Gene

KWMTBOMO09581

Annotation

PREDICTED:_uncharacterized_protein_LOC105398779_[Plutella_xylostella]

Location

Bomo_Chr16(-):4671356-4673691      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.403

CDS

ATGATGGTATCTTGTCTGGTCATACCACATATAACAAATAGATTACCTAACGTCGAAATAGACATGTCTACGTTGAACTTACCTGCAAACATTGAGTTGGCTGATCCAAGCTTTTTTAATCCCTCTGATATTCATATGTTGTTAGGGGCAGATGTATTCTGGGAGATCGTTTATGGTCATCAGATTAAGCTTGGGCGAAATAAGCCTACTCTCCAAGAATCACGATTAGAAAATCCCGATGTAGCGAACGTTATTGAACATGATTTCTACGTCGACGACTTAAATACTGGGTCAAGTTCCAAAGAGAAACTGCAAAGTACGATAAAAGGAGTAGTAGAGAAGTTGTCTGAAGCTTGTTTCCCGTTGCGTAAGTTTCGCACAAATGTTCCTGAAATCTTTGATGACATTTCAGTTACAAAACAAAGCCAAGACTTTTGTAAGGACTCTACAGTACTGGGACTGAATTGGTCACCTGAAACTGATACGTTGCGTTTTCTTACTAAGCTTGAATGTAATCTTCCAATTACTAAACGGAATATTCTTTCAGTGTCGTCAAAATTATTTGACCCGCTTGGTTTGCTGTCCGCTACGACAATTATTCCGAAAACTTTGCTGCAGAAATTGTGGCTGCTCAAAAATGGATGGGATGATCCTATACCAGATCAAATCAAAGCTGAGTGGCAGGAGTTCTTAGCTAATTTGAATCAGTTGTCCACTCTTGAGATCCCGAGGCACGTCATTTGCCAAGCTCCAGACAATGTAGAATTACACTGTTTTACTGATGCCTCGCAGATGGCCTACGGTGCATGTTTGTATCTTAAATCTACAGACAATGTAGGTAAGGTTACAGTTCACCTTTTTTGTGCCAAGGCTAAAGTGGCTCCACTGAAGCCGGAACTAACTATTCCTCGGCTAGAGTTGATGGGTGCTTTGTTAGGTGCTCGATTGCTGGCTAAGGTGGTACAGTCGTTAAGCTGTAAAGACATTAAAATATCGCGGTGTTTCCTATGGACGGATTCAACAATCGTCTTGGGATGGATTCATTCTGAACCAAAGACGTTGAAAACGTTTGTTTGTAACCGAATAGAGGAAATTCGTGAACTTACCTCTGAATATGAGTGGAGACATGTACCTACTCACAGCAATCCAGCAGACCTTGCCTCTCGAGGTGTAAAGCCGCAACAACTGAAAGAAAACAACCTGTGGTGGAACGGTGCTCCCTTTCTGATGCAGCCAGAGGGCGAATGGCCAGGTCATCACATAGTGCCTACCACACTTCCTGAAACGAAGTAA

Protein

MMVSCLVIPHITNRLPNVEIDMSTLNLPANIELADPSFFNPSDIHMLLGADVFWEIVYGHQIKLGRNKPTLQESRLENPDVANVIEHDFYVDDLNTGSSSKEKLQSTIKGVVEKLSEACFPLRKFRTNVPEIFDDISVTKQSQDFCKDSTVLGLNWSPETDTLRFLTKLECNLPITKRNILSVSSKLFDPLGLLSATTIIPKTLLQKLWLLKNGWDDPIPDQIKAEWQEFLANLNQLSTLEIPRHVICQAPDNVELHCFTDASQMAYGACLYLKSTDNVGKVTVHLFCAKAKVAPLKPELTIPRLELMGALLGARLLAKVVQSLSCKDIKISRCFLWTDSTIVLGWIHSEPKTLKTFVCNRIEEIRELTSEYEWRHVPTHSNPADLASRGVKPQQLKENNLWWNGAPFLMQPEGEWPGHHIVPTTLPETK

Uniprot

A0A194RGQ8   A0A2H1VIL7   A0A194RAG7   A0A2H1VWV5   A0A194QJ48   A0A0N1IPF2   + More
V5GY50   A0A0N0PBK0   A0A2A4JBY8   A0A182YRT4   A0A3S2N9P3   A0A2A4IUY1   A0A182X947   A0A224XG39   A0A2H1WRL5   A0A2H1WM60   A0A2A4IUL3   A0A2A4JM97   A0A0J7K2B3   X1WPD9   X1XR65   A0A194RI04   A0A1Y1MY22   E9J9Y8   X1X1I2   X1X028   A0A2H1VIW8   X1WNM7   X1WNT8   X1X7H4   A0A1I8MFD0   X1WVS2   A0A2S2R8A5   J9JWX5   A0A2H1X027   X1WWR0   A0A1Y1N4T1   X1WL73   J9K774   X1WVV7   X1XTZ9   A0A2S2P3E6   A0A182HA33   A0A1Y1L2Y2   X1WV59   A0A0J7KBZ0   A0A2S2NLW5   X1XTY9   A0A1S3DQE7   W8ANH7   A0A0J7KBV8   J9KLD6   A0A0J7K7S0   A0A2S2P9U8   A0A023F0J1   A0A2S2PLU2   A0A2S2NCU7   A0A0J7KCR2   A0A069DYA1   K7J7V9   J9KD60   A0A1Y1NAD1   A0A2L2YSX3   A0A2S2QQM0   A0A1Y1MTT1   A0A3S2TB02   A0A1S3DCY4   G2GY84   A0A182YRW0   J9LVB4   X1WN86   A0A1U8N896   A0A1B6GMH9   X1XEA7   J9K4R2   A0A2S2PFV9   A0A2S2QB76   X1WVK5   J9LHB7   X1WK09   A0A182N2X5   W8BVE4   A0A0J7KGI8   K7JBZ1   X1WL76   A0A182I0G9   A0A1W7R6I7   A0A0J7ND98   J9KV52   A0A0C9PIT9   K7JBZ2   J9K169   J9JLG6   A0A1B0D8P4   A0A0J7N314   A0A0J7JWZ4   J9LH75   A0A1W7R6S6   A0A0J7KHQ6   A0A1W7R6B7  

Pubmed

26354079    25244985    28004739    21282665    25315136    26483478    + More
24495485    25474469    26334808    20075255    26561354    21948522    25893780   

EMBL

KQ460211    KPJ16510.1    ODYU01002772    SOQ40675.1    KQ460500    KPJ14270.1    + More
ODYU01004932    SOQ45315.1    KQ458793    KPJ04955.1    KQ460545    KPJ14069.1    GALX01003138    JAB65328.1    KQ460970    KPJ10166.1    NWSH01001945    PCG69607.1    RSAL01000402    RVE41913.1    NWSH01006923    PCG63188.1    GFTR01008874    JAW07552.1    ODYU01010476    SOQ55616.1    ODYU01009575    SOQ54097.1    PCG63186.1    NWSH01001014    PCG73111.1    LBMM01016388    KMQ84439.1    ABLF02006985    ABLF02045454    ABLF02054831    KQ460205    KPJ16960.1    GEZM01018702    JAV90048.1    GL769615    EFZ10365.1    ABLF02018584    ABLF02039341    ABLF02042408    ABLF02065916    ABLF02041599    ODYU01002816    SOQ40773.1    ABLF02042806    ABLF02009451    ABLF02008229    ABLF02041500    GGMS01016389    MBY85592.1    ABLF02003232    ABLF02003233    ODYU01012312    SOQ58566.1    ABLF02022909    ABLF02042631    GEZM01012999    JAV92824.1    ABLF02041505    ABLF02023723    ABLF02022815    GGMR01011253    MBY23872.1    JXUM01030959    KQ560903    KXJ80414.1    GEZM01068861    GEZM01068860    JAV66730.1    ABLF02041731    LBMM01009964    KMQ87756.1    GGMR01005535    MBY18154.1    ABLF02022912    ABLF02038819    ABLF02051942    ABLF02060282    GAMC01020552    JAB86003.1    LBMM01009941    KMQ87772.1    ABLF02013940    ABLF02036313    ABLF02066938    ABLF02066950    LBMM01012392    KMQ86241.1    GGMR01013586    MBY26205.1    GBBI01004211    JAC14501.1    GGMR01017803    MBY30422.1    GGMR01002340    MBY14959.1    LBMM01009608    KMQ87996.1    GBGD01000063    JAC88826.1    AAZX01023505    ABLF02041863    GEZM01008015    JAV94881.1    IAAA01040237    LAA10530.1    GGMS01010815    MBY80018.1    GEZM01021505    JAV88969.1    RSAL01001808    RVE40681.1    AGCA01000168    EGY29296.1    ABLF02004142    ABLF02041590    GECZ01006169    JAS63600.1    ABLF02006652    ABLF02006653    ABLF02026952    ABLF02038350    ABLF02038362    ABLF02007122    ABLF02033517    GGMR01015704    MBY28323.1    GGMS01005792    MBY74995.1    ABLF02023600    ABLF02041631    ABLF02022040    ABLF02056888    ABLF02065856    GAMC01013466    JAB93089.1    LBMM01007859    KMQ89359.1    AAZX01023184    APCN01002077    GEHC01000869    JAV46776.1    LBMM01006539    KMQ90520.1    ABLF02015610    ABLF02015611    ABLF02026843    ABLF02057498    ABLF02060119    ABLF02062416    ABLF02064495    GBYB01000873    JAG70640.1    ABLF02024568    ABLF02030698    ABLF02030705    ABLF02030709    AJVK01027627    LBMM01011051    KMQ87060.1    LBMM01024307    KMQ82592.1    ABLF02011447    ABLF02011449    ABLF02058523    GEHC01000870    JAV46775.1    LBMM01007394    KMQ89769.1    GEHC01000939    JAV46706.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000076408    UP000283053    UP000076407    + More
UP000036403    UP000007819    UP000095301    UP000069940    UP000249989    UP000079169    UP000002358    UP000189702    UP000075884    UP000075840    UP000092462   

Pfam

PF17921   Integrase_H2C2        + More
PF05585   DUF1758
PF03564   DUF1759
PF18701   DUF5641
PF05380   Peptidase_A17
PF00665   rve
PF02945   Endonuclease_7
PF00078   RVT_1
PF05485   THAP

Interpro

IPR012337   RNaseH-like_sf        + More
IPR008042   Retrotrans_Pao       
IPR001584   Integrase_cat-core       
IPR005312   DUF1759       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR001878   Znf_CCHC       
IPR001995   Peptidase_A2_cat       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001606   ARID_dom       
IPR038563   Endonuclease_7_sf       
IPR004211   Endonuclease_7       
IPR000477   RT_dom       
IPR001969   Aspartic_peptidase_AS       
IPR006612   THAP_Znf       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       

Gene 3D

3.30.420.10     2.40.70.10     3.40.1800.10    

ProteinModelPortal

A0A194RGQ8   A0A2H1VIL7   A0A194RAG7   A0A2H1VWV5   A0A194QJ48   A0A0N1IPF2   + More
V5GY50   A0A0N0PBK0   A0A2A4JBY8   A0A182YRT4   A0A3S2N9P3   A0A2A4IUY1   A0A182X947   A0A224XG39   A0A2H1WRL5   A0A2H1WM60   A0A2A4IUL3   A0A2A4JM97   A0A0J7K2B3   X1WPD9   X1XR65   A0A194RI04   A0A1Y1MY22   E9J9Y8   X1X1I2   X1X028   A0A2H1VIW8   X1WNM7   X1WNT8   X1X7H4   A0A1I8MFD0   X1WVS2   A0A2S2R8A5   J9JWX5   A0A2H1X027   X1WWR0   A0A1Y1N4T1   X1WL73   J9K774   X1WVV7   X1XTZ9   A0A2S2P3E6   A0A182HA33   A0A1Y1L2Y2   X1WV59   A0A0J7KBZ0   A0A2S2NLW5   X1XTY9   A0A1S3DQE7   W8ANH7   A0A0J7KBV8   J9KLD6   A0A0J7K7S0   A0A2S2P9U8   A0A023F0J1   A0A2S2PLU2   A0A2S2NCU7   A0A0J7KCR2   A0A069DYA1   K7J7V9   J9KD60   A0A1Y1NAD1   A0A2L2YSX3   A0A2S2QQM0   A0A1Y1MTT1   A0A3S2TB02   A0A1S3DCY4   G2GY84   A0A182YRW0   J9LVB4   X1WN86   A0A1U8N896   A0A1B6GMH9   X1XEA7   J9K4R2   A0A2S2PFV9   A0A2S2QB76   X1WVK5   J9LHB7   X1WK09   A0A182N2X5   W8BVE4   A0A0J7KGI8   K7JBZ1   X1WL76   A0A182I0G9   A0A1W7R6I7   A0A0J7ND98   J9KV52   A0A0C9PIT9   K7JBZ2   J9K169   J9JLG6   A0A1B0D8P4   A0A0J7N314   A0A0J7JWZ4   J9LH75   A0A1W7R6S6   A0A0J7KHQ6   A0A1W7R6B7  

KEGG

NA   

GO

GO:0015074   GO:0003676   GO:0008270   GO:0004190   GO:0003677   GO:0016021   GO:0005515   GO:0016020   GO:0016740   GO:0006108   GO:0030060   GO:0016615   GO:0000049   GO:0016876  

Length:

430

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00886

Exp number, first 60 AAs:

0.00121

Total prob of N-in:

0.00229

outside

1  -  430

 

 

Pi

114.191269

Theta

144.21043

Tajima's D

-0.873764

CLR

60.930482

CSRT

0.161741912904355

Interpretation

Uncertain