Silkworm Genome Informatics Database

Gene

KWMTBOMO09551

Pre Gene Modal

BGIBMGA012826

Annotation

PREDICTED:_uncharacterized_protein_LOC106129912_[Amyelois_transitella]

Location

Bomo_Chr16(+):3890301-3930425 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 3.514

CDS

ATGGAACAGTCGACGCTCATGTCTCCGGGACAAGCTCTGATGGGGATGGACGCGAAGGATCGACTCGTGGAGGAGATATTACTCCTAGCGCTGTTCCTTGTGTCGACGGCGGCAAACTCGCTCGCCCTACTCGTTTTCTGCAGGCGACCCGGTCTCAGAACTATATCGAATCGGTTCGTCATCAATCTTCTGGCGACGAATCTATTGACTACTTCATTGTTGGCGCCCGCGCTCTTCGGCGAGCATACGACGAAGAAAAACGCCAGTCTGTGGGTGGAGGCAGGCGACTCGGCGGCCTCAGCCTGCAGCCTGTCAGCCCTGTTGTCCGTAATGCTGATTTCACTCGACCAGCACCACGCCGTCACGGATCCTCTTCGCTGCCACACCCGTCTCTTACAGCGTCGTCCAAGCTCGCTCTGCGCCGCCACCTGGGTCGCCGCGGCATCCGCAGCCGCAATTCGAGCTACCATCGCCGTGTTCCACTACTACTATCCGACCGAATCAGCGCTGCAAGGTATCCAGCTCGCCTATTACGTCGTGTACTTGATATTGGGAGTGATCGCACCGATAACTATAGTTTGCGTCATGTACGCGAGAATCTACCGTGCGGCGCGCTCGTCTGGATTACGAGCTCGTGCGAACGGTGCCAGTGCTCTGCAGTTACACGAGCCCCCGCCCCCCCTTCCGAACCTCATCGAAGAGGGGGAAGGAGAGGGACTCACACTTAGAATAGACGGATCAGAAGACGTAGCGTCCGGAGAGCACGATCGCAACAAATTTGGACCGTTTCTGTTACCACCGTCAGAGAGGCCAGTCCGTTGCCCATCTGTTGCCAGTCTACGGAATTCCCGCACTAAAGATGGAAAGTCGAACGAAGATCTGAGGAAGGGATTACCGTCTGTTAGTTCGGCACCATCACTCGCTGCCCCTCTCTTGGCGGTGCAGCAACGGACCCCTCAGACCTCACACAATGGATCTAGAATAACATCGATACGATGCCGCATTTCAAACGCCTCCCTGTTCCGTTATAGAGAAGAATCTCGTGCGGCTCGCGTCGGTTTGCTGACGGGGGCGTTGGCCATGCTGCACGTCCCGCATGCCGCAGCCGCCGTGGCCTCCGCCGCTGTCCCCGGGCTGGCTGATTGTGCGCGCACCGCATCGCTCGCGTTACTCCTGCTTGCCTCTGCGGCTTCACCGTTCCTGTTTGCACTACGTTCGCGCCGGGTGCAGCGTGAGGCTCGGCGTCTGTTCGTGCCTGAGAAGAGCGCTTGGGAGAGAGCATCGGCGTCCGCGTCGTCTGCGGCGGCGGACGGGCAACGCGCTAAGGCCGCTTTGGAGTTGCTGCGGACATTGTCGCCGAGCAGCGGAGAGCCAGCGCCGGACAGCTCGGCGGAGTCGGGTCCTTGCCGCGGCTCGTTCAGCTCTGGGGGCAGCACGCAGCTCTCGTCAGCTTCGGACGAGTGA

Protein

MEQSTLMSPGQALMGMDAKDRLVEEILLLALFLVSTAANSLALLVFCRRPGLRTISNRFVINLLATNLLTTSLLAPALFGEHTTKKNASLWVEAGDSAASACSLSALLSVMLISLDQHHAVTDPLRCHTRLLQRRPSSLCAATWVAAASAAAIRATIAVFHYYYPTESALQGIQLAYYVVYLILGVIAPITIVCVMYARIYRAARSSGLRARANGASALQLHEPPPPLPNLIEEGEGEGLTLRIDGSEDVASGEHDRNKFGPFLLPPSERPVRCPSVASLRNSRTKDGKSNEDLRKGLPSVSSAPSLAAPLLAVQQRTPQTSHNGSRITSIRCRISNASLFRYREESRAARVGLLTGALAMLHVPHAAAAVASAAVPGLADCARTASLALLLLASAASPFLFALRSRRVQREARRLFVPEKSAWERASASASSAAADGQRAKAALELLRTLSPSSGEPAPDSSAESGPCRGSFSSGGSTQLSSASDE

Uniprot

H9JTG4 A0A437BBY1 A0A1Z2RRK7 A0A0L7LS67 A0A212FMR6 A0A194Q0A1 + More
A0A194R286

Pubmed

19121390 28605547 26227816 22118469 26354079

EMBL

BABH01003890 RSAL01000093 RVE47926.1 KY963164 ASA46484.1 JTDY01000253 + More
KOB78046.1 AGBW02007651 OWR55028.1 KQ459582 KPI98986.1 KQ460878 KPJ11629.1

Proteomes

UP000005204 UP000283053 UP000037510 UP000007151 UP000053268 UP000053240 + More

PRIDE

H9JTG4

Pfam

PF00001 7tm_1

Interpro

IPR000276 GPCR_Rhodpsn + More
IPR017452 GPCR_Rhodpsn_7TM

ProteinModelPortal

H9JTG4 A0A437BBY1 A0A1Z2RRK7 A0A0L7LS67 A0A212FMR6 A0A194Q0A1 + More
A0A194R286

KEGG

101743690 no KO assigned | (RefSeq) probable G-protein coupled receptor No9

GO

GO:0004930 GO:0016021 GO:0007186 GO:0050113 GO:0016740 GO:0006108 GO:0030060 GO:0016615 GO:0000049 GO:0016876

Length:

487

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

151.49017

Exp number, first 60 AAs:

24.03938

Total prob of N-in:

0.00883

POSSIBLE N-term signal

sequence

outside

1 - 24

TMhelix

25 - 47

inside

48 - 58

TMhelix

59 - 81

outside

82 - 95

TMhelix

96 - 115

inside

116 - 135

TMhelix

136 - 158

outside

159 - 172

TMhelix

173 - 195

inside

196 - 349

TMhelix

350 - 372

outside

373 - 381

TMhelix

382 - 404

inside

405 - 487

Pi

212.150129

Theta

164.643189

Tajima's D

1.124369

CLR

0.215674

CSRT

0.699315034248288

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics