Silkworm Genome Informatics Database

Gene

KWMTBOMO09585

Pre Gene Modal

BGIBMGA013000

Annotation

PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]-like_[Bombyx_mori]

Location

Bomo_Chr16(-):4836605-4841018 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.015

CDS

ATGTGGACGTGTGATCCGGCGTTGACTTCTAATATCGTGAACAGTTATCATGCAACAGGGCCGATATTCATGCAGGCCCTGGCCACTTTCTTCGCGGCGCAGTGCTCTATTGCCGGCGATCATCTGTGGCCGGAAGACGCTATCGAGGAAGTTGTCAAAGATCCATACTATGATTTTATCGTAGTGGGAGCAGGATCCGCGGGTGCTGTAGTCGCAAACCGTCTTAGCGAGGTATCGAAATGGAAAGTACTGTTGGTTGAAGCTGGAGGGAATCCAACGTTGAACACAGAGATACCGCAAGTTTTCTTCAACACTTTTGGGAGTGATGCAGACTGGGCATATACGAATGTACCACAACCAAATGCATGTCGCGGTTATAAATCTAATAGTTGTACGTGGCCCAGAGATTCCACAGCCACTAGTCCAGATATGCAGTTTCACCACGTCGTGTTTCCCCCAAATGTACATCTTTTGTTGGACATGTTCGAAAAACATGGCTTAAAGGAAAACATTGTTCAGCAATTCAGAGAACTTAACAAAGACAATATTATAATTTTGATAGCAGCGACGTTATTAAAACCTAAAAGCAAAGGAAAGATAATTCTTAAAAGTAAGAACCCTTTTGAGTATCCCCTTATTTATGCAAATTACTTCGACGATCCCGAGGATATGAAAACATTATTAAGAGGAATAACACAGTACGTTTTTAAATTAGCAGCCACAGATTCCTTTAAGGCAAGCGGTCTACAATTAGATTGGTTGAAACTTGAAGCTTGTGAAAAGTATAATACCGAAAGTAATGAATTTTTAGATTGTTATTCGAGAGAAATGACAATTTCTTTGTATCACCCAACAAGCACAGTCAAAATGGGACCAGATAGTGATTCTTCGGCAGTTGTAAACTCAGAGTTGAAAGTCAGGAAAGTACAAAAATTGAGGGTTATCGATGCCAGTATAATGCCAGATGTTTTAAGAGGCAATACTAATGCACCGACAATAATGATTGGAGAAAAGGGTGCAGATCTAATCAAAGAATTTTGGTTAAAACATACGGAGCTGTGA

Protein

MWTCDPALTSNIVNSYHATGPIFMQALATFFAAQCSIAGDHLWPEDAIEEVVKDPYYDFIVVGAGSAGAVVANRLSEVSKWKVLLVEAGGNPTLNTEIPQVFFNTFGSDADWAYTNVPQPNACRGYKSNSCTWPRDSTATSPDMQFHHVVFPPNVHLLLDMFEKHGLKENIVQQFRELNKDNIIILIAATLLKPKSKGKIILKSKNPFEYPLIYANYFDDPEDMKTLLRGITQYVFKLAATDSFKASGLQLDWLKLEACEKYNTESNEFLDCYSREMTISLYHPTSTVKMGPDSDSSAVVNSELKVRKVQKLRVIDASIMPDVLRGNTNAPTIMIGEKGADLIKEFWLKHTEL

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

A0A034VNI0 A0A3Q0IZ08 A0A1W4WBV0 W8AKH0 A0A0M4F9F9 B4M8F7 + More
B4R3D4 B4L268 Q9VY08 B4PW80 Q6NR10 A0A3B0K5E1 B3NUX7 B4MT99 Q29IS8 A0A1A9WC57

Pubmed

25348373 24495485 17994087 10731132 12537568 12537572 + More
12537573 12537574 16110336 17569856 17569867 26109357 26109356 17550304 15632085

EMBL

GAKP01015844 JAC43108.1 GAMC01020243 JAB86312.1 CP012528 ALC48845.1 + More
CH940653 EDW62433.2 CM000366 EDX18505.1 CH933810 EDW06808.2 AE014298 BT057975 AAF48398.1 ACM16685.1 CM000162 EDX01711.1 BT010274 AAQ23592.1 OUUW01000003 SPP78678.1 CH954180 EDV47075.1 CH963851 EDW75338.1 CH379063 EAL32573.3

Proteomes

UP000079169 UP000192221 UP000092553 UP000008792 UP000000304 UP000009192 + More
UP000000803 UP000002282 UP000268350 UP000008711 UP000007798 UP000001819 UP000091820

PRIDE

Q9VY08 Q6NR10

Pfam

PF00732 GMC_oxred_N + More
PF05199 GMC_oxred_C

Interpro

IPR036188   FAD/NAD-bd_sf        + More
IPR000172   GMC_OxRdtase_N
IPR007867   GMC_OxRtase_C
IPR012132   GMC_OxRdtase

SUPFAM

SSF51905 SSF51905

Gene 3D

3.50.50.60

ProteinModelPortal

A0A034VNI0 A0A3Q0IZ08 A0A1W4WBV0 W8AKH0 A0A0M4F9F9 B4M8F7 + More
B4R3D4 B4L268 Q9VY08 B4PW80 Q6NR10 A0A3B0K5E1 B3NUX7 B4MT99 Q29IS8 A0A1A9WC57

PDB

3NNE E-value=3.43275e-18, Score=224

KEGG

101741394 no KO assigned | (RefSeq) glucose dehydrogenase [FAD, quinone]-like

GO

GO:0016021 GO:0050660 GO:0016614 GO:0034976 GO:0045455 GO:0016491 GO:0016020 GO:0016740 GO:0006108 GO:0030060 GO:0016615 GO:0000049 GO:0016876 GO:0055114

Length:

353

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.60168999999998

Exp number, first 60 AAs:

4.38856

Total prob of N-in:

0.20605

outside

1 - 353

Pi

190.913111

Theta

146.282368

Tajima's D

0.688743

CLR

0.357843

CSRT

0.572671366431678

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics