SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09570
Pre Gene Modal
BGIBMGA013011
Annotation
hypothetical_protein_OBRU01_12883_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 2.705
 

Sequence

CDS
ATGACTTTGTTTAAACTAAAATCAGCGCCGATTTTGCTTATTGAAGATGATATTAACGTCAATACCTTGCCATTATTATTCGCTCTTTTAGAAGACGAAAAGAACGTGATAAATTTTCACATTTATGAACATCAGGAAGAGTTGTGGAAAGAAGCTTTTAAAAACAAAAGTAATGTCAAGGTTTACTCAGAATACCAAGATGAAAAATATGACATATATACAAAGATACCATGTACTATGATAGTAGATTCTGTTCATCAAATGTTTTATTCTCTGGGGTCAAACAAGTTTATGAAGCTATTGAAACGATTACAGGGTAATCCTTGTGTCGAAAGGATAATAATAATCTTACACAAAGACTGTATGGCACATTCATCAAAGCTGAGAATACATATGAATTACATTGCTAATGCAGTAATTAGTTTCGACAGTAATAATGTTTTGAAAGCATTGATTAATATTAAAAAAGGAGCTAAATTTATAAAAACCGAAGAAATTTTTTCATTATGCATTAAGACCAAAACATTGAATTTGACTCCTGTACCAAAAGAAACCAAGAAAGATGATGAACCAGAAAAACCATCACCAGAAAAACTTTCCACCTTTAAAATTGAAGTGGATCAGACAGAAAAACTACAGAAGTATAATCTAAAGCTTCCATATATGAGTAAGATTCATGAGGGAGAAAGTAAGATTTATTACGAGCCAGATGCTGTTGATGACTGGGATGAAGAAGATCCTGATGACGATCTTGATATTTAA
Protein
MTLFKLKSAPILLIEDDINVNTLPLLFALLEDEKNVINFHIYEHQEELWKEAFKNKSNVKVYSEYQDEKYDIYTKIPCTMIVDSVHQMFYSLGSNKFMKLLKRLQGNPCVERIIIILHKDCMAHSSKLRIHMNYIANAVISFDSNNVLKALINIKKGAKFIKTEEIFSLCIKTKTLNLTPVPKETKKDDEPEKPSPEKLSTFKIEVDQTEKLQKYNLKLPYMSKIHEGESKIYYEPDAVDDWDEEDPDDDLDI

Summary

Pfam
PF10483   Elong_Iki1
Interpro
IPR019519   Elp5       

Ontologies

Topology

Length:
253
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03076
Exp number, first 60 AAs:
0.00103
Total prob of N-in:
0.01888
outside
1  -  253
 
 

Population Genetic Test Statistics

Pi
209.660286
Theta
172.303799
Tajima's D
0.535033
CLR
169.020067
CSRT
0.528873556322184
Interpretation
Uncertain
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