Gene

KWMTBOMO09525

Pre Gene Modal

BGIBMGA013039

Annotation

PREDICTED:_uncharacterized_protein_LOC101742843_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr16(-):3220262-3223919      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.165 PlasmaMembrane   Reliability : 1.82

CDS

ATGTCGCTTCTGTTTTTATTGGTGGGTGTTTGTGTAACGCTTGTCAGTGGACAGACCACAGGGGTTAGTCAATGTATTAGAAACGAAGGAGACCTTCCGATAAACACGTACATCCACGGATGTTCGGAGCCGCCGTGCTCTCTGCCACAGCTGCAGGACTGCGTTATTGACATCATATTCCAAGCACCTCGCGTTATCCGCAATATGAAAACGTTAGCCACGGCCTACATAAACATCGGGATCCACAACGTGCCGGTCCCATATGATCTTGGCGAACACGCCATCACCTGCAACTTCCTCACAAACACCTACTGTCCGCTGCTGGCTGGCGAGGTTGCGACCTACACGTTGAAAATGTTCATCGAGCCGTTCTTCCCTCAGGGTACTTCAGTTACAATCGAATTCAGGATCGTGGATGAACGGGATGTACCTGTTTTGTGCCTCCGAGTTCCAATCACGATCGCTCCGCCCCTAACAAGCCCGACCAAAACACACCACTTAAGTGAACATGTTTATAACGCAACGAAACTAGATGGCGCTAGTTGA

Protein

MSLLFLLVGVCVTLVSGQTTGVSQCIRNEGDLPINTYIHGCSEPPCSLPQLQDCVIDIIFQAPRVIRNMKTLATAYINIGIHNVPVPYDLGEHAITCNFLTNTYCPLLAGEVATYTLKMFIEPFFPQGTSVTIEFRIVDERDVPVLCLRVPITIAPPLTSPTKTHHLSEHVYNATKLDGAS

Uniprot

A0A023PLP0   A0A2W1BJN0   A0A1E1WD61   A0A194Q0H6   A0A2A4JC51   A0A0N0PCG0   + More
A0A2H1WD39   A0A0K8SI89   A0A2W1BYA3   A0A3S2NUN1   A0A2A4JD07   A0A194Q180   A0A194Q0H2   A0A0N1PIP3   A0A2W1BQA7   A0A212FFA3   A0A0L7L650   A0A1E1WVI3   A0A2H1V6B0   A0A2H1V7L1   A0A182MF63   T1DNE1   A0A1B0CC72   A0A182W0P8   A0A182P285   W5JES4   A0A182JWL7   A0A1B0DP97   A0A1L8DQ67   A0A182KGL4   K7J304   A0A1L8DQ47   A0A182NJY2   A0A182FGL1   A0A1B0CC74   A0A182FQR9   A0A182KQM0   A0A182QV48   A0A1A9Y8V1   A0A1L8DQC6   A0A139WI11   Q7QJ15   A0A182I2P3   A0A182TXJ5   A0A1A9VAV6   A0A182UYS5   A0A182JEZ5   A0A340TBF0   A0A1A9ZHC2   A0A1B0G217   A0A182PDN7   A7USS7   T1DFE1   A0A182IZ34   B3M1F7   A0A182UZN5   A0A182LGE4   A0A182VYS4   A0A182PSP0   A0A084VC71   A0A1A9Y642   K7J305   A0A182UI13   A0A232EM86   A0A1B0CC73  

Pubmed

24730650    28756777    26354079    22118469    26227816    20920257    + More
23761445    20075255    20966253    18362917    19820115    12364791    14747013    17210077    17994087    24438588    28648823   

EMBL

KJ439235    AHX25886.1    KZ150081    PZC73874.1    GDQN01006112    JAT84942.1    + More
KQ459582    KPI99082.1    NWSH01001926    PCG69655.1    KQ460651    KPJ12995.1    ODYU01007802    SOQ50876.1    GBRD01014275    GBRD01012803    JAG53023.1    KZ149898    PZC78635.1    RSAL01000071    RVE49122.1    NWSH01001867    PCG69851.1    KPI99078.1    KPI99077.1    KPJ13001.1    PZC73873.1    AGBW02008843    OWR52407.1    JTDY01002775    KOB70754.1    GDQN01000238    JAT90816.1    ODYU01000906    SOQ36371.1    ODYU01000907    SOQ36372.1    AXCM01000754    GAMD01002965    JAA98625.1    AJWK01006215    ADMH02001605    ETN61843.1    AJVK01018123    GFDF01005492    JAV08592.1    GFDF01005491    JAV08593.1    AXCN02000326    GFDF01005490    JAV08594.1    KQ971342    KYB27613.1    AAAB01008807    EAA04248.1    APCN01000178    CCAG010020620    AAAB01008859    EDO64212.2    GAMD01003171    JAA98419.1    CH902617    EDV42184.1    ATLV01010520    KE524585    KFB35565.1    NNAY01003399    OXU19475.1   

Proteomes

UP000053268    UP000218220    UP000053240    UP000283053    UP000007151    UP000037510    + More
UP000075883    UP000092461    UP000075920    UP000075885    UP000000673    UP000075881    UP000092462    UP000002358    UP000075884    UP000069272    UP000075882    UP000075886    UP000092443    UP000007266    UP000007062    UP000075840    UP000075902    UP000078200    UP000075903    UP000075880    UP000092445    UP000092444    UP000007801    UP000030765    UP000215335   

Pfam

PF02221   E1_DerP2_DerF2

Interpro

IPR014756   Ig_E-set        + More
IPR003172   ML_dom       
IPR039670   NPC2-like       
IPR033916   ML_Npc2-like       

SUPFAM

SSF81296   SSF81296       

CDD

cd00916  Npc2_like

ProteinModelPortal

A0A023PLP0   A0A2W1BJN0   A0A1E1WD61   A0A194Q0H6   A0A2A4JC51   A0A0N0PCG0   + More
A0A2H1WD39   A0A0K8SI89   A0A2W1BYA3   A0A3S2NUN1   A0A2A4JD07   A0A194Q180   A0A194Q0H2   A0A0N1PIP3   A0A2W1BQA7   A0A212FFA3   A0A0L7L650   A0A1E1WVI3   A0A2H1V6B0   A0A2H1V7L1   A0A182MF63   T1DNE1   A0A1B0CC72   A0A182W0P8   A0A182P285   W5JES4   A0A182JWL7   A0A1B0DP97   A0A1L8DQ67   A0A182KGL4   K7J304   A0A1L8DQ47   A0A182NJY2   A0A182FGL1   A0A1B0CC74   A0A182FQR9   A0A182KQM0   A0A182QV48   A0A1A9Y8V1   A0A1L8DQC6   A0A139WI11   Q7QJ15   A0A182I2P3   A0A182TXJ5   A0A1A9VAV6   A0A182UYS5   A0A182JEZ5   A0A340TBF0   A0A1A9ZHC2   A0A1B0G217   A0A182PDN7   A7USS7   T1DFE1   A0A182IZ34   B3M1F7   A0A182UZN5   A0A182LGE4   A0A182VYS4   A0A182PSP0   A0A084VC71   A0A1A9Y642   K7J305   A0A182UI13   A0A232EM86   A0A1B0CC73  

PDB

3WEB     E-value=0.0460299,     Score=81

KEGG

101742843    K13443 Niemann-Pick C2 protein | (RefSeq) uncharacterized LOC101742843

PATHWAY

04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0032367   GO:0005623   GO:0015918   GO:0032934   GO:0016021  

PANTHER

PTHR11306  

SignalP

Position:   1 - 17,         Likelihood:  0.998594

 

 

Length:

181

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.03963

Exp number, first 60 AAs:

1.01791

Total prob of N-in:

0.04175

outside

1  -  181

 

 

Pi

155.356054

Theta

143.213766

Tajima's D

0.367128

CLR

0.664264

CSRT

0.473426328683566

Interpretation

Uncertain