Silkworm Genome Informatics Database

Gene

KWMTBOMO09511

Pre Gene Modal

BGIBMGA014570

Annotation

PREDICTED:_serine_protease_gd-like_[Bombyx_mori]

Location

Bomo_Chr16(+):2778058-2788081 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.277 Nuclear Reliability : 1.715

CDS

ATGATAGACTCTATGGGAAGTTGTACCAAAAAAAAACTCTATGGGAAGCTCACCAGGAACTGCTTAGGAAGCGTGACGCAGGAGAACATATTCGAATTTATGATCAACAGAACGGATTTCGTAATCAACCCCGGCGAAGTGAAGAAAGTACAGTTTTATGTTGAATATAAGGTTACGATGGCTCCGCCTAAAGTAAAATATATATTGTTTAATGGACACAAAATATGCGGGCCGTCAGACTCTCTGATCCTGCGACGTTCACAGTATCGTTACCACGGGACTGATATGACTGGATGTCCTTACCGACCAGGTGCTCCGCCACCATCCTCGGAGGAGGAAACTTCTAGAAACTCAACAAATCATATACAAAGCACTACCAAGGCCGGCGTGGAGTCTAATTCAACAAAAAAGATTGAAAACACAGACGTAGAGGATTTATTAGGAGGATCAGTGACCTTTATGTTGCCGAATACAATTAATAACTATCACAACAATAGTGAACACGTTGAAAGCAAAAATATCAAAGTTCATCCGGAGTTCGACTACCAAACATTCAGAAACGACCTGAGCATTGTGGAGTTACAACGTCGAGTAACATACTCTACCTGGGTTAGGCCGGCGTGTCTCTGGCCGCAGACGCCGGTACCCGAGAAGCACCTCGCGAAAACTGGAGTGGTGGCGGGCTGGGGTTTCGATCAGTCTGGAGAACAAAATGAACTATTAACTACAATCGAAATGTCCGAGGTGGACACGCAGTCCTGTCTTCAAGCTCACGATGCTTCGTTGGCGAACTACTTAACCGATAAGGTTTACTGCGCGAAATATGTCAATGGCACTAGTAACTGCCACAACGACAGCGGGGGCGGCATGATGGTCCGAGTGAGGAACAAATGGTACCTGCGCGGCGTGCTCTCGTTCTACTACTCGCCCGAGCTGCAGCACGCCTGTCAGAGTCACGCCCTGTTCACGGACGTCGCCAAGCACCTGCCCTGGATCAAACAGCACGTCTACGACTTCTTGTGA

Protein

MIDSMGSCTKKKLYGKLTRNCLGSVTQENIFEFMINRTDFVINPGEVKKVQFYVEYKVTMAPPKVKYILFNGHKICGPSDSLILRRSQYRYHGTDMTGCPYRPGAPPPSSEEETSRNSTNHIQSTTKAGVESNSTKKIENTDVEDLLGGSVTFMLPNTINNYHNNSEHVESKNIKVHPEFDYQTFRNDLSIVELQRRVTYSTWVRPACLWPQTPVPEKHLAKTGVVAGWGFDQSGEQNELLTTIEMSEVDTQSCLQAHDASLANYLTDKVYCAKYVNGTSNCHNDSGGGMMVRVRNKWYLRGVLSFYYSPELQHACQSHALFTDVAKHLPWIKQHVYDFL

Similarity

Belongs to the peptidase S1 family.

Uniprot

A0A1Y1MB42 A0A1Y1MG09 A0A2J7QH21 A0A2J7QH45 A0A2J7QH22 A0A2J7QH17 + More
A0A067RFB7

Pubmed

28004739 24845553

EMBL

GEZM01037041 JAV82228.1 GEZM01037042 JAV82227.1 NEVH01014358 PNF27885.1 + More
PNF27883.1 PNF27884.1 PNF27882.1 KK852507 KDR22462.1

Proteomes

UP000235965 UP000027135

Pfam

PF00089 Trypsin + More
PF16030 GD_N

Interpro

IPR001314   Peptidase_S1A        + More
IPR009003   Peptidase_S1_PA
IPR001254   Trypsin_dom
IPR031986   GD_N
IPR018114   TRYPSIN_HIS

SUPFAM

SSF50494 SSF50494

CDD

cd00190 Tryp_SPc

ProteinModelPortal

A0A1Y1MB42 A0A1Y1MG09 A0A2J7QH21 A0A2J7QH45 A0A2J7QH22 A0A2J7QH17 + More
A0A067RFB7

PDB

4DJZ E-value=3.36308e-15, Score=198

KEGG

101746318 no KO assigned | (RefSeq) serine protease gd

GO

GO:0004252 GO:0016021 GO:0006508 GO:0003723 GO:0019898 GO:0005856 GO:0006108 GO:0030060 GO:0016615 GO:0000049 GO:0016876

Length:

340

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00809

Exp number, first 60 AAs:

0.00301

Total prob of N-in:

0.02887

outside

1 - 340

Pi

240.226453

Theta

187.346762

Tajima's D

3.12789

CLR

0.135973

CSRT

0.985550722463877

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree