Gene
KWMTBOMO09580
Pre Gene Modal
BGIBMGA009215
Annotation
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
Location in the cell
Nuclear Reliability : 3.054
Sequence
CDS
ATGCGACACCATCAAACCAAAAAGCAAGTCGAGGGACCGTGGACGCCGGCTGCTAGAATAAGTCACACGAAAGAGCAATCTGCAAAAGATAATATTATGAAATATAATAAATCTAGAGGCAATAAAACCGTGGCGTCGCGGGACGCGAACCAAGCGTCACGTGATAACATAATTCCCAACTGGGGTTCACAAAGCGCGGGAATTCGATCGCAGCCAAAACCAAACCAAGAACATCGACCACGAGTAGAACCGAAGCCGACCGCCATACTAACAAGTAACATGTTTTCACCGCTTGCTTTTGATGAGGAAGAACGAGATAGGGAATCTGACGATACCGTCTCAGTATTGAGTGAGGGTGGGGGCACCAAGCGACGACGTGTTCATAAGACACGGGCGGCATCTATTGGTGTCTCACCAGCGTATCTCCCTTTTGACAACATGGGACAAAGCAGTGCTCCAAATGGATCAAATAAAAATTTTACGAAGGATACAAGAACAAAGCGATATCCTCCATTTATATGTGAATATGACGCATGGATCACGGATAAAAACGAGTGGAAGGCGGCGAATGAAATTGCTCGAGTGAGTAATTGTGAAATACGCGCTAATCCAAAGAGCAAGAAAATAACATTTATTCCAAAAAACAAGGAAGCTTATGAAGCCATACAGAGGCGACTAAATGAAAACCCAGACAAATATAATTACTACACATACGGATGCAAAGACGATCATCGCCCGGCAAAGAAGCTAATAGCTAAAGGGGTCCGCGTCGAAGGTTACACAGAGGAAGAAATCAATGCCGATATTCTTGCAAGATATGGAATCAAGATGGAACGGGTAATTATTATGAAAAATTCAGCGTTGATTCTCATCTTCCCAAGTGAAACTGACATGCGAGTAGCCCGCGATATAAAGTTTATCTTAAGTCAGCGTGCTACAATCGAGAAATACAAGGTACGAGACACCGCGGTGACACAATGCAAGCGGTGCTGGCAATTTGGTCATGTGCAATCTCATTGCCGGCGTCCAGAGCAACCAGACTCTGTTGAACAACGCGAAGATGGAGATGTGTGGCATGTGTGCTACAACTGTCACGAAATTGGTCATACAGCAAGACAGGCAAAGTGCCCGCTATTCCAGTTAGAAATAAAAAAACAGAAAAACAGGCGACAGGCTTTCGTCAAAAATAATGAAGGACTTACACTACCCACAAAACGTATGATAGAAGCTTCGAATATAAAAGCAGCCCCAGCCACACGGGTCGACAGAACTAGCTATGCAGCAGCAGCAGGTGCCTTAAGTAGCCCTAAAACCACACGCAAGCCCCCTGAGAATGAATCCAAGGCAAAGGCGTTACCTGACTTACTCAGCAAAGCAAAAGAGTTGATGAAAAGCGTGGATGACGTTGATCGTCGTATTGAGGGAGTAGCTATCAGGCTAGAAACAATTGACGGTGGTATCATCGTGCGAGGGTTGTATAATCCACACTTACGTTTCTATCAAATTCGGGCGGACTGGGAAGCTCTCTTGGACACTCAAACACAAGCCGCAGGTGCGCTGGTGCAGCTGGCCATTGGCAACAGAGAGGCAAAATTGGTGCATACTGGCTTACCATCTCGACCCTGCCATCAAGGAAACGGTATACTCGATGTCGCACTGGTGACACAAGAGGCCATGGAGTACACTTATCGAACGAAGCAACTCGATTCTATCTCGTCAGATCACTATCCGTGGCAATTGGAAGTTGATATAGAGGTGCACGAACATGTGCTACTGAGGCGAAAGATGAACAGCATTACTGAATCTAAGGAGTCTCGCATCAAATTCCAAGAGCTAGTCGAAGCAAATCTTCCAGTAATTGTGCCAACCACTGATGCTGAGGCAGATTCATGCGTCGATAACTTGGAAAATGTACTCACTGCGGCATTAGATGAGATGGCGCCGCTACGAGAGTTAATACGACGGGAGGAACTACCAATAAACATCCAATACATGATACAACATCGCAACCGAAGCAAACTAAAAGCAAAAAATGCACCAAGAGGACATATTCTCCGTCGGACATACAACGCTGCAAAGACCATACTGAAGCAAGCGCTGCAAGAATATCGAGAGACCCAATGGAACAACGTCATTGATAGTCCTGAAAACAACAATGCTAAGATGTGGACTATTCAACGCTCTCTGAAGATCAAGCCTCAGCGTCTACCTGATCTACATGGAGTTGTAACTGAAGAAGAAACAATCAATACTCTGGTTGACACGGCAATAGTAAAAGAAGCAAATGTGGATGACACTCATAAAAATTCTGAGACCTTTACCCCATACCAACCGCTGGCCGAGACCGACGTAGACGAGGTAATACGAGCTCTTCGCTTCTTCAAGAACAAGAAAGCGCCAGGCCCCGATCAACTAAGGGCTGACGCAATAAAACTTGCTGGCCCAGCATATTATACCGCACTGACAAACACAATAAACTACACTCTACGCACAGGATATTATCCAAGCCGATGGAAGCTGGGTGACTGTATCTTCTTACACAAACCAGGCAAACCACATACCGAAGCTGCCTCGTATCGTCCCATTATGTTACTTAACATTATGGGTAAGCTGTGCGAACGAGTTATGTATAGCAGAGTTCTCTCAGAAGTGAACCGTTTGCATCTTATCCCAGAATACCAGCACGGTTTTACAAAAAATAAAGGGACTGGTACCCAAATTTTACGAACTGGTAAGGTTATTACAGACGCTTTGGCAGAGGGCAACAGTGTAGCGATGATTTCTACTGATCTCAGTAAAGCTTTCGATTCCATAAATCATGCAGGGCTAAGCAAGAAACTGTTTAACGCTGGAATGGCAAATAATGTAATTAAGCTAATAGAGAATTACCTGAAAAATCGGGAGGCTCGTGGTAAGTACCGAACAATGTATGGAAAAAGGCAACTGATTCCGCACGGAGTACCACAGGGCTCAATTTTGGGGCCGATCCTCTTCAACTTATACATGAGTGATATCCCCAAGACCCACATCGCAGGTATCACACTCTCACAGTATGCTGATGATCTATGCATCCTGAATGAGGCTAGCCAACCAGATACAGCATCGCGGAGAGCGGCATGGGCTGCTGAGACAATTATAAACTACTACAAGGAATGGGGTCTGCAGTGCAATGTGAGCAAAACGGATTGCATAATGTTTACAAATAAACGCAAATTTAATCGCACCATACAACTTCAACATGAGGCATTACCAATAAAAAGTAACATAAAATATCTTGGAGTGCATCTCGACCAAAGATTAGTGATGAAGGAACATGTAAAAAACACAGTGAAAAAAGTAAAACAAGTGCGTGGAATGCTAGCGCCTATCATAGGATGGTATAGTAAAGTGTCCCTTGAAACAAAACTTAAAGTGATCAAAGCAACTGTTCTACCAATCATTGATTACGGCATTGTACAACTATACCCTAGGGTATGTAAGTCTAAGCTAACTGAATTAGAGAGGCAATATCGAATGGCATTGAAGACAGCGGGTAACTTTCCTCGCAATACGAGTTCAGAAGTAATCTGGGAAATGCTTGATGAGGATCCGTGGTACATACGTGCCAGGGACCTTCATGAAGATATGCTCCGCAAGTTAAAAGATCAGCAAATCCCTGGACTTACACTCCCTGGGAATAAATATGATAAACTGAACCACCATAATCCTATGTTGCCTAGCCTGCGCGCAGGTGAAATCGATTATGTTGACAAAAAAGAAAGAGGCAAACCGCTCTCCAAGCGAACGGTTCCTCCTCGTATTCCTATCCTTTAG
Protein
MRHHQTKKQVEGPWTPAARISHTKEQSAKDNIMKYNKSRGNKTVASRDANQASRDNIIPNWGSQSAGIRSQPKPNQEHRPRVEPKPTAILTSNMFSPLAFDEEERDRESDDTVSVLSEGGGTKRRRVHKTRAASIGVSPAYLPFDNMGQSSAPNGSNKNFTKDTRTKRYPPFICEYDAWITDKNEWKAANEIARVSNCEIRANPKSKKITFIPKNKEAYEAIQRRLNENPDKYNYYTYGCKDDHRPAKKLIAKGVRVEGYTEEEINADILARYGIKMERVIIMKNSALILIFPSETDMRVARDIKFILSQRATIEKYKVRDTAVTQCKRCWQFGHVQSHCRRPEQPDSVEQREDGDVWHVCYNCHEIGHTARQAKCPLFQLEIKKQKNRRQAFVKNNEGLTLPTKRMIEASNIKAAPATRVDRTSYAAAAGALSSPKTTRKPPENESKAKALPDLLSKAKELMKSVDDVDRRIEGVAIRLETIDGGIIVRGLYNPHLRFYQIRADWEALLDTQTQAAGALVQLAIGNREAKLVHTGLPSRPCHQGNGILDVALVTQEAMEYTYRTKQLDSISSDHYPWQLEVDIEVHEHVLLRRKMNSITESKESRIKFQELVEANLPVIVPTTDAEADSCVDNLENVLTAALDEMAPLRELIRREELPINIQYMIQHRNRSKLKAKNAPRGHILRRTYNAAKTILKQALQEYRETQWNNVIDSPENNNAKMWTIQRSLKIKPQRLPDLHGVVTEEETINTLVDTAIVKEANVDDTHKNSETFTPYQPLAETDVDEVIRALRFFKNKKAPGPDQLRADAIKLAGPAYYTALTNTINYTLRTGYYPSRWKLGDCIFLHKPGKPHTEAASYRPIMLLNIMGKLCERVMYSRVLSEVNRLHLIPEYQHGFTKNKGTGTQILRTGKVITDALAEGNSVAMISTDLSKAFDSINHAGLSKKLFNAGMANNVIKLIENYLKNREARGKYRTMYGKRQLIPHGVPQGSILGPILFNLYMSDIPKTHIAGITLSQYADDLCILNEASQPDTASRRAAWAAETIINYYKEWGLQCNVSKTDCIMFTNKRKFNRTIQLQHEALPIKSNIKYLGVHLDQRLVMKEHVKNTVKKVKQVRGMLAPIIGWYSKVSLETKLKVIKATVLPIIDYGIVQLYPRVCKSKLTELERQYRMALKTAGNFPRNTSSEVIWEMLDEDPWYIRARDLHEDMLRKLKDQQIPGLTLPGNKYDKLNHHNPMLPSLRAGEIDYVDKKERGKPLSKRTVPPRIPIL
Summary
Pubmed
EMBL
Proteomes
Interpro
SUPFAM
SSF56219
SSF56219
Gene 3D
PDB
6AR3
E-value=0.000350941,
Score=109
Ontologies
GO
Topology
Length:
1270
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0604300000000002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00220
outside
1 - 1270
Population Genetic Test Statistics
Pi
353.552304
Theta
181.630616
Tajima's D
2.609015
CLR
0
CSRT
0.953952302384881
Interpretation
Possibly Balancing Selection
