SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09540
Pre Gene Modal
BGIBMGA012817
Annotation
PREDICTED:_myb/SANT-like_DNA-binding_domain-containing_protein_3_[Plutella_xylostella]
Location in the cell
Nuclear   Reliability : 2.849
 

Sequence

CDS
ATGGCTGCTAAAAGAAGTGCGTGGGCACGCTTAGCAGAAGAATTTAATGCTATAGAATCAAATGCTAGGAGATCTGAAGTTCAATTAAAGAAATGCTGGGACAATATGAAAACCAGGAGGAAACAGAGATTGATCCAAGAAAAAAGGGACCGGTTGAAAATGGGAGAACTGTCGAACTCATTCACAATACAGTCTCGAGATGATGAGGCACATAATGATATGACCGATTTAAAGATCCTAATAAAAGGGGATAATGACAGAATTATGCCTTCCACACCTAAAGTGACTAACATTCGGAGTCTAGCTGTTGATGAGGACTTGAAAATCAGAAAAGAACATAACATATCCCAAAGACATCATGAGGAACTCATTAAGTTAAGGATAGCGGAGCAAGAGTGGGTCACTAAAGCTGCTGAAGAAAGATATCACAAGGCACGTCTAGAGAAAGAGCTAGCAGAACTCAGACTTGACAAAGAAAAACGTATAAATATATAA
Protein
MAAKRSAWARLAEEFNAIESNARRSEVQLKKCWDNMKTRRKQRLIQEKRDRLKMGELSNSFTIQSRDDEAHNDMTDLKILIKGDNDRIMPSTPKVTNIRSLAVDEDLKIRKEHNISQRHHEELIKLRIAEQEWVTKAAEERYHKARLEKELAELRLDKEKRINI

Summary

Pfam
PF13873   Myb_DNA-bind_5
Interpro
IPR028002   Myb_DNA-bind_5        + More
IPR001005   SANT/Myb       
IPR026709   Msantd3       
PDB
6HQA     E-value=0.00568602,     Score=88

Ontologies

GO

Topology

Length:
164
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.54581
inside
1  -  164
 
 

Population Genetic Test Statistics

Pi
200.798847
Theta
172.680129
Tajima's D
0.566668
CLR
4.495204
CSRT
0.528323583820809
Interpretation
Uncertain
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