SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09512
Pre Gene Modal
BGIBMGA013050
Annotation
PREDICTED:_serine_proteinase_stubble-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 2.529
 

Sequence

CDS
ATGATTTATTTTAAAGCGATCTTCGGTGTGGTCTCTCTGGTTTTGGCTGTGGCGACGAGAACTGTACAAGCACCATTGACGTCTCCGTGTCCTGAGTATTTCACTTACGAGACATCCCCATCGACACCAGATCGGTGGCATGGCGTATTAGTGCTGCCTCCTGAAATGGTCGAAGACTACTTATGGATTTACATCGCATTGAATCGCAAAATTCATGTGTTTGGCAGCGACAGCGGGACTACCTCGACCGAAAACTTTCAAGAATTCTTAATCGATAAAAAAAAATATTTCAACTTTGATAGTGCAAAGAGTGAAGAAACTATAAGGTTTGTTACGTCCTACGATTATGCCCAGCCGATACCGCGCGTCAAGATTATAAGAGTCAATGGACGCGAAATATGCAGAGACAATAATACGACACAAGTCGGAAACGAGATAAGCTTTCCGACGCGCCCCGAGCTTCCGAATATGCTGCTTATATCAAAATTGAATGCAACCGGCTATACTCCCGAGTTTTTGTCAATTTTCCAAAACTCAACCTCTGGAGTTGCGCGATAA
Protein
MIYFKAIFGVVSLVLAVATRTVQAPLTSPCPEYFTYETSPSTPDRWHGVLVLPPEMVEDYLWIYIALNRKIHVFGSDSGTTSTENFQEFLIDKKKYFNFDSAKSEETIRFVTSYDYAQPIPRVKIIRVNGREICRDNNTTQVGNEISFPTRPELPNMLLISKLNATGYTPEFLSIFQNSTSGVAR

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF16030   GD_N        + More
PF00089   Trypsin
Interpro
IPR031986   GD_N        + More
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR018114   TRYPSIN_HIS       
IPR001254   Trypsin_dom       
SUPFAM
SSF50494   SSF50494       

Ontologies

Topology

SignalP
Position:   1 - 24,         Likelihood:  0.973748
 
 
Length:
185
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.45642
Exp number, first 60 AAs:
4.41625
Total prob of N-in:
0.25284
outside
1  -  185
 
 

Population Genetic Test Statistics

Pi
189.992474
Theta
149.359446
Tajima's D
0.706997
CLR
0
CSRT
0.577621118944053
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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