SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09549
Pre Gene Modal
BGIBMGA012823
Annotation
PREDICTED:_uncharacterized_protein_LOC101743839_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.381
 

Sequence

CDS
ATGTCACTGAAAGCTTACGAAGACGCCTGCTTAAGAGCGGAGCTGTTCGGTCAGCCTTTACCGGACAAAGATGAATTTATCAGGAAAAATAAACATTTAGATATTGTTGAATTCGAAGAAGTGGAAATAAAAACTGCTGAGAATACGGCTATGCTTCATGATCAAATGAAGGAAGGCACGACTGGTCTCACGGAACTCAACACTATCCTAGATTCAACTCAAACGAAAATAAATCGACTAAAAGGCGTTTGCGGTAGCATCACGAATTTCTTCCGAGTCAAATTGAATTCCAAAGATAATATTTCGTATTCTAGCGACCCCAGTTACGTAGGTCAAACGAATTTCCAAAGAGACTACGTGCCGGTTTCGAACCGAATCGACTCTGTGAACGCAGGGCTTGGCCCCGACGATACAGAAATGTCAGGAAGCGCGCGAAATGAAAAACATGGCGGTCAACAAAATGGCGGCGACATCAATACGGCTCTGAAACATTTAGATGAGATGCAGCAAGCCGATAAGAATGTCAGCAAAGCGATGATTTGTGATATTAGTAAACAAGTTGATACACAAATGAGTAAATTAGATCAGATGATTTGCCAAGCGGATCGCGCTCAGAATTCCTTGCAGCGACAAAATAAGCAGTTGAGGTCTTTCTTGCGATAG
Protein
MSLKAYEDACLRAELFGQPLPDKDEFIRKNKHLDIVEFEEVEIKTAENTAMLHDQMKEGTTGLTELNTILDSTQTKINRLKGVCGSITNFFRVKLNSKDNISYSSDPSYVGQTNFQRDYVPVSNRIDSVNAGLGPDDTEMSGSARNEKHGGQQNGGDINTALKHLDEMQQADKNVSKAMICDISKQVDTQMSKLDQMICQADRAQNSLQRQNKQLRSFLR

Summary

Similarity
Belongs to the BolA/IbaG family.
EMBL
BABH01003905    ODYU01009013    SOQ53100.1    KZ150097    PZC73591.1    RSAL01000093    + More
RVE47925.1    AGBW02007651    OWR55030.1    JTDY01002361    KOB71584.1    KQ460878    KPJ11627.1    KQ459582    KPI98984.1    NWSH01000169    PCG78823.1    GFDF01010621    JAV03463.1    AJWK01025068    GAMC01013797    JAB92758.1    KZ288254    PBC30885.1    GEZM01040920    JAV80708.1    AXCM01000144    APCN01000245    LBMM01004860    KMQ92031.1    AAAB01008859    EAA07730.4    KQ414609    KOC69309.1    GFDL01000189    JAV34856.1    NEVH01025161    PNF15572.1    AXCN02001476    NNAY01001028    OXU25428.1    JXUM01024208    KQ560683    KXJ81286.1    KQ767320    OAD53413.1    GL441701    EFN64398.1    KQ981335    KYN42655.1    ATLV01015691    KE525027    KFB40586.1    ADMH02001265    ETN63320.1    CH477193    EAT48560.1    KK107078    QOIP01000011    EZA60368.1    RLU17226.1    CVRI01000002    CRK86614.1    GL445560    EFN89411.1    KA648410    AFP63039.1    ADTU01013175    KQ980636    KYN14932.1    KQ976401    KYM92578.1    GAKP01016693    GAKP01016691    JAC42259.1    KK853387    KDR07945.1    GL888182    EGI65716.1    GL762647    EFZ20989.1    PYGN01000604    PSN43480.1    KQ978023    KYM97924.1    GBXI01015811    JAC98480.1    GAPW01005344    JAC08254.1    CCAG010011618    UFQT01000659    SSX26224.1    UFQT01000150    SSX20906.1    CH963851    EDW75393.1    CH480823    EDW56083.1    GEFM01003077    JAP72719.1    GANP01000282    JAB84186.1    GEDC01013218    JAS24080.1    LJIG01022884    KRT78231.1    ABJB010128864    ABJB010574389    ABJB011056505    DS628877    EEC01149.1    GEDC01031180    JAS06118.1    JH818799    EKC28544.1    CAAE01014993    CAG07838.1   
Pfam
PF03155   Alg6_Alg8        + More
PF01722   BolA
PF02949   7tm_6
PF03051   Peptidase_C1_2
Interpro
IPR000727   T_SNARE_dom        + More
IPR039488   ALG6       
IPR002634   BolA       
IPR004856   Glyco_trans_ALG6/ALG8       
IPR036065   BolA-like_sf       
IPR004117   7tm6_olfct_rcpt       
IPR000169   Pept_cys_AS       
IPR004134   Peptidase_C1B       
IPR038765   Papain-like_cys_pep_sf       
SUPFAM
SSF82657   SSF82657        + More
SSF54001   SSF54001       

Ontologies

Topology

Length:
220
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00017
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12807
outside
1  -  220
 
 

Population Genetic Test Statistics

Pi
278.273425
Theta
205.996212
Tajima's D
0.921881
CLR
0
CSRT
0.638618069096545
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号