Silkworm Genome Informatics Database

Gene

KWMTBOMO09576

Pre Gene Modal

BGIBMGA013008

Annotation

hypothetical_protein_KGM_15612_[Danaus_plexippus]

Location

Bomo_Chr16(-):4549581-4551691 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.106

CDS

ATGATTGGAATTAGAGCATTTGAAGAAGACTACGACATTGAATATTACGATGACTTGCCGGAAAATCATTATCACAAAGAGGGAAGATCGTTTTCGTATCCCCAGAGTCCGATTATAGATTTGATTATGAAAACAGCGGCCCCTAATTATGTACCGAAAAATTCTGGAGACATTTTTGACTTTTTGAGAGATTCGTATCCGCTGCCTGGAGGACTGCACAGCCCTTATCATGAATACGATTTCGTAATCATAGGGGCGGGCTCAGCGGGCTCCGTTTTAGCTTCTAGACTAACAGAGGATAAGAACACCACGGTCTTGCTTATAGAGGCCGGGAAGCCAGAAATGATATTAACTGACATTCCAATTATGGCACCATATTTTCAATCAACAGAATATGCCTGGCAGTACTACATGGAACCCCAACCTGGAGTTTGTAAAGGTATGATCAACGGTCGTTGTTTTTGGCCGCGCGGGAAGGCGGTCGGGGGTAGCAGCGTCATCAACTACATGATATACACGCGGGGTAGACCACAAGACTGGGACAGGATCGCGGCCGCAGGGAATTATGGATGGTTTGAAAATAATTTTAATTTATTTTAA

Protein

MIGIRAFEEDYDIEYYDDLPENHYHKEGRSFSYPQSPIIDLIMKTAAPNYVPKNSGDIFDFLRDSYPLPGGLHSPYHEYDFVIIGAGSAGSVLASRLTEDKNTTVLLIEAGKPEMILTDIPIMAPYFQSTEYAWQYYMEPQPGVCKGMINGRCFWPRGKAVGGSSVINYMIYTRGRPQDWDRIAAAGNYGWFENNFNLF

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

H9JTZ6 H9JTZ5 H9JTZ4 A0A2H1W5U4 A0A2H1W5U5 A0A437BIJ6 + More
A0A437BIL7 A0A2A4JIB2 A0A212FMP4 A0A2H1VQW6 A0A194RF91 A0A437BXD9 A0A194QK24 A0A212EHV5 A0A194R0C6 A0A194PID4 A0A2W1BSS3 H9JTZ7 A0A2H1V5E5 A0A194QIN4 A0A194RJ52 E9IKG7

Pubmed

19121390 22118469 26354079 28756777 21282665

EMBL

BABH01003831 BABH01003832 BABH01003833 BABH01003834 BABH01003829 BABH01003830 + More
ODYU01006526 SOQ48459.1 ODYU01006527 SOQ48460.1 RSAL01000051 RVE50270.1 RVE50271.1 NWSH01001458 PCG71170.1 AGBW02007651 OWR55011.1 ODYU01003877 SOQ43187.1 KQ460323 KPJ15970.1 RSAL01000001 RVE55122.1 KQ458756 KPJ05260.1 AGBW02014789 OWR41062.1 KQ460883 KPJ11152.1 KQ459603 KPI92808.1 KZ149911 PZC78108.1 ODYU01000745 SOQ35996.1 KPJ05259.1 KPJ15971.1 GL763984 EFZ18940.1

Proteomes

UP000005204 UP000283053 UP000218220 UP000007151 UP000053240 UP000053268 + More

PRIDE

H9JTZ6 H9JTZ5 H9JTZ4 H9JTZ7

Pfam

PF00732 GMC_oxred_N + More
PF05199 GMC_oxred_C

Interpro

IPR036188   FAD/NAD-bd_sf        + More
IPR007867   GMC_OxRtase_C
IPR000172   GMC_OxRdtase_N
IPR012132   GMC_OxRdtase

SUPFAM

SSF51905 SSF51905

Gene 3D

3.50.50.60

ProteinModelPortal

H9JTZ6 H9JTZ5 H9JTZ4 A0A2H1W5U4 A0A2H1W5U5 A0A437BIJ6 + More
A0A437BIL7 A0A2A4JIB2 A0A212FMP4 A0A2H1VQW6 A0A194RF91 A0A437BXD9 A0A194QK24 A0A212EHV5 A0A194R0C6 A0A194PID4 A0A2W1BSS3 H9JTZ7 A0A2H1V5E5 A0A194QIN4 A0A194RJ52 E9IKG7

PDB

5OC1 E-value=1.94892e-18, Score=223

KEGG

101741114 no KO assigned | (RefSeq) glucose dehydrogenase [FAD, quinone]-like

GO

GO:0016614 GO:0050660 GO:0016021 GO:0016491 GO:0016020 GO:0016740 GO:0006108 GO:0030060 GO:0016615 GO:0000049 GO:0016876 GO:0055114

Length:

199

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07459

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.05064

outside

1 - 199

Pi

258.664659

Theta

202.941238

Tajima's D

0.776303

CLR

0.046435

CSRT

0.593570321483926

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree