SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09565
Pre Gene Modal
BGIBMGA013014
Annotation
CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]
Location in the cell
Nuclear   Reliability : 2.65
 

Sequence

CDS
ATGTCTCCGGCAGCGTCGTTTGCTGAACGATGGGCCCGCGATAACCTGTCCAGAGAAGCCACAGTAAGCGAGCTCCAAGTATTACGCCTCTTCCCGATCACTTGTGACGGAGATGAAGCAGAAGCAAGCAAGAGAGCCAGGAGATACTACAAGGCTAGGGGACCGGGCGGAATGACAGAGCTTTGGCATAAGCGACGTCCTGATGACGAGGATATTCTGTCTAGCTGTCAGGATGCATACATAATCCCGTTACGCGCAAGAAGCGTGGGTGGTCGTCGCATGACGCTGGTCAGGCTACCGGCCCCAACGGCATTGGACAGACCACTTTCGGCAAAAGCCCTGCTGTCGCGATGGCTTATGATTTTAGACATCAGGCTCCGAGAAGATCCGACTCCTGGTGAAGAAGTAGTTTTCATAGACGTGAGCGACCTTCAACCTTCGCACATTAAAAATCATTTCAGAGGAACGTACTGGAAGGACTTCGTCTGGTGCATGAAGTCTGCTTACCCGCTTCGATTCGCAGAAGTTCACGTAATTAACACGCAACGGCTCAAGACCGTCTCCTTACTGCTGCTGCATATCGGACTGTATCCGTGGAGGCGTAAAGTCGTGACTATCCACACGAATACGGAAGAAATAAATCAAGCCATGGGCATCGATTATTTCCCTACAGACGGATTGCCTTACGAGTACGGCGGGAAAGCTGGCTCTATAAAAGATCTGAACGATCAATGGACAAAAAAGTTGCTAACCAATTCGAAATGGCTGGAAACGGAAGAAAGAAAATTTTACGATACCGAATTGAGGCCGGAACTACGGACGCGCCGCCAACGTAGCGCCATGAGAACGTTGAGGAGTAACATCGGTTCATACGACATGATCACCAGAACCCACTCCTGCAGGTCGTTGAACCAGCGCGACGATTTAGACGAAGGACTTCACGGGGCGTACAGAACGCTAAAAGCAAAAACGGACAGGCCAGGGAAGAGTAAATCGTGA
Protein
MSPAASFAERWARDNLSREATVSELQVLRLFPITCDGDEAEASKRARRYYKARGPGGMTELWHKRRPDDEDILSSCQDAYIIPLRARSVGGRRMTLVRLPAPTALDRPLSAKALLSRWLMILDIRLREDPTPGEEVVFIDVSDLQPSHIKNHFRGTYWKDFVWCMKSAYPLRFAEVHVINTQRLKTVSLLLLHIGLYPWRRKVVTIHTNTEEINQAMGIDYFPTDGLPYEYGGKAGSIKDLNDQWTKKLLTNSKWLETEERKFYDTELRPELRTRRQRSAMRTLRSNIGSYDMITRTHSCRSLNQRDDLDEGLHGAYRTLKAKTDRPGKSKS

Summary

Pfam
PF00650   CRAL_TRIO
Interpro
IPR036865   CRAL-TRIO_dom_sf        + More
IPR001251   CRAL-TRIO_dom       
SUPFAM
SSF52087   SSF52087       
Gene 3D
PDB
3W68     E-value=0.00289874,     Score=95

Ontologies

GO

Topology

Length:
332
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00543
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01132
outside
1  -  332
 
 

Population Genetic Test Statistics

Pi
226.530187
Theta
161.692264
Tajima's D
1.32299
CLR
0.123798
CSRT
0.744712764361782
Interpretation
Uncertain
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