SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09518  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013047
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_p270_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.617 PlasmaMembrane   Reliability : 1.164
 

Sequence

CDS
ATGTTAGCCAATCGGATCTCCTATTGGCTCGGCGTAACCGGTCCATCATACACCGTCGACTCGGCTTGTTCGAGCTCCCTATACGCCTTGGAACACGCCTTCAGAGCTATCAGGGATGGGCACTGTGACGCGGCCATTGTCGGGGGATCAAACCTGTGTCTCCATCCCTTCGTATCTTTGCAGTTCTCTAGATTGGGAGTATTGTCCCCGGACGGCAAGTGCAAGAGCTTTGATAACAGTGCTAATGGCTACGCTCGCTCTGAAGCCATAGTCGTTTGCTTCTTGCAAAAAGCCAAGGACTCGAGGAGGGTATACGCACAGCTCCTTCACGCCAAAACCAACTGTGACGGCTACAAGGAACAGGGTATTACGTACCCGGCCGGTCACATTCAGAAGTTGCTACTCCGAGAGTTCTACGAGGAGTGCTCGATCCCGCCGTCCGAATTGGAATTCGTCGAGGCTCATGGAACAGGTACTCGAGTGGGTGACCCCGAAGAGCTGTTGGCTATTGATGAAATTTTCTGCACGGGTCGTTCCGGGCCACTACTCCTAGGTTCCATAAAGTCGAACCTTGGACATTCAGAGCCTGCATCTGGCTTATGTTCTATAGCTAAAATGTGCATAGCCTACACTACTGGGTACATTCCGCCCAACTTGAACTACAGCATTCCTCGAGAAGGAGTATCGGCTCTCGTCGATGGGAGAATGAATGTAATCACAGACAAGCAGCCTTGGAACAGAGGGATGTCGGGAATCAACAGTTTTGGTTTTGGTGGCGCAAACGCTCACGTTCTTTTGAAGAATGTAGCTAGGGACAAGGTAAATAATGGAATTCCCAAAGACGATCTACCCCGTCTTGTGTGTGCATCGGGGCGAACCGAATCAGCTGTGGCGCGAATCTTTGATGATCTCGAATCCAGGACCGTTGATGCTGAATTAGTCAGACTTTTACATTCCATCCATGATCAAGACATCGCTGGCCACGTTGTTAGAGGATTTACGTTATTGGGTTCTACACCAACGAAGAGTGAATCATTAGCTAGAGATATCCAATACTATTCCGGTGTACGTCGTCCTGTTTGGTTTGTGTATTCTGGCATGGGCTCGCAGTGGCCTGGAATGGGCGCTCAACTAATGAGGATACCCGTGTTTGCTGCTGCCATCGAAAAATGTAATAATGTCCTTAAACCAAAAGGCATTAACGTGGTCAAGATCATCACCGATTCCGACCCCAAAATGTTTGATGATGTCCTAAATTCTTTCGTCGGTATTGCGGCCATTCAGATCGGTCTTACTGACGTCCTGAAAAGTGTTGGCATTGAGCCTGACCATATTATCGGGCACAGTGTCGGTGAATTGGGCTGTGCCTATGCCGACGGATGTTTCACCGCGGAGCAGATGATCCTGTCGGCTTACAGTAGAGGTCTTGCTTCCGTCGAGACGACCCTCATCAAGGGGTCCATGGCGGCTGTGGGGCTTGGTTATAGTCAAGTAAAATCCATGTGCCCACCCGAGATCGTCGTAGCGTGTCACAACGGCCCGGACTCCAGTACTGTTGCTGGCCCAGCTGACGCCATGAAAGCTTTTGTGGCTAAGCTGACGGCACAAGGAATCTTCGCTAAAGAAGTTCCTAGCTCAAACATTGCTTACCATTCGAAGTATGTCGCAGAAGCAGGACCAAAACTACTGAAATATCTCAGTCAAGTGATCCCATCGCCGAAGCCTCGCACAGAACGCTGGGTTTCAACCTCCATACCACAATCTCAATGGAAAGAGAGCAAAGCTCGACTGTCTTCCGCTGAATATCACACAAACAATTTACTGAGCCCAGTTCTTTTCGAGGAAGCGTCCAGTTTGATCCACAACAATGCCATAACCATCGAGATTGCTCCCCACGGTCTGTTACAAGCAATCCTGCGACGATCCTTGAAGAAGGATGTCATTAACATTCCACTGACCCAAAGGGGCCATAGCGATAACGTGCAAGTACTATTGACAGCTCTGGGCAACTTGTATGAATCAGGACTGAACCCGCATCTCGCAAACATCTACCCTCACATACCGTTCCCAGTGTCGCAAGGTACTCCAATGTTGGCGCATTTGGTTGAATGGGAACATAGTGAAGATTGGTATGTGACATCGTACAAGGCTCAGGATAAGATGAAATCAGGAGAACGTACTGTTAGGATGTCTATCGTTGATGAAGACAGCGAGTATATGGCCGGACACGTTGTCGACGGACGCAATTTATATCCCGCAACCGGGTATCTAGTCCTTGTCTGGGAGACTTTGGGTATGATGATGGGAGAACTCTACACGGAGGTATCAGTAGTATTCGAGAACGTTCGATTCCAGCGTGCCACTAATATCCCGAAGGAAGGAAACTTGGAGTTCATTATTATGATACAAAAAGGCAGCGGTAATTTTGAGATTGTGGAAAGCGGAGCGTCAATTGTAACGGGAAGGATCTATGCGAAGAAAAACGTAGGTCAAGATTACCGGGTGTTGCCCTTCCCGAAGGAAGAAACCGGACCTAATATCAAACACTTACTCACTAAGGACTTTTATAAGGAGTTGCGTCTGAGAGGCTATCAATATAGTGGTCTCTTCCGCGGAGTTCTGGGCTGTAACGTAGAGGGATCCCGCGGCCGACTAGCCTGGGTCAACAATTGGGTCACCTTTATGGACTGCATGCTCCAACTGAAGATCATAGGTCAGGACACACGGGGGCTATTCGTACCCACAAGGATCGAGAAACTTTCCATTGACGCAAAAATGCATTATTACGCCATATCGAAGATGAACCCTGACGCCAATAGGCAATCCTTTGAAGTTCGCGTCTATAACGAAGTGGATGTTATAAGGGCAGGTGGAGTTGAAATTAGAGGTCTCAATGCAACTCCGATCACTAAAAGACTACCTTTGGGCGTACCTGTGCTGGAAAAGAATGAATTCATACCATTCAGCTCTAACACAAAGATGACCGTTGAGGATACTCTGAGATCAGACATTCAACTTATACTGGAAAACATTCAAACGTACAAAGTAAAAACCATCGAGTTAGTAGACGAAGAATACAAGAGCAACGCCCTGGAGCCATTAATAGAGAAGGTCGGAGAGTTGTTGGGAGATCTGCCTTTAGTACAAGCTGAGCTTCTTTTGATTTCTGAAGATCCTATTGAAATGCCGTCAAACGTTACAGTGGAGAACAAGAAATTAACCGGAGAAACGAATACCGTTATATTTATTGGGGCGAATCTGCTAGAGAGACCAGATGTCCTTCGCCAAGCCATATCGACTCTTCGTGACAAATGTTTCATCATAAGTCGCGAGAAAGACCGCCCCGACCCTAAGACGTATGCCGACAAATACGATATCATCACTATACAAGACACGGGATCAGAATATTTAGTGCTCTTTAGAAAGAGGGTGGGGGCTAGACCAGCGAAATTCGTCAGAATAGTCACCGCAGATGATACCTTCTCTTGGATTGACAAAGTAAAAGAAGAATTAAAGGAAGGTCAAAAAATAGTGTTGTATAGTCAAGACGAACATATCAATGGATTATTGGGCTTGGTTAACTGCTTGAGGAAAGAGCCTGGTGGTGAGATCGTGTATGGTCTGTTGATTAATGATCCTTCAGCACCACCCTTCGATCCCGACCTTGAATTTTATGAAGAGCAACTGGACAAAGACTTGGCCATAAATGTTTATCAGGATGGCCAATGGGGTACATACCGTCATCTTTTACTCGGTGATTTGGACACAGTAAAAGCTAAGCACGCCTACGTGAACACGATCACCATCGGTGATCTGTCCTCATTGAGATGGCTCGAAGGACCATTAAGACCGAACCACGTTTTCAAGAACCCTGACGAAATACTCATAAACGTGTACTGTACAGCTCTGAATTTCCGTGACATAATGACGGCGACAGGTCGTGTTACTGTTGACGCTGTGGCCAGCGGGCGACTTGCACAGGAGTGCGTGCAAGGATTCGAAGTTGTCGGACGGACGGCTAACGGTTCCCGGGTGATGGGCATGATCCGTAATAAGGGATTGTCGAATTTGGCTGCCGGTGATAAGGCCTTGCTCTGGAGCATCCCAGACGAATGGACATTCGAGGAAGCTGCCACAATACCCGTCGCTTACGGAACTGTTTATTATGCAATGGTTATGGTTGCTCAAATCAAACGCGGCGAGTCAATCCTCATCCACGCCGGATCTGGTGGAGTGGGTCAAGCAGCCATCAGCGTTGCGCTTCATTACGGCTGCGAGGTCTTCACCACTGTCGGTACCGCGGAGAAGAGGGCTTTCATTAAAAAGCTCTTCCCAGCACTCAAAGATAGCCACATAGGAAATTCCCGTGACATTACCTTCGAAGATATGGTTCGTAGAGAAACGAACGGAAAAGGTGTCGACATTGTCCTCAACTCATTGTCGGACGAGAAATTACAGGCCTCGGTAAGGTGTCTGACGTACAGAGGTCGTTTCCTAGAAATCGGAAAGTTTGATATCAGTAACAACACGCCTATCGGGATGTACTTCTTCTTGAAGGAGACTTCCTTCCACGGTATTATGTTGGATTACATCTTCGATCAGAGTGACGAGTTCAGAAGGGGCTTGCAAGATCTCCTTCTAAGCGGGATCATAAATGGCGCGGTCCGTCCTCTGACATATTGTACGTTCGAGAAGAATGAAGTTGAAACCGCCTTCCGTTATATGGCCGCAGGAAAACATATTGGCAAGGTAATTGTCAAAATACGCGACGAGGAACCAAGAGAGGAGGGACCAGTAAGACCAACGATAATTCCTGTGGATGCCCTTCCGAGGTACATTTGCAACGAGAACAATGTCTATGTAGTGGTCGGAGGACTTGGTGGCTTTGGCCTGGAGCTAGCAGACTGGCTAATTCTCAGAGGAGCCAGGAAGCTAGTACTGAACTCCAGAAGAGGACTCAGCAATGGATACCAATCCTCAAGATTAAGAGCATGGACTTCCTACGGTGCTGAAATCCACATCTCCACTCATGACATTACAACCTACACTGGCTGCGAAGAAATGATCAAAATGGCCAACGCGCTAGGGCACGTGGACGCAATCTTCAATCTCGCAGTCGTACTCAAAGACTCAATCTTCCAGAACCAAACTCCTGAAACTTTTAAGACCTCGTTTGGACCTAAGGCCATCGCCACAATGCACCTGGACAAAGTCACCCAGAAGCTTTGTCCCGGTCTGAAGGACTTCGTTATCTTTTCATCCGTATCCTGTGGTCGTGGGAACGCTGGTCAAACCAATTATGGTATGTCCAACTCTGTCATGGAGAGAATCTGTGAGTCCAGAAAGAAAATCGGACTACCTGCTCTGGCGGTACAGTGGGGAGCCGTTGGAGATGTCGGTTTAGTAGCAGATATGCAAGACGAAGACGTCCAGCTAGAGATCGGTGGAACTCTTCAACAAAGAATATCTTCATGTCTCCTAGCCTTAGATAAATTCATGAAGCAGGACGCTCCTATAGTTTCATCCATTGTGGTTGCCGAGAAGAAGGCCGGCGGCACTGGATGTGGAAATATTGTGGATGCTGTTGCTCAGATAATGGGTATAAAAGACTTGAAGACCGTATCACAGCAAGTGTCTTTGGCGGAGTTGGGTATGGACAGTATGATGGCAGTAGAAATCAAACAGACCTTAGAGAGAGAATTCGAGATATTCTTAACGGCTCAAGATATTAGGACGCTTACATTTGCAAGGTAA
Protein
MLANRISYWLGVTGPSYTVDSACSSSLYALEHAFRAIRDGHCDAAIVGGSNLCLHPFVSLQFSRLGVLSPDGKCKSFDNSANGYARSEAIVVCFLQKAKDSRRVYAQLLHAKTNCDGYKEQGITYPAGHIQKLLLREFYEECSIPPSELEFVEAHGTGTRVGDPEELLAIDEIFCTGRSGPLLLGSIKSNLGHSEPASGLCSIAKMCIAYTTGYIPPNLNYSIPREGVSALVDGRMNVITDKQPWNRGMSGINSFGFGGANAHVLLKNVARDKVNNGIPKDDLPRLVCASGRTESAVARIFDDLESRTVDAELVRLLHSIHDQDIAGHVVRGFTLLGSTPTKSESLARDIQYYSGVRRPVWFVYSGMGSQWPGMGAQLMRIPVFAAAIEKCNNVLKPKGINVVKIITDSDPKMFDDVLNSFVGIAAIQIGLTDVLKSVGIEPDHIIGHSVGELGCAYADGCFTAEQMILSAYSRGLASVETTLIKGSMAAVGLGYSQVKSMCPPEIVVACHNGPDSSTVAGPADAMKAFVAKLTAQGIFAKEVPSSNIAYHSKYVAEAGPKLLKYLSQVIPSPKPRTERWVSTSIPQSQWKESKARLSSAEYHTNNLLSPVLFEEASSLIHNNAITIEIAPHGLLQAILRRSLKKDVINIPLTQRGHSDNVQVLLTALGNLYESGLNPHLANIYPHIPFPVSQGTPMLAHLVEWEHSEDWYVTSYKAQDKMKSGERTVRMSIVDEDSEYMAGHVVDGRNLYPATGYLVLVWETLGMMMGELYTEVSVVFENVRFQRATNIPKEGNLEFIIMIQKGSGNFEIVESGASIVTGRIYAKKNVGQDYRVLPFPKEETGPNIKHLLTKDFYKELRLRGYQYSGLFRGVLGCNVEGSRGRLAWVNNWVTFMDCMLQLKIIGQDTRGLFVPTRIEKLSIDAKMHYYAISKMNPDANRQSFEVRVYNEVDVIRAGGVEIRGLNATPITKRLPLGVPVLEKNEFIPFSSNTKMTVEDTLRSDIQLILENIQTYKVKTIELVDEEYKSNALEPLIEKVGELLGDLPLVQAELLLISEDPIEMPSNVTVENKKLTGETNTVIFIGANLLERPDVLRQAISTLRDKCFIISREKDRPDPKTYADKYDIITIQDTGSEYLVLFRKRVGARPAKFVRIVTADDTFSWIDKVKEELKEGQKIVLYSQDEHINGLLGLVNCLRKEPGGEIVYGLLINDPSAPPFDPDLEFYEEQLDKDLAINVYQDGQWGTYRHLLLGDLDTVKAKHAYVNTITIGDLSSLRWLEGPLRPNHVFKNPDEILINVYCTALNFRDIMTATGRVTVDAVASGRLAQECVQGFEVVGRTANGSRVMGMIRNKGLSNLAAGDKALLWSIPDEWTFEEAATIPVAYGTVYYAMVMVAQIKRGESILIHAGSGGVGQAAISVALHYGCEVFTTVGTAEKRAFIKKLFPALKDSHIGNSRDITFEDMVRRETNGKGVDIVLNSLSDEKLQASVRCLTYRGRFLEIGKFDISNNTPIGMYFFLKETSFHGIMLDYIFDQSDEFRRGLQDLLLSGIINGAVRPLTYCTFEKNEVETAFRYMAAGKHIGKVIVKIRDEEPREEGPVRPTIIPVDALPRYICNENNVYVVVGGLGGFGLELADWLILRGARKLVLNSRRGLSNGYQSSRLRAWTSYGAEIHISTHDITTYTGCEEMIKMANALGHVDAIFNLAVVLKDSIFQNQTPETFKTSFGPKAIATMHLDKVTQKLCPGLKDFVIFSSVSCGRGNAGQTNYGMSNSVMERICESRKKIGLPALAVQWGAVGDVGLVADMQDEDVQLEIGGTLQQRISSCLLALDKFMKQDAPIVSSIVVAEKKAGGTGCGNIVDAVAQIMGIKDLKTVSQQVSLAELGMDSMMAVEIKQTLEREFEIFLTAQDIRTLTFAR

Summary

EMBL
U67867    AAB53258.1    NWSH01003873    PCG65731.1    PCG65733.1    KQ459582    + More
KPI99075.1    AGBW02007651    OWR55047.1    KQ460651    KPJ13003.1    ODYU01011246    SOQ56864.1    ODYU01006431    SOQ48269.1    GEDC01024813    JAS12485.1    GECU01006695    JAT01012.1    GECU01021338    JAS86368.1    KK852680    KDR18643.1    NNAY01001760    OXU23005.1    KM507100    AKM28424.1    OXU23004.1    ABLF02036897    GL445739    EFN89136.1    KQ981856    KYN34617.1    GL438820    EFN68400.1    GGMS01017661    MBY86864.1    ODYU01002245    SOQ39471.1    KQ761246    OAD57941.1    GL888175    EGI66082.1    KQ435885    KOX69550.1    KQ976440    KYM86527.1    ADTU01005072    ADTU01005073    ADTU01005074    ADTU01005075    KQ977574    KYN01849.1    KQ414663    KOC65238.1    LBMM01000911    KMQ97230.1    KK107139    EZA57700.1    ODYU01009273    SOQ53573.1    KQ434960    KZC12654.1    DS231997    EDS30986.1    NEVH01022635    PNF18741.1    JXUM01076840    KQ562972    KXJ74732.1    CH477489    EAT40085.1    GFDL01004709    JAV30336.1    ATLV01015783    ATLV01015784    KE525036    KFB40722.1    CVRI01000051    CRK99509.1    DS235784    EEB16951.1    UFQT01000602    SSX25625.1    CRK99510.1    AXCM01001692    AXCN02000191    GECZ01010430    JAS59339.1    UFQS01001117    UFQT01001117    SSX09070.1    SSX28981.1    APCN01002072    AAAB01008987    EAA01044.4    CH964272    EDW84866.1    CH933806    EDW14645.2    CP012526    ALC46026.1    GAMC01019372    JAB87183.1    CH940650    EDW67835.2    OUUW01000014    SPP88346.1    CM000070    EDY68457.3    KA644718    AFP59347.1    GBXI01000719    JAD13573.1    GBXI01003003    JAD11289.1    AE014296    EAA46042.3    JRES01001625    KNC21349.1    GAKP01015045    JAC43907.1    GAKP01015046    JAC43906.1    CH893166    KRK05689.1    CH954177    EDV60008.2    CH916373    EDV94356.1    CCAG010013878    GEDC01016862    GEDC01012243    JAS20436.1    JAS25055.1    GEDC01031101    GEDC01028079    GEDC01018856    GEDC01013285    JAS06197.1    JAS09219.1    JAS18442.1    JAS24013.1    GEDC01031722    GEDC01008387    JAS05576.1    JAS28911.1    CCAG010001609    KX467777    AOA60273.1   
Pfam
PF08659   KR        + More
PF14765   PS-DH
PF02801   Ketoacyl-synt_C
PF00975   Thioesterase
PF00107   ADH_zinc_N
PF00698   Acyl_transf_1
PF16197   KAsynt_C_assoc
PF00550   PP-binding
PF00109   ketoacyl-synt
Interpro
IPR013968   PKS_KR        + More
IPR014030   Ketoacyl_synth_N       
IPR020843   PKS_ER       
IPR016039   Thiolase-like       
IPR020801   PKS_acyl_transferase       
IPR020841   PKS_Beta-ketoAc_synthase_dom       
IPR029058   AB_hydrolase       
IPR020807   PKS_dehydratase       
IPR001227   Ac_transferase_dom_sf       
IPR016036   Malonyl_transacylase_ACP-bd       
IPR036736   ACP-like_sf       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR014031   Ketoacyl_synth_C       
IPR023102   Fatty_acid_synthase_dom_2       
IPR009081   PP-bd_ACP       
IPR042104   PKS_dehydratase_sf       
IPR020806   PKS_PP-bd       
IPR011032   GroES-like_sf       
IPR032821   KAsynt_C_assoc       
IPR013149   ADH_C       
IPR001031   Thioesterase       
IPR014043   Acyl_transferase       
IPR036291   NAD(P)-bd_dom_sf       
IPR018201   Ketoacyl_synth_AS       
IPR006162   Ppantetheine_attach_site       
SUPFAM
SSF55048   SSF55048        + More
SSF50129   SSF50129       
SSF51735   SSF51735       
SSF52151   SSF52151       
SSF53474   SSF53474       
SSF47336   SSF47336       
SSF53901   SSF53901       
PDB
6FN6     E-value=0,     Score=2302

Ontologies

Topology

Length:
1917
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.63253
Exp number, first 60 AAs:
0.15228
Total prob of N-in:
0.00739
outside
1  -  1917
 
 

Population Genetic Test Statistics

Pi
253.212302
Theta
183.438102
Tajima's D
1.347453
CLR
0.27146
CSRT
0.75631218439078
Interpretation
Uncertain
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