Gene
KWMTBOMO09530
Pre Gene Modal
BGIBMGA012814
Annotation
PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
Full name
Protein suppressor of white apricot
Location in the cell
Nuclear Reliability : 4.387
Sequence
CDS
ATGGCATCAAAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATGAAATCAATGAGAAAAAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGGACGATGACAAAGCTTTGTTCATTGATCAAGGGAAACACCTCATTCCGTGGATGGGGGATGAAACGTTGAAAATCGACAGGTATGATGCAAGAGGAGCCCTACACGATGTGTCAGCATTGGAAGCCCCGCCGGGAGGATACGACTGGCGGGTGGAGTTAACAAAATCTGAGCTTGATGTGGAGCAACTATGCGATGATGAACGTTACCGAGCTCTATACACAAATGAAGATGAAGAAGAAATGTACAAAGAGGAAGAACTGAAGCGTCTCCATGCGGCTGGTTACGGACAAGTTGGTTTCAATTATGATACATTAGCTCCACCTAAGCCACCCGCGAAGCCAGTTGAGGTAGATGAACCATTTGTTCCGTCTTCAACTCTTGAAACTCTGCTACCTGAAGATGTTGTTTTACCTGAGACACAAAAACTGAATGCCATCATAGAGAAGACAGCCAACTTTATAGCAAGTCAGGGTGTCCAGATGGAGATCCTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCCTCAACAAAGACTCCCCTTTGCACCCATATTATAGTGCGCTCATCGCACTCATCAAAGCCGGTAAATGGCCTGAGAAGAAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGATGAATATCTCCATCCAAGCTTAGCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGCATCCAATACAAGCCATCAGCGGACTGCGACTACACGATGCTGGTGTCCAGCCTGGTGGGGCCGCCGCCCGAGGAGCCTTGTCCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGCATCCCCACATTTCCAAGGAACCCGTCATGTATAACACGCAAGGAACATCGGATCCAAGGCTACAAGCAGCACAGACAACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTACATGGCGCAGGCTGAAGCACAAGCACGTGCGGAACAAAAAAAAGAAATCACCGTAACCAAATCTACTGGACTTAGTCTCATGAAGAACTATAACTCTGATTCCGGGTCCGACGATACTGATTCCGAAGATTCTTCGTCATCGGACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGACGTTCAGACGGTGATCGACAAGATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACATAGTGCGTTCGAAAAACGATCCCAGGTTCACGTTTCTGGAGCCCGATCACGAATATCATCCGTATTATAAAAGATTACTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGGACAAGAAGAATTCTTTGCCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGCCCGATCCTATTTTGCCGAAACCGGCTCTGCCTTACGAGTCGAGTACGGACGACGAGAACGAGGAGAAGCAAACGGAAAATCAGGAACACATTGAGCCAAAGGACCACACCAAATTAGTCGCTCAGACCCCAAGTGTGCTTCCGCCCATAGTAGTGTACAAGATGGACGGGTTGATCCACGATTTCCCCGTCGTCAGAACGATCGAGCCGGTCAAGCCGACATCCCAAACAAGCCCACCGAAGCTCACGCCAGTTATACACGAAGTAAAAGAAATACCTAAAATAGATCCTCCCGGTCTCGTAGAGAAGCCACAACTCGTCGGACCGGTAACTAATACTTATGTCAAGGAAAACACGCATAAAACAAGAGAAGATAACTCGGAACGTAGAAAAGAGAGAAAGAAAGATCGCAAGAAAGAATACAAATCGAAATCTAGGAGTAGAAGTAAGAGAAGAAGTCCGGTGAGGAATTCCGTGAAAGAAAAAAAACGGGAAAAAGATGAGAAAGTTAGTAGTAGTAAGAAGAGTGAACCAGTCAAGGAAAACTTTCCGACCGAAATTATTTCGCTAGAAGACAACGGAGATGATTTGATTGATCTCACCGGCGATCAGTCCGACAGTAAACGTAAGTTTCTAATGAAAATTAAACTTTAA
Protein
MASKWTRRRSEAGILRKNEINEKKEELLVFGYSCKIFRDDDKALFIDQGKHLIPWMGDETLKIDRYDARGALHDVSALEAPPGGYDWRVELTKSELDVEQLCDDERYRALYTNEDEEEMYKEEELKRLHAAGYGQVGFNYDTLAPPKPPAKPVEVDEPFVPSSTLETLLPEDVVLPETQKLNAIIEKTANFIASQGVQMEILIKAKQGDNPQFQFLNKDSPLHPYYSALIALIKAGKWPEKKVDSVEERPPDNDEYLHPSLASTIIESAPSIPSIQYKPSADCDYTMLVSSLVGPPPEEPCPGEEPPPGTEVSAPHPHISKEPVMYNTQGTSDPRLQAAQTTYYQQYAAYYHQYMAQAEAQARAEQKKEITVTKSTGLSLMKNYNSDSGSDDTDSEDSSSSDSKDQIILTPPEDVQTVIDKMAAYVARNGDEFADIVRSKNDPRFTFLEPDHEYHPYYKRLLQQKKGVDVNGKKKDKKNSLPVSFSIKKLKEPDPILPKPALPYESSTDDENEEKQTENQEHIEPKDHTKLVAQTPSVLPPIVVYKMDGLIHDFPVVRTIEPVKPTSQTSPPKLTPVIHEVKEIPKIDPPGLVEKPQLVGPVTNTYVKENTHKTREDNSERRKERKKDRKKEYKSKSRSRSKRRSPVRNSVKEKKREKDEKVSSSKKSEPVKENFPTEIISLEDNGDDLIDLTGDQSDSKRKFLMKIKL
Summary
Description
Regulator of pre-mRNA splicing (and, possibly, of other RNA processing events). Regulate its own expression at the level of RNA processing.
Keywords
Alternative splicing
Complete proteome
mRNA processing
mRNA splicing
Nucleus
Phosphoprotein
Reference proteome
Repeat
RNA-binding
Transcription
Transcription regulation
Feature
chain Protein suppressor of white apricot
splice variant In isoform B.
splice variant In isoform B.
Uniprot
Pubmed
EMBL
Proteomes
Interpro
SUPFAM
SSF109905
SSF109905
Gene 3D
ProteinModelPortal
PDB
2E60
E-value=7.31285e-13,
Score=181
Ontologies
GO
PANTHER
Topology
Subcellular location
Nucleus speckle
Length:
709
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000500000000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00374
outside
1 - 709
Population Genetic Test Statistics
Pi
211.08431
Theta
172.074055
Tajima's D
0.58895
CLR
1.167986
CSRT
0.545722713864307
Interpretation
Uncertain
