SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09520
Annotation
PREDICTED:_uncharacterized_protein_LOC106129850_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.827
 

Sequence

CDS
ATGGCACGAAGCACAACAGAAGATTATACAAGGTCCAGTGACAAACGAGAACGCAGCTCAAGCAGAAGCACAAATGTTCCTTTACATTTTGCAATTCACAAGCCCGGCTGCCATTTTGAGAGCTGCTGTGGCATTTGTAATTTATTTCCAGGGGTGCTACTAATTGCCTTCTGCCAGGTATTAGTCGGCACCGTCCTACTGACCCTCATCTTGACCCATGGGAAGCAATATGATGATATGCACCAGACTTCGAAAACCCAATTCATGAGTGTCGCTTCCGGTGCAATTCTGAGTGGTATTACTGGAGCCGGTTTGCTCCTCATCATTGTGGCTCTAACCGAAAACTGCCGAGCTATGTTGATTTACCTTCTAGTTGCAGCTATCGTCTGGATGGGTATCATAGCATTGGCCGTGACTAAAATCACTCGTTCCTGTGTACGATTTAAAGACGGTTCGTGA
Protein
MARSTTEDYTRSSDKRERSSSRSTNVPLHFAIHKPGCHFESCCGICNLFPGVLLIAFCQVLVGTVLLTLILTHGKQYDDMHQTSKTQFMSVASGAILSGITGAGLLLIIVALTENCRAMLIYLLVAAIVWMGIIALAVTKITRSCVRFKDGS

Summary

Ontologies

Topology

Length:
152
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
66.91321
Exp number, first 60 AAs:
11.81371
Total prob of N-in:
0.68143
POSSIBLE N-term signal
sequence
inside
1  -  48
TMhelix
49  -  71
outside
72  -  90
TMhelix
91  -  113
inside
114  -  119
TMhelix
120  -  142
outside
143  -  152
 
 

Population Genetic Test Statistics

Pi
221.983803
Theta
173.826855
Tajima's D
0.99582
CLR
0.781845
CSRT
0.662566871656417
Interpretation
Uncertain
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