Gene

KWMTBOMO09563

Pre Gene Modal

BGIBMGA013016

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr16(-):4247924-4260765      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 4.153

CDS

ATGGCATCAACGGCGACCCTGATTCAGCCTTCCGGGGAACTGTGGAAGAAAATCCGCGAGGAATTGAATGAGGATGTCAACACCAGGGCGCAGGACTTAGCTGCCATCAAGGAGTGGCTGAGAAAGCAACCCCATCTACCAGATGAGTGGGAAGACGCGTGCCTGATGACTTTTCTCCGAGGCTGTAGCTTCTCCCTTGAGAAATGTAAAAAGAAACTTGATATGTACTTCACGATGAGGGCTGCTTGCCCAGAGTTCTTCGCGAACAGAGACGTAACCAGACCAGAGCTAATGGACCTGCTGAATAGAGCCCAAGGACCTACACTCCCTGGCTTGACGCCTCAAGGTCGACGAGTAACCATCGCCAGAGCACTGGACAAGAACCTGGACACGAACCAGCTTAATGATGTCTTCAAACTTGCAATGATGATCGGAGATGTAAGACTGCGTGAAGAAGTCGAGGGAATAGCTGGAGACGTTTACGTACTGGACGCTTCTATTCTAATGCCAAGTCACCTCGCCAAGATTTCACCAGCAGTGCTGAAGAAATTCTTCATTTGTATACAGGAAGCTTATCCAGTGAAACTGAAGGAAATACACGTTATCAACGCATCTCCCCTCGTGGATGTCGTATTCAACATTGTAAAACCATTCCTTAAAGAAAAAATGAAGAAAAGAGTGTTCTTCCACGCCGATGTGCAATGTCTTCAGGATTATATCCCTAAAGAAATTCTACCCGTTGAATTCGGAGGCAACGGATGTTCTCTTGAAGACGTGAACAAAGCTTGGATGAAGAAGCTAGAGGAGTACAGTCCTTGGTTTAAGCAACAAGAAGCTTTAAAAGCTAACGAAGCTATGAGACCAGGAAAGCCAACTAATTACGACGAACTCTTTGGTATTGATGGCTCATTTAGACAGCTGTCAATAGATTAA

Protein

MASTATLIQPSGELWKKIREELNEDVNTRAQDLAAIKEWLRKQPHLPDEWEDACLMTFLRGCSFSLEKCKKKLDMYFTMRAACPEFFANRDVTRPELMDLLNRAQGPTLPGLTPQGRRVTIARALDKNLDTNQLNDVFKLAMMIGDVRLREEVEGIAGDVYVLDASILMPSHLAKISPAVLKKFFICIQEAYPVKLKEIHVINASPLVDVVFNIVKPFLKEKMKKRVFFHADVQCLQDYIPKEILPVEFGGNGCSLEDVNKAWMKKLEEYSPWFKQQEALKANEAMRPGKPTNYDELFGIDGSFRQLSID

Uniprot

H9JU04   A0A2A4JLK9   A0A0S2Z324   A0A1E1W993   A0A2H4RMW4   A0A2H1V2T7   + More
A0A194Q6G5   A0A212FMF6   A0A2H1WHQ3   A0A3S2L872   A0A2H4RMR7   A0A3S2NT85   A0A2W1BQL9   A0A194R296   A0A3S2NHT6   A0A0S2Z3C6   I4DM93   A0A2A4JN64   I4DIS4   A0A2H4RMR9   A0A194R1G6   A0A2H4RMU2   A0A194Q0B2   Q1HQ95   A0A0S2Z350   A0A2H1V2R3   I4DIV6   S4PY20   I4DMP5   A0A2W1B842   A0A212FMH3   A0A2A4JN79   A0A212FBP0   J3JUN4   D2A5R3   A0A2H4RMQ6   A0A232ELM6   H9JU05   A0A0N0BHJ4   K7ITZ4   A0A194Q1X2   H9JU03   A0A2A3EKL1   A0A087ZQ01   A0A2H4RMV6   A0A158NWN2   A0A0L7QV98   A0A151WY48   A0A195ECA1   A0A154PFM2   A0A1Y1L6E1   A0A310SGC2   A0A3L8E2J1   E2BJ28   A0A336MFQ7   E0VHP2   A0A1B6L485   F5HKV7   A0A1D6TJS6   A0A182HSP7   A0A182P062   A0A1B6CGR6   A0A182G0T6   A0A182UXR4   A0A182LER6   A0A182XAU9   Q7QCC6   A0A182HSP6   Q178U4   B0WR71   A0A182TL25   A0A182YQJ3   Q178U5   A0A023EQY2   A0A151I5F0   A0A182FNW7   A0A151JU22   A0A182Q192   A0A182JUT9   E2A8W6   A0A182JE45   A0A026W000   A0A182M982   A0A182RS71   W5JP64   A0A182VWX1   A0A182NRL3   A0A2J7Q755   J9JJD5   A0A2S2R1Y2   A0A1J1ICM2   A0A1B0CFJ4   A0A023F5G9   A0A2H8TX43   A0A1L8DZ37   A0A1B0DII6   A0A2R7WAD2   F4WQ28   A0A0A1WYR9   A0A0K8ULV3  

Pubmed

19121390    25684408    29136137    26354079    22118469    28756777    + More
22651552    23622113    22516182    18362917    19820115    28648823    20075255    21347285    28004739    30249741    20798317    20566863    12364791    26483478    20966253    14747013    17210077    17510324    25244985    24945155    24508170    20920257    23761445    25474469    21719571    25830018   

EMBL

BABH01003855    BABH01003856    NWSH01001060    PCG72861.1    KT943554    ALQ33312.1    + More
GDQN01007486    JAT83568.1    MG434662    ATY51968.1    ODYU01000399    SOQ35119.1    KQ459582    KPI98995.1    AGBW02007651    OWR54932.1    ODYU01008739    SOQ52601.1    RSAL01000093    RVE47936.1    MG434634    ATY51940.1    RVE47935.1    KZ150073    PZC74013.1    KQ460878    KPJ11639.1    RVE47937.1    KT943552    ALQ33310.1    AK402411    BAM19033.1    PCG72852.1    AK401192    BAM17814.1    MG434623    ATY51929.1    KPJ11638.1    MG434646    ATY51952.1    KPI98996.1    DQ443157    ABF51246.1    KT943548    ALQ33306.1    ODYU01000400    SOQ35121.1    AK401224    BAM17846.1    GAIX01004053    JAA88507.1    AK402563    BAM19185.1    KZ150230    PZC71999.1    OWR54931.1    PCG72860.1    AGBW02009293    OWR51150.1    BT126949    AEE61911.1    KQ971345    EFA05407.1    MG434610    ATY51916.1    NNAY01003544    OXU19231.1    KQ435750    KOX76354.1    KPI98994.1    BABH01003854    KZ288227    PBC31792.1    MG434660    ATY51966.1    ADTU01002976    KQ414731    KOC62381.1    KQ982651    KYQ52830.1    KQ979074    KYN22850.1    KQ434893    KZC10617.1    GEZM01069094    JAV66647.1    KQ760241    OAD61294.1    QOIP01000001    RLU26595.1    GL448558    EFN84178.1    UFQT01000848    SSX27633.1    DS235171    EEB12928.1    GEBQ01021517    JAT18460.1    AAAB01008859    EGK96859.1    APCN01000318    GEDC01024699    JAS12599.1    JXUM01037643    KQ561136    KXJ79606.1    EAA08040.3    CH477359    EAT42708.1    DS232052    EDS33245.1    EAT42707.1    GAPW01002564    JAC11034.1    KQ976434    KYM87194.1    KQ981799    KYN35701.1    AXCN02000004    GL437663    EFN70195.1    KK107522    EZA49342.1    AXCM01007540    ADMH02000502    ETN66182.1    NEVH01017447    PNF24414.1    ABLF02025720    GGMS01014782    MBY83985.1    CVRI01000047    CRK97300.1    AJWK01010115    GBBI01002319    JAC16393.1    GFXV01006287    MBW18092.1    GFDF01002388    JAV11696.1    AJVK01062615    KK854375    PTY15215.1    GL888262    EGI63651.1    GBXI01010627    JAD03665.1    GDHF01024836    JAI27478.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000283053    UP000053240    + More
UP000007266    UP000215335    UP000053105    UP000002358    UP000242457    UP000005203    UP000005205    UP000053825    UP000075809    UP000078492    UP000076502    UP000279307    UP000008237    UP000009046    UP000007062    UP000076407    UP000075840    UP000075885    UP000069940    UP000249989    UP000075903    UP000075882    UP000008820    UP000002320    UP000075902    UP000076408    UP000078540    UP000069272    UP000078541    UP000075886    UP000075881    UP000000311    UP000075880    UP000053097    UP000075883    UP000075900    UP000000673    UP000075920    UP000075884    UP000235965    UP000007819    UP000183832    UP000092461    UP000092462    UP000007755   

PRIDE

H9JU04    Q1HQ95    H9JU05    H9JU03   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF46938   SSF46938        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JU04   A0A2A4JLK9   A0A0S2Z324   A0A1E1W993   A0A2H4RMW4   A0A2H1V2T7   + More
A0A194Q6G5   A0A212FMF6   A0A2H1WHQ3   A0A3S2L872   A0A2H4RMR7   A0A3S2NT85   A0A2W1BQL9   A0A194R296   A0A3S2NHT6   A0A0S2Z3C6   I4DM93   A0A2A4JN64   I4DIS4   A0A2H4RMR9   A0A194R1G6   A0A2H4RMU2   A0A194Q0B2   Q1HQ95   A0A0S2Z350   A0A2H1V2R3   I4DIV6   S4PY20   I4DMP5   A0A2W1B842   A0A212FMH3   A0A2A4JN79   A0A212FBP0   J3JUN4   D2A5R3   A0A2H4RMQ6   A0A232ELM6   H9JU05   A0A0N0BHJ4   K7ITZ4   A0A194Q1X2   H9JU03   A0A2A3EKL1   A0A087ZQ01   A0A2H4RMV6   A0A158NWN2   A0A0L7QV98   A0A151WY48   A0A195ECA1   A0A154PFM2   A0A1Y1L6E1   A0A310SGC2   A0A3L8E2J1   E2BJ28   A0A336MFQ7   E0VHP2   A0A1B6L485   F5HKV7   A0A1D6TJS6   A0A182HSP7   A0A182P062   A0A1B6CGR6   A0A182G0T6   A0A182UXR4   A0A182LER6   A0A182XAU9   Q7QCC6   A0A182HSP6   Q178U4   B0WR71   A0A182TL25   A0A182YQJ3   Q178U5   A0A023EQY2   A0A151I5F0   A0A182FNW7   A0A151JU22   A0A182Q192   A0A182JUT9   E2A8W6   A0A182JE45   A0A026W000   A0A182M982   A0A182RS71   W5JP64   A0A182VWX1   A0A182NRL3   A0A2J7Q755   J9JJD5   A0A2S2R1Y2   A0A1J1ICM2   A0A1B0CFJ4   A0A023F5G9   A0A2H8TX43   A0A1L8DZ37   A0A1B0DII6   A0A2R7WAD2   F4WQ28   A0A0A1WYR9   A0A0K8ULV3  

PDB

1R5L     E-value=1.71731e-24,     Score=278

KEGG

101743183    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0016787   GO:0016021   GO:0005215   GO:0005622   GO:0006810   GO:0050113   GO:0016740   GO:0006108   GO:0030060   GO:0016615   GO:0000049   GO:0016876  

Length:

310

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02163

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01851

outside

1  -  310

 

 

Pi

235.457938

Theta

162.951797

Tajima's D

0.391305

CLR

0

CSRT

0.486925653717314

Interpretation

Uncertain