Gene

KWMTBOMO09517  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013047

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_p270_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr16(-):2955765-2958526      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.909

CDS

ATGTTCATGGTACCGGGCTTAGAAGGCTGTGCTGCTGTCCTCGAACCGCTGTGTCGTAGATTAAAGACAAAGGTCTGCGTTTTGCAACTCGGAGTCGAACATAAAAACGAAAATTTGGAACAGATGGTGGACCGCCTTTACCAGACCGCTATTTCAAAAATAACACCGGGAACTCCATTCTGGCTTCTTGGATATAGTTTTGGATCATTGTTGACTTTGGAGCTGGCTGCCAGATTGGAGAGAGAAGGCTACCACGGTGTGGTGTTCTGCTTGGACGGCGCTCCGGAGTTCCTTCACGCGATCCTCACCATGACGATCAGTTTCAAAAACGACTTCCAACTCCAGAACAGCCTCATCTGCCACACGATAGACATCGTGGCCCCGAACAACACAATCGGGAAAGAGCTAATGGAAAAACTGAACGAATATGAATCTTACGAGGAAAGAGTTGAGGTCGCTATTAAAATGTCTCCCATACAAACTAAATATTCAGATAAATTCATCGGTGCCATAGCTGCGGCAAGTTACGACCGTCTTAAAGTAGTCCTAAATTATAATACGAAGACTGTAAACAAATTGAAATCGCCGATAGTTCTTATGCGTCCGAAAGAGAATCCTCCTAACGTTACCTGTGAGGACAACTATAGCTTGGATAAATTTTCTGATAATTTAACAGTGCATTTCTTGGAAGGTAACCACGTTAGTATAATTGAGAACAAAGATTGCGCTAATATAATAAACAGAATGTTGGCTGAACGCGATGATAAAACGGGCAAAGTGAGTGATAATGTTGTAACTAACATGTTAGAAAATCAAAGGGAGGTTAAAGTTTAA

Protein

MFMVPGLEGCAAVLEPLCRRLKTKVCVLQLGVEHKNENLEQMVDRLYQTAISKITPGTPFWLLGYSFGSLLTLELAARLEREGYHGVVFCLDGAPEFLHAILTMTISFKNDFQLQNSLICHTIDIVAPNNTIGKELMEKLNEYESYEERVEVAIKMSPIQTKYSDKFIGAIAAASYDRLKVVLNYNTKTVNKLKSPIVLMRPKENPPNVTCEDNYSLDKFSDNLTVHFLEGNHVSIIENKDCANIINRMLAERDDKTGKVSDNVVTNMLENQREVKV

Uniprot

H9JU35   O01678   A0A2A4J169   A0A0L7LLV0   A0A0N0PCG3   I4DP18   + More
A0A2W1B1K4   A0A2H1WSB0   A0A194Q6Q7   A0A212FMU5   A0A2H1VFB6   A0A2J7PFX6   A0A2J7PFX2   A0A1B6CGM1   A0A1B6GFS4   A0A1B6JP24   A0A2S2NJ15   A0A2J7PFE6   A0A2J7PFE4   A0A1B6KCK1   A0A0G3YL52   A0A2S2RA89   A0A1W4XV87   J9K3D3   A0A232EXC2   A0A2J7PQY0   A0A0L7LMK6   K7IZC8   A0A1L8D6D5   A0A3S2NJM7   E0VU95   A0A0C9R0U2   H9JGF5   A0A154PMH1   O01677   A0A0L7LMY3   A0A0J7NXT7   A0A0L7R328   A0A437BUA6   A0A195CX87   B0WMC9   E2BF10   A0A2H1WZR1   K7IZC9   A0A151JRB8   A0A232EX94   A0A194QW12   A0A232F4D3   A0A3Q0IWX7   E1ZXI7   A0A0L7L080   E2B583   A0A2A4JTZ4   A0A182G1R8   F4WHU0   A0A2A4JVQ1   A0A1Q3FS82   A0A182GNP7   A0A088ALX8   A0A151X165   E9J9A2   A0A310SRI2   A0A151JW84   A0A195BQW7   A0A151JWR2   E9IZ37   Q16ZI9   A0A026WQF5   A0A0J7K1P4   B4LXF7   A0A158NM87   A0A2J7Q8D7   A0A1S4FIT0   A0A151IJ25   A0A2H1V933   A0A1W4VE27   F4WIF1   B4JRG7   A0A194QFD5   A0A2A4JVR3   E9J4D9   A0A0J7MTJ2   A0A026VVU8   B4NIW4   A0A194QF64   A0A151WPM6   A0A1A9UN38   A0A182SD92   A0A182VQY2   B4K107   E9J6T5   B4KAW7   A0A182V5F6   A0A182XBL3   Q7PYE4   A0A182TPE9  

Pubmed

19121390    26227816    26354079    22651552    28756777    22118469    + More
25702953    28648823    20075255    20566863    20798317    26483478    21719571    21282665    17510324    24508170    17994087    21347285    12364791    14747013    17210077   

EMBL

BABH01003987    BABH01003988    U67867    AAB53258.1    NWSH01003873    PCG65731.1    + More
JTDY01000651    KOB76329.1    KQ460651    KPJ13005.1    AK403251    BAM19658.1    KZ150724    PZC70358.1    ODYU01010623    SOQ55856.1    KQ459582    KPI99075.1    AGBW02007651    OWR55047.1    ODYU01002245    SOQ39471.1    NEVH01025646    PNF15228.1    PNF15226.1    GEDC01024813    JAS12485.1    GECZ01008485    JAS61284.1    GECU01006695    JAT01012.1    GGMR01004548    MBY17167.1    NEVH01025661    PNF15060.1    PNF15061.1    GEBQ01031053    JAT08924.1    KM507100    AKM28424.1    GGMS01017661    MBY86864.1    ABLF02036897    NNAY01001760    OXU23005.1    NEVH01022635    PNF18738.1    JTDY01000529    KOB76788.1    GEYN01000117    JAV02012.1    RSAL01000068    RVE49259.1    DS235784    EEB16951.1    GBYB01001605    JAG71372.1    BABH01033637    KQ434960    KZC12654.1    U67866    AAB53257.1    KOB76790.1    LBMM01000911    KMQ97230.1    KQ414663    KOC65238.1    RSAL01000008    RVE53970.1    KQ977231    KYN04769.1    DS231997    EDS30986.1    GL447903    EFN85733.1    ODYU01012325    SOQ58579.1    KQ978607    KYN29892.1    OXU23002.1    KQ461073    KPJ09499.1    NNAY01001038    OXU25389.1    GL435066    EFN74070.1    JTDY01004048    KOB68669.1    GL445739    EFN89136.1    NWSH01000591    PCG75471.1    JXUM01038912    KQ561184    KXJ79436.1    GL888167    EGI66297.1    PCG75470.1    GFDL01004709    JAV30336.1    JXUM01076840    KQ562972    KXJ74732.1    KQ982587    KYQ54150.1    GL769241    EFZ10602.1    KQ761246    OAD57941.1    KQ981688    KYN37917.1    KQ976421    KYM89104.1    KQ981628    KYN38974.1    GL767078    EFZ14174.1    CH477489    EAT40085.1    KK107139    EZA57921.1    LBMM01016979    KMQ84247.1    CH940650    EDW67835.2    ADTU01020133    ADTU01020134    ADTU01020135    NEVH01016965    PNF24836.1    KQ977412    KYN02883.1    ODYU01001294    SOQ37311.1    GL888175    EGI66082.1    CH916373    EDV94357.1    KQ459053    KPJ04124.1    PCG75472.1    GL768096    EFZ12315.1    LBMM01018330    KMQ83820.1    KK107761    EZA47892.1    CH964272    EDW84866.1    KPJ04122.1    KQ982865    KYQ49767.1    CH916681    EDV90845.1    GL768341    EFZ11472.1    CH933806    EDW14645.2    AAAB01008987    EAA01044.4   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
UP000235965    UP000192223    UP000007819    UP000215335    UP000002358    UP000283053    UP000009046    UP000076502    UP000036403    UP000053825    UP000078542    UP000002320    UP000008237    UP000078492    UP000079169    UP000000311    UP000069940    UP000249989    UP000007755    UP000005203    UP000075809    UP000078541    UP000078540    UP000008820    UP000053097    UP000008792    UP000005205    UP000192221    UP000001070    UP000007798    UP000078200    UP000075901    UP000075920    UP000009192    UP000075903    UP000076407    UP000007062    UP000075902   

PRIDE

H9JU35    O01678    H9JGF5    O01677    A0A088ALX8   

Pfam

PF08659   KR        + More
PF00550   PP-binding
PF00975   Thioesterase
PF00107   ADH_zinc_N
PF14765   PS-DH
PF02801   Ketoacyl-synt_C
PF00698   Acyl_transf_1
PF16197   KAsynt_C_assoc
PF00109   ketoacyl-synt

Interpro

IPR020843   PKS_ER        + More
IPR013968   PKS_KR       
IPR029058   AB_hydrolase       
IPR023102   Fatty_acid_synthase_dom_2       
IPR036736   ACP-like_sf       
IPR036291   NAD(P)-bd_dom_sf       
IPR001031   Thioesterase       
IPR013149   ADH_C       
IPR020806   PKS_PP-bd       
IPR011032   GroES-like_sf       
IPR009081   PP-bd_ACP       
IPR042104   PKS_dehydratase_sf       
IPR014030   Ketoacyl_synth_N       
IPR016039   Thiolase-like       
IPR020801   PKS_acyl_transferase       
IPR020841   PKS_Beta-ketoAc_synthase_dom       
IPR020807   PKS_dehydratase       
IPR001227   Ac_transferase_dom_sf       
IPR016036   Malonyl_transacylase_ACP-bd       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR014031   Ketoacyl_synth_C       
IPR032821   KAsynt_C_assoc       
IPR014043   Acyl_transferase       
IPR018201   Ketoacyl_synth_AS       
IPR006162   Ppantetheine_attach_site       

SUPFAM

SSF53474   SSF53474        + More
SSF47336   SSF47336       
SSF51735   SSF51735       
SSF50129   SSF50129       
SSF55048   SSF55048       
SSF52151   SSF52151       
SSF53901   SSF53901       

Gene 3D

1.10.1200.10     1.10.1470.20     3.10.129.110     3.40.50.1820     3.40.366.10     3.40.47.10    

ProteinModelPortal

H9JU35   O01678   A0A2A4J169   A0A0L7LLV0   A0A0N0PCG3   I4DP18   + More
A0A2W1B1K4   A0A2H1WSB0   A0A194Q6Q7   A0A212FMU5   A0A2H1VFB6   A0A2J7PFX6   A0A2J7PFX2   A0A1B6CGM1   A0A1B6GFS4   A0A1B6JP24   A0A2S2NJ15   A0A2J7PFE6   A0A2J7PFE4   A0A1B6KCK1   A0A0G3YL52   A0A2S2RA89   A0A1W4XV87   J9K3D3   A0A232EXC2   A0A2J7PQY0   A0A0L7LMK6   K7IZC8   A0A1L8D6D5   A0A3S2NJM7   E0VU95   A0A0C9R0U2   H9JGF5   A0A154PMH1   O01677   A0A0L7LMY3   A0A0J7NXT7   A0A0L7R328   A0A437BUA6   A0A195CX87   B0WMC9   E2BF10   A0A2H1WZR1   K7IZC9   A0A151JRB8   A0A232EX94   A0A194QW12   A0A232F4D3   A0A3Q0IWX7   E1ZXI7   A0A0L7L080   E2B583   A0A2A4JTZ4   A0A182G1R8   F4WHU0   A0A2A4JVQ1   A0A1Q3FS82   A0A182GNP7   A0A088ALX8   A0A151X165   E9J9A2   A0A310SRI2   A0A151JW84   A0A195BQW7   A0A151JWR2   E9IZ37   Q16ZI9   A0A026WQF5   A0A0J7K1P4   B4LXF7   A0A158NM87   A0A2J7Q8D7   A0A1S4FIT0   A0A151IJ25   A0A2H1V933   A0A1W4VE27   F4WIF1   B4JRG7   A0A194QFD5   A0A2A4JVR3   E9J4D9   A0A0J7MTJ2   A0A026VVU8   B4NIW4   A0A194QF64   A0A151WPM6   A0A1A9UN38   A0A182SD92   A0A182VQY2   B4K107   E9J6T5   B4KAW7   A0A182V5F6   A0A182XBL3   Q7PYE4   A0A182TPE9  

PDB

4Z49     E-value=2.66771e-06,     Score=120

KEGG

693038    K00665 fatty acid synthase, animal type [EC:2.3.1.85] | (RefSeq) p270

GO

GO:0009058   GO:0016788   GO:0031177   GO:0004312   GO:0016491   GO:0016021   GO:0004320   GO:0004317   GO:0016295   GO:0004319   GO:0004316   GO:0102131   GO:0004313   GO:0102132   GO:0003960   GO:0016296   GO:0016740   GO:0007608   GO:0016020   GO:0005856   GO:0006108   GO:0030060   GO:0016615   GO:0000049   GO:0016876  

Length:

277

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.606299999999999

Exp number, first 60 AAs:

0.10424

Total prob of N-in:

0.00999

outside

1  -  277

 

 

Pi

199.697167

Theta

173.729858

Tajima's D

0.37147

CLR

0

CSRT

0.474026298685066

Interpretation

Uncertain