTTTTTCAAATAATACAGCCGCTTGAGAAACCATTACCCTTATGTGGTAGCAATGACCAGCAGCAGCCATCTTCTCCATATATATTCAACATCAGGTTCGGACACGTTATAGCTGGAGCCACGGCATCACACATTATAAAAAATCAGGTTGTATCACTTGTATGTGCTAAATGTGACATAGATCTAAATGATCGCATTAAAAAGTTCTGGGAGGTGGAGCACGTTCCAGAGTTATTAAAAGAGGATGATTCAGAACAACAGCGGTCAGAGCAAATTTTCACAAAGTCAGTCAAACTAGAAAATAATAAGTTCACCGTTGACTTACCCTTAACCCACAAATTTCTTGAAGCTAAACGTCAATTGTGCCAGTTGTTAAGCTATGGTAGTTTTAATCTGCATAAATGGGCTTCCAATACACCCAGTACTTTATCTGACACACCTGAAACTGAACAACAGTTCAGCAAGCTTTATCTTGAAAAGGATAGTTTTAGCATGAAAGCTTTGGGTATCACTTTAGACGTTAAAAAAGATTGCTTCACCATAAGCAGCCCAAAACCCTTTCAAGGCTCTAAGATCACAAAGAGAGAGGTTTTGAGTTATATTTCAAGATTTTATGATCCTATGGGTTTTGCTAGCCTTATTATAATAAAGGCCAAAGACATAATACAAAAAATATGGTCTCATAACTTAGGTTGGGACGAACGCTTACCTAATGATTTAGTAAATGATTTGCTACAATTTGCTAATAATTTAGCTGCGATTCCTCCTATCAATCTAGATAGATATATAAACACCAAAAGTGCAGCTTCGGTGCATTTGATTGGATTCTCTGATGCCTCCAGTACTACTGGCTATGGGTGCTGTGCATACCGTGTGGTCGACATAACAGCATTGGCTTGGATAAAAACTGATTTAACTAAAATGCAGGCGTACGTTGCGAATAGAGTTAGTGTTATTCAGCAAAAAACAAAAAATTGGTGCTGGCTATATGTACCATCATCAGACAACCCTGCTGACCTGATAAGCAAAGGTATCAACCCTCCTGAGCTTCCTAATTGCGCACACTGGTGGCAGGGACCCAACTTTTTGCAGTGTGAGTATGAATTTGATGTAGAAAACATAAATTTACCTACAAATTTACCCGAGATGAAAGCAGAGAAGTCATCGCAAGAAAAGGTAATACTTACTGCAGCTGCTGACTCCAATATCTTCTAG
Protein
MYSARAYQLERNQEQEPTMGDLLAYLDKCALALENTDVKQDVAAPITAKGRVSLAATAKPAMDCIYCKCKHKLFSCQKFKLLPSKERVAFSKDKNLCHICLNIHNGKCKYHFRCGICKGQHNTLLHLEQVEPEPVVLHSGGCTSDNILIPTARVKLFSKIGREVHVKCILDSGSQVSLITTKAVEVLGFTPHRSDINLIGVTENKSKVSYCIPLQVHSLTSSFTTLVYCHVVDKITCNLPQKEVNLQDISIPTGITLADTTFNKPSEINMLIGADVFFQIIQPLEKPLPLCGSNDQQQPSSPYIFNIRFGHVIAGATASHIIKNQVVSLVCAKCDIDLNDRIKKFWEVEHVPELLKEDDSEQQRSEQIFTKSVKLENNKFTVDLPLTHKFLEAKRQLCQLLSYGSFNLHKWASNTPSTLSDTPETEQQFSKLYLEKDSFSMKALGITLDVKKDCFTISSPKPFQGSKITKREVLSYISRFYDPMGFASLIIIKAKDIIQKIWSHNLGWDERLPNDLVNDLLQFANNLAAIPPINLDRYINTKSAASVHLIGFSDASSTTGYGCCAYRVVDITALAWIKTDLTKMQAYVANRVSVIQQKTKNWCWLYVPSSDNPADLISKGINPPELPNCAHWWQGPNFLQCEYEFDVENINLPTNLPEMKAEKSSQEKVILTAAADSNIF

Summary

Uniprot
H9JTH4   A0A0L7LFJ2   A0A0L7KQ40   A0A2H1VXK6   A0A2H1WZP8   A0A182WES7   + More
A0A182YRW0   A0A1B0FV44   A0A0L7LCN8   A0A182WI52  
Pubmed
19121390    26227816    25244985   
EMBL
BABH01003797    BABH01003798    JTDY01001392    KOB73986.1    JTDY01007484    KOB65166.1    + More
ODYU01005059    SOQ45565.1    ODYU01012271    SOQ58488.1    AJWK01010341    AJWK01010342    AJWK01010343    AJWK01010344    JTDY01001686    KOB73159.1   
Proteomes
UP000005204    UP000037510    UP000075920    UP000076408    UP000092461   
PRIDE
H9JTH4   
Pfam
PF05585   DUF1758        + More
PF03564   DUF1759
PF01223   Endonuclease_NS
PF18701   DUF5641
PF05380   Peptidase_A17
PF12259   Baculo_F
PF17921   Integrase_H2C2
Interpro
IPR008737   Peptidase_asp_put        + More
IPR005312   DUF1759       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001604   DNA/RNA_non-sp_Endonuclease       
IPR040255   Non-specific_endonuclease       
IPR022048   Envelope_fusion-like       
IPR040676   DUF5641       
IPR008042   Retrotrans_Pao       
IPR001995   Peptidase_A2_cat       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR001878   Znf_CCHC       
SUPFAM
SSF50630   SSF50630       
Gene 3D
2.40.70.10     3.30.420.10    
ProteinModelPortal
H9JTH4   A0A0L7LFJ2   A0A0L7KQ40   A0A2H1VXK6   A0A2H1WZP8   A0A182WES7   + More
A0A182YRW0   A0A1B0FV44   A0A0L7LCN8   A0A182WI52  

Ontologies

KEGG
NA   
GO
GO:0016787   GO:0046872   GO:0003676   GO:0016021   GO:0004190   GO:0008270  
PANTHER
PTHR13966  

Topology

Length:
680
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02797
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00066
outside
1  -  680
 
 

Population Genetic Test Statistics

Pi
161.087559
Theta
155.827713
Tajima's D
0.093944
CLR
263.714471
CSRT
0.386980650967452
Interpretation
Uncertain
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