Silkworm Genome Informatics Database

Gene

KWMTBOMO09536

Pre Gene Modal

BGIBMGA013030

Annotation

PREDICTED:_protein_phosphatase_1D_[Bombyx_mori]

Location

Bomo_Chr16(-):3472855-3477899 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.986

CDS

ATGCCAGCGTCAATCGGCGTTAATTTACGCGTGACGGGGCATTGTAGCCAAGGCGGGAGAAAGTACATGGAAGATTTGTTTTCCGTTGCTTATCAACAAACTGAGGATGAGCGGGATTTAGAGTACGCTTTTTTCGGCATTTACGACGGACATGGAGGCAGCGAAGCAGCAGCGTTCGCCAAAGAACACCTAATGGATTCAATTGTAAAACAGCGACAATTCTGGTCGGACAACGACGAGGATGTTCTAAAAGCCATCAGAAATGGTTATATGCTGACCCACTTGAACATGTGGAAAGAGCTAGAAAAATGGCCTAAGACAGTGACAGGCTTGCCAAGCACAGCAGGCACGACAGCCAGTGTGGCTTTTATTAGACGAGGAAAAATATATGTTGGACATGTCGGCGATTCGGCAATCATACTTGGTTACCAAAAAGAAGGTTCAGAAGAATGGGCTGCAAAACCTCTAACATTAGATCATAAACCAGAATCAACAACAGAGATCGAAAGGATACAAAGGTGTGGTGGTAAAGTGGTCTCCAAAGCTGGTGTTCCTCGGGTTGTATGGAACAGACCACGACCTGGACACAAGGGACCAATAAAAAAGAATACACCAATGGACGAGATACCTTTTCTTGCTGTTGCGAGATCACTAGGGGACTTGTGGAGTTATAATCCTCAGAATGATGAGTTCATAGTCAGTCCAGATCCTGATGTTGGGGTTCTTACTATTGATCCTACAAAATTTCGGTGTCTTATTTTTGGTACCGACGGCTTATGGAATATGATATCACCTGAAGGTGCTGTAAATTTAGTTCAAGCCACAGAAAAGCATAATGAGGCTGCATTAGTTGGTGGGAATAGCAATCAACCTAGGGATTGGCTTAATCCATCAAAAAGCCTTGTTGATCATGCATTAGAGAGGTGGTCTAATACCAGAATGAGAGCTGATAATACATCAGTAGTGACACTAATGTTGGACCCGCCGGGACCACCGCGTGCCACCGTGCTGCGGTCTCGCAGTGCCGCGCCCCGAGCCCCGGCCGACCCCGCGCCCCGCACCGACCCCGCGCCCCTCCCCGACCGACCCGTGCCGCAGAACGGACTCACCATCATGACGCGCTACTCCGACGCCGACCGCACCGCCGCGCCCCTGCCCCCGCTCCCCCCCTGCGCCACGCTCGACACCCGCCTCTCCGTGGCGCCCACAGACGACGCCGCCAGCGCCACCAGCCCCGCCGGCACAACTTCCGCCACTGAAGACACCGATACAATCACTACGTATGGGAATCCAGCTGAGTCGTACTTTATGGCGCGCCTCCTCAATCGCACCAAAATAGTCAATTCGCTCGCTTCCGTCCCCGAAGAACTCGCACACGTCGACATCCCCCCGTCGGAGACGCGCGAGACGACGCCGCCGGCGACGCGCCTGTCCGTGCCATCGCCGCCGCCGGTGTCCGACGTCGCATCTGTTGCTCCCGTCGAACCGAGAGAGCCCTCCCCCCAGCCCTGCGACCCAGACGAGGTTGAAGACAGTGCTCCGCCCGACGATGGCTGCATTCAAATCAATGAAGTGTCGTCGAGTTCTCCTACGGAAGCCCCGCCCAGGCAACGCGGTCGCCGTTCCCGCGCCGACCTTCGTCCCGACGAACCGCCCGTCGCCAACGACCGCGTGCTGCGGTCACATAACGACGCGGAACCGCCGCCCCGGCCGAATACCCGGCAAACCGCTACAAGAAGTAAAGGAAACACAGTTTCCCTAGACCGTGTCGTCATTCTGACGCGTCGTGCGCAATCGCAAACGACGCCAGTCCCGAACAAAACTGAACCGCGTACACCTGCCAGGAAGGCTCAGAGCGGGTCCGATGAAACTGTACCGGTAGACGAAGAGGCCGCGAAGGGAGCCAGAATGACTAGATCACAGGGTGGCACTGCAACTCCACTAGCTCAAAAGATAACCCGCAGCATAGGTGCGTATGCGCGGGAACTGCGGGGAGCGGCTGTGGCGGCGGCGGCGGCGGCGGGCGCGCGGGCGGGAAACTCGGCGCGCGCCCCGGGGCCGGCGCGGCGGACCCCGGCGGCGCGGCGGCAGGGCGCGCGCTCCAAGGAGAACCTCGGCGCAGGGAGGGACCGCGCCCCCGCCCCCGCCGCGCCACCCGCCTCCCGCCCGCCGCGCCGCCGCGCTTCCGCTGATGAGGTGCACTCCACTACCTCGGAGCCGGCATCTTCCCGTCTGGAGGCCCGGGCGCTTCGGTCACGCAACGAGCCTGCGCCACCTCCAAACAAGCGCGCCCGGCGCGAGACTGCGTCGTACAAGGCGGCCGTGGAGCGGGTGGCGCGGGGGCTCGGCAAGCGCGCGTCCGGTCCGTGGGCGCCGGCGCTGTCGCTCCGCAACCGTCTCCGGCGCCGGCTCGTCAAGTAG

Protein

MPASIGVNLRVTGHCSQGGRKYMEDLFSVAYQQTEDERDLEYAFFGIYDGHGGSEAAAFAKEHLMDSIVKQRQFWSDNDEDVLKAIRNGYMLTHLNMWKELEKWPKTVTGLPSTAGTTASVAFIRRGKIYVGHVGDSAIILGYQKEGSEEWAAKPLTLDHKPESTTEIERIQRCGGKVVSKAGVPRVVWNRPRPGHKGPIKKNTPMDEIPFLAVARSLGDLWSYNPQNDEFIVSPDPDVGVLTIDPTKFRCLIFGTDGLWNMISPEGAVNLVQATEKHNEAALVGGNSNQPRDWLNPSKSLVDHALERWSNTRMRADNTSVVTLMLDPPGPPRATVLRSRSAAPRAPADPAPRTDPAPLPDRPVPQNGLTIMTRYSDADRTAAPLPPLPPCATLDTRLSVAPTDDAASATSPAGTTSATEDTDTITTYGNPAESYFMARLLNRTKIVNSLASVPEELAHVDIPPSETRETTPPATRLSVPSPPPVSDVASVAPVEPREPSPQPCDPDEVEDSAPPDDGCIQINEVSSSSPTEAPPRQRGRRSRADLRPDEPPVANDRVLRSHNDAEPPPRPNTRQTATRSKGNTVSLDRVVILTRRAQSQTTPVPNKTEPRTPARKAQSGSDETVPVDEEAAKGARMTRSQGGTATPLAQKITRSIGAYARELRGAAVAAAAAAGARAGNSARAPGPARRTPAARRQGARSKENLGAGRDRAPAPAAPPASRPPRRRASADEVHSTTSEPASSRLEARALRSRNEPAPPPNKRARRETASYKAAVERVARGLGKRASGPWAPALSLRNRLRRRLVK

Cofactor

Mg(2+)

Similarity

Belongs to the PP2C family.

Uniprot

H9JU18 A0A212FMS6 A0A3S2M1X0 A0A0L7KVW2

Pubmed

19121390 22118469 26227816

EMBL

BABH01003940 BABH01003941 AGBW02007651 OWR55038.1 RSAL01000071 RVE49112.1 + More
JTDY01005199 KOB67265.1

Proteomes

UP000005204 UP000007151 UP000283053 UP000037510

PRIDE

H9JU18

Pfam

PF00481 PP2C

Interpro

IPR000222   PP2C_BS        + More
IPR001932   PPM-type_phosphatase_dom
IPR036457   PPM-type_dom_sf
IPR015655   PP2C

SUPFAM

SSF81606 SSF81606

Gene 3D

3.60.40.10

CDD

cd00143 PP2Cc

ProteinModelPortal

H9JU18 A0A212FMS6 A0A3S2M1X0 A0A0L7KVW2

PDB

3KDJ E-value=1.37677e-19, Score=240

KEGG

101742111 K10147 protein phosphatase 1D [EC:3.1.3.16] | (RefSeq) protein phosphatase 1D

GO

GO:0004722 GO:0046872 GO:0004721 GO:0003824 GO:0043169 GO:0019310 GO:0050113 GO:0016740 GO:0006108 GO:0030060 GO:0016615 GO:0000049 GO:0016876

PANTHER

PTHR13832

Length:

806

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00854

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.00024

outside

1 - 806

Pi

148.582074

Theta

141.186071

Tajima's D

0.030956

CLR

1.03801

CSRT

0.380980950952452

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics