Silkworm Genome Informatics Database

Gene

KWMTBOMO09528

Pre Gene Modal

BGIBMGA013037

Annotation

PREDICTED:_eukaryotic_translation_initiation_factor_4E_transporter-like_[Bombyx_mori]

Location

Bomo_Chr16(-):3270252-3292789 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.516

CDS

ATGGTGCGCGAGGCGGGCGGGGTGGGGGGAGCGGGAGGGCCGGGCGGCGCGGCCTGGGAGGAGCCCGAGTACCGACCGGAGCCCTACCGACCGCCGAGGGAACGACAGAATGCTGACAGGTACGAACGTCGTTCGTTCGGTCGCGACTCCTACCCCTCGGATCTGAAGCGAGAACGCGACGACCGCTTCAACAACGACAAGATCAGGGACAGAGACGAGCCCCGCAGGAATAACCGATACAACCAGCGCCGATACGACAAGGAAGAGGAACCCGAGTGGTTCAGTGGGGGACCGACGTCTCAACTGGAGACCATCGAGCTTCGCGGCTTCGACGATCCGCCCAAGAAGAACGGGACCGCCAGCGAAAAGGAGACCGATAAGCGCAGCAACAGCGGCGGCTCGCGGTCTCCGTCGGAGCGGTGGCGCGAGACGTCCTCGCCCCTGTCGCAGCCCACCATCGACTCTGTCAATACCAGCAATGACAAGGATTCAGGAGTGGAGTCGAAGACGGAAGACGTTCATCAGAACAACGACCAGCCGGAGTTCAACCTGGACGAGTTCCTCAAGTTTGACACGATTCCTGATGTACTCACGAACGGCGGAAGCGAAACCGAAGGCGGAAGTCGTTTTAGTCAATGGTTCAGACGGGAGAGTCCGACAAACGACAAGCATTACGAGAGACTGCTCCACAATATTGTCGATGAGCTGGAGAGTCCGCCGCCGCGCGAGGCCGTGTTCGCGCCCATCGCGCCCGCCGCCCCGCCCCGCGCGCCCCCCTCGCTGCTCGACCTGCTGCTGCGCGCCAACGACGCCCGCCCAGAGGCGACATCGATTGGCGGCAAGGTGCATAGTCTCGAAGAGTTGGAGGCTCGACTTCGGCCGCAGCCGGTACAGCATCACAACGTTCCCGACCACGATCTCACTGCATTTAAACGACTCCTGGCGCAGGTGTCGGGCGGACACGCGGTGGCAGCCGGCGACCCTCCGCGTCATCAACCCATGACCTTACTGCAGATGCTGAATAAAAGCATGGAGCAGCAACAGCAGCAACAACAACAACAGCAACAGCAACAACAACAGAAGGCTCAGCAACAACAACAACAACAACCGCATATACCTCAAGAGCTCCTATACAAGCTCTTACAAGTCCAACAGCTGACCAATACTGACGAGCATCCCGCCCATACCATGCGACCGCAGCAGCCGCCGGACCTGCCGGCCCACGGAGCCGTCATCACGCCCTCGGACCGCGAGCTGCTACAGAGGCCCGAAGCTCAGGCGATCGTGCACGGCTTAAAAGCTGGCGAGATCACGGTCCAGCACCTGATGCAGCAGCTCAGCAACCCGGGCCTGCAGAGCAGACACCGCGAGATACTTCTCACCATCCTACGTTTGCATCACCAAAAAAGACAGATGAGTTCCCCCCTCCCGTGCGGCGCGCACCTCGCCCCCCCGCCGCACCAGCCGCTGCGCCTGTCGCCCCTGCCGCACCAAGCGTTCTGTGTGTCCCCAATAATGGCGACCAGTCCGAACACGCTGACGGTACATCACACAGCGAGCGGCCCCGCGCGCATCCCGTCCCCGCGCGAGCTGGCCGCGCACACGCAGTCCATCATGCACAGCGCGCTCATCAAAAAGAAGCTGGAGGAGCAGCGCGAGAACTACCGCCGCCGACACGAGATGCAGCAGCTCCAGCAGCAACAGCAGCAGCAGCACGTCAAGCAGTCGACGCCGATTTCCTTCACGCCGACATCCGTGCTACGTAAGATGACAGCTGAGAAGGAATCCGACTCGCCGAGCCCTAAACAGTGGCAGTCCAACAAGATACCGCAGGGACGACCCATTGTCAAGGGGAACCAAAGCGGCCCCGTTCCTATGAACTACAATCCTGTGTCGAACGATTACCAACACTATATGAACCAACAGCAGCAAATGCCCGGCGGCGTCCGTCAGTTTCCCCTTCAGCAGCAAAGACAGCAAGGACCCAATACGTATAATAACATTAATAACATGAACCGAGGTATGTCCGGTGGAACCACTCTGCATCAGCTGCTCGTTCAGTCGCACCAGCGAAGCATGAATGAGCTGGGTGGGGGCGGCGCGGCGGGCGGCGACAACCAGCTGGCGCGGTGGTTCTCCCCGGAGTTGCTGGCACGTGCCTCGGCCGGGAAGCTGCCCTCCGTGCACGTGCCCAACGCGCTCTCGCTGGAGGAGCTGGAGCGACACCACGCGCCAACCCCTCCCGCGCGCAACTGA

Protein

MVREAGGVGGAGGPGGAAWEEPEYRPEPYRPPRERQNADRYERRSFGRDSYPSDLKRERDDRFNNDKIRDRDEPRRNNRYNQRRYDKEEEPEWFSGGPTSQLETIELRGFDDPPKKNGTASEKETDKRSNSGGSRSPSERWRETSSPLSQPTIDSVNTSNDKDSGVESKTEDVHQNNDQPEFNLDEFLKFDTIPDVLTNGGSETEGGSRFSQWFRRESPTNDKHYERLLHNIVDELESPPPREAVFAPIAPAAPPRAPPSLLDLLLRANDARPEATSIGGKVHSLEELEARLRPQPVQHHNVPDHDLTAFKRLLAQVSGGHAVAAGDPPRHQPMTLLQMLNKSMEQQQQQQQQQQQQQQQKAQQQQQQQPHIPQELLYKLLQVQQLTNTDEHPAHTMRPQQPPDLPAHGAVITPSDRELLQRPEAQAIVHGLKAGEITVQHLMQQLSNPGLQSRHREILLTILRLHHQKRQMSSPLPCGAHLAPPPHQPLRLSPLPHQAFCVSPIMATSPNTLTVHHTASGPARIPSPRELAAHTQSIMHSALIKKKLEEQRENYRRRHEMQQLQQQQQQQHVKQSTPISFTPTSVLRKMTAEKESDSPSPKQWQSNKIPQGRPIVKGNQSGPVPMNYNPVSNDYQHYMNQQQQMPGGVRQFPLQQQRQQGPNTYNNINNMNRGMSGGTTLHQLLVQSHQRSMNELGGGGAAGGDNQLARWFSPELLARASAGKLPSVHVPNALSLEELERHHAPTPPARN

Uniprot

A0A2H1VCK0 A0A2W1BHX2 A0A437BFH0 A0A212FMR8 A0A1Y1LBH6 A0A1Y1L9F1 + More
A0A1Y1L9G1 A0A1Y1LF87 A0A1Y1L985 E0W3R4 A0A1Y1LBG5 A0A1Y1L976 A0A1B6E3J1 A0A3Q0JN00

Pubmed

28756777 22118469 28004739 20566863

EMBL

ODYU01001832 SOQ38570.1 KZ150081 PZC73871.1 RSAL01000071 RVE49119.1 + More
AGBW02007651 OWR55044.1 GEZM01061892 JAV70248.1 GEZM01061904 JAV70234.1 GEZM01061896 JAV70244.1 GEZM01061902 JAV70236.1 GEZM01061897 JAV70243.1 DS235882 EEB20270.1 GEZM01061901 JAV70238.1 GEZM01061900 JAV70239.1 GEDC01004810 JAS32488.1

Proteomes

UP000283053 UP000007151 UP000009046 UP000079169

Pfam

PF10477 EIF4E-T

Interpro

IPR018862 eIF4E-T

ProteinModelPortal

A0A2H1VCK0 A0A2W1BHX2 A0A437BFH0 A0A212FMR8 A0A1Y1LBH6 A0A1Y1L9F1 + More
A0A1Y1L9G1 A0A1Y1LF87 A0A1Y1L985 E0W3R4 A0A1Y1LBG5 A0A1Y1L976 A0A1B6E3J1 A0A3Q0JN00

PDB

5ANR E-value=0.000889171, Score=103

KEGG

101742550 K18728 eukaryotic translation initiation factor 4E transporter | (RefSeq) eukaryotic translation ini

GO

GO:0003743

PANTHER

PTHR12269

Length:

751

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00033

Exp number, first 60 AAs:

0.00033

Total prob of N-in:

0.00006

outside

1 - 751

Pi

182.009346

Theta

152.981362

Tajima's D

0.318491

CLR

0.675837

CSRT

0.459977001149942

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics