SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09559
Pre Gene Modal
BGIBMGA013018
Annotation
PREDICTED:_zinc_finger_HIT_domain-containing_protein_2_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.088
 

Sequence

CDS
ATGGACGAAACAGATACAACGAAGATCACAGAAAATACTTTTGCTAAAATTTGTGGACTATGTGAAGAACAGAAAAGCAAGTATTGTTGCCCAAAATGTGGTATATTATATTGTTCGCTCGGTTGTTATAAATCAGACAAACATTTAGAGTGTTCAGAAAATTTCTATCGTGACTGGGTTAATGAAGAACTCTCCTCGCAAAATGTGGATGAGGAATCTAAACGTAAAATGATTGAAATACTAAAAAAAATGCAAAATGAATCTAATGATAATGTTGATGACTTAGAAAATGATGATCATATAGACTCTGATGATTACGATGAAGAAGATTTACATGACAGGATAAAGAATTTAGACATCAATGATGCAGATGCCATTTGGAGTGCCCTAACTGAAGATGAAAAGAATGAATTTGAAGCTTTGATTAGTCAAGGAGATGTTGGTTCTATATTACCTCAATGGGAACCCTGGTGGACAAAAAGAACAAAAAGCAAGTTAGTAACAGAAGTATGTGATGATGAACTTGATAAGAACGTCGACACTTGTCCACAACTGAAAAATGTTCAAAAACTCACCTCTTTAACGAAAATTGCACCATCGACTACCGTGAAATTCAACATAATCAACATTCTAAGTTCATATGCTTTTATAATGAGATATTTCAATGGAGAGATTGATCCAGTGGAAGCTATTGTCCATTTACTAAGTATATGTGGGAATTTAGAATCAAATGCTAATTATGATGATCCTGCCATAGCTTTGGAAGCTGTCGCACAGAAATGTTTACAGAATGAACTTGTACAAACAGACAAACGTAGTACTGAAGTAATGAAACACGACACATATCTCATACTTCAGGGGCCGAATGATGACAAAAAGTCATTTTACTGTAAAGCTGCACTGTCCCATCTGTTCGAAATATTTACTGATGCAAAGTCTGCATTGAAGCACACAAAAATTGCTGAAACAAAGAAAAAGACAGAATTTTCTAAGAAGTTTCCAGAACAAAAAATTTACCATTTACCAAAATTAGATGTGGGTAAAGTGAAGATGTCTATGAAGAAGATAGAATATTATCTATCTTTCTTGGAGAGTTATAGCATGGAACTTTAA
Protein
MDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHLECSENFYRDWVNEELSSQNVDEESKRKMIEILKKMQNESNDNVDDLENDDHIDSDDYDEEDLHDRIKNLDINDADAIWSALTEDEKNEFEALISQGDVGSILPQWEPWWTKRTKSKLVTEVCDDELDKNVDTCPQLKNVQKLTSLTKIAPSTTVKFNIINILSSYAFIMRYFNGEIDPVEAIVHLLSICGNLESNANYDDPAIALEAVAQKCLQNELVQTDKRSTEVMKHDTYLILQGPNDDKKSFYCKAALSHLFEIFTDAKSALKHTKIAETKKKTEFSKKFPEQKIYHLPKLDVGKVKMSMKKIEYYLSFLESYSMEL

Summary

Similarity
Belongs to the PI3/PI4-kinase family.
EMBL
BABH01003857    ODYU01006728    SOQ48834.1    ODYU01001496    SOQ37784.1    AGBW02007651    + More
OWR54926.1    JTDY01000008    KOB79477.1    RSAL01000093    RVE47943.1    NWSH01001060    PCG72855.1    GAIX01003924    JAA88636.1    KQ459582    KPI99000.1    GEDC01016553    GEDC01012676    JAS20745.1    JAS24622.1    GECU01014495    JAS93211.1    GECZ01019555    JAS50214.1    GBRD01010604    JAG55220.1    GBHO01002491    GDHC01012747    JAG41113.1    JAQ05882.1    GDRN01067945    JAI64285.1    GBYB01000015    JAG69782.1    NEVH01009070    PNF33935.1    KK853042    KDR12142.1    GDKW01002428    JAI54167.1    GFDL01013296    JAV21749.1    QCYY01001806    ROT75164.1    KK854611    PTY17345.1    DS231826    EDS28703.1    GBGD01001973    JAC86916.1    GFDF01010623    JAV03461.1    JXUM01127272    KQ567170    KXJ69577.1    GFXV01006313    MBW18118.1    ABLF02016743    GFDF01009848    JAV04236.1    NNAY01000245    OXU29747.1    AJWK01015750    GFTR01005381    JAW11045.1    AJVK01004262    AAZX01001202    APCN01000827    AAAB01008987    EAA01689.5    CH477784    EAT36236.1    GL765974    EFZ15788.1    KK107109    EZA59049.1    GGMR01020323    MBY32942.1    QOIP01000008    RLU19936.1    GGMS01009436    MBY78639.1    AXCM01000480    AXCN02001509    BT128358    AEE63316.1    GGFJ01006631    MBW55772.1    CVRI01000010    CRK88845.1    APGK01036672    KB740941    KB632225    ENN77619.1    ERL90245.1    ENN77618.1    ERL90244.1    GEZM01052510    JAV74470.1    ADTU01021200    GGFK01011993    MBW45314.1    CH954181    EDV48334.1    KQ434829    KZC07782.1    ADMH02002066    ETN59705.1    CM000160    EDW96185.2    CH480842    EDW49611.1    ATLV01019123    KE525262    KFB43759.1    CH902617    EDV42444.1    GFDF01011394    JAV02690.1    CM000070    EAL27767.4    CH933806    EDW16565.1    CH479179    EDW24687.1    OUUW01000013    SPP88176.1    CH940650    EDW67664.2    GECZ01011507    JAS58262.1    GBXI01009479    JAD04813.1    JRES01001623    KNC21415.1    CCAG010016865    JH431610    CH916374    EDV91115.1    GAMC01003304    JAC03252.1    KZ288318    PBC28281.1    NEDP02005462    OWF40449.1    KQ982351    KYQ57288.1    JXJN01017603    GAKP01023421    JAC35537.1   
Pfam
PF04438   zf-HIT        + More
PF00795   CN_hydrolase
PF00613   PI3Ka
PF00454   PI3_PI4_kinase
Interpro
IPR039646   ZNHIT2        + More
IPR007529   Znf_HIT       
IPR003010   C-N_Hydrolase       
IPR036526   C-N_Hydrolase_sf       
IPR042236   PI3K_accessory_sf       
IPR018936   PI3/4_kinase_CS       
IPR000403   PI3/4_kinase_cat_dom       
IPR011009   Kinase-like_dom_sf       
IPR036940   PI3/4_kinase_cat_sf       
IPR016024   ARM-type_fold       
IPR001263   PI3K_accessory_dom       
IPR015433   PI_Kinase       
SUPFAM
SSF56317   SSF56317        + More
SSF48371   SSF48371       
SSF56112   SSF56112       
Gene 3D
PDB
1X4S     E-value=2.95856e-06,     Score=122

Ontologies

Topology

Length:
370
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.24214
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06467
outside
1  -  370
 
 

Population Genetic Test Statistics

Pi
148.872468
Theta
169.774682
Tajima's D
-0.297742
CLR
0.794117
CSRT
0.288685565721714
Interpretation
Uncertain
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