SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09510
Pre Gene Modal
BGIBMGA014571
Annotation
PREDICTED:_serine_protease_gd-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.896 PlasmaMembrane   Reliability : 1.509
 

Sequence

CDS
ATGGCTTTTATAAATATTATATCAATTAATAGTTGTATCCCTTCACTGCTGCTCATACTGCTGGTGTCAGCTCAAACGAAGCCGCAGCCCGCGCTGGTGTCTCCGTGCCCTAGTGTCTTCGAATACGACACAAGCATACAGCATCCAGGTAGATGGTACGGCGTTATCAAGCTATCAAGCGACTACACTATCCACTCGTTGTGGTTGAACATACATCTGGACGACAACTATTCTGAGGCGTTTAAGAACTGTCTAGGGAGCGTGACGCAGGAGAACAAATACGAATTTATGATCAACAGAACGGATTTCGTAATCAACCCCGGGGAAGTGAAGAAAGTACAGATTTATGTCGAATATAACATTACGAGCTCTCCTCCTAAAATGATAGGTATAGCATTTAATGGTCGCAGAATATGCGGGCCGTCATTCGTTCTGTCCCTATTACATTCAGACTATCGTTATCACGGGACCGATATGCGGGGATGTCCTTATCGACCAAGCGCTCTGCCACCATCCTCGGAGGAGGAAACTTCCAGTAACCCAACATACAATATACAAAGCACTACCGACAGCGGCGTAGTTTCTAATCCAACAAACAAGACTGAAAACAAGGACGTTGACGATCTATTCGGCGGGCCAGTATCCTTTGCTTTGCCGGATACAGTTAATAACTTCCACAACAAGAGCGAACGCAGCCGTTGTGGTAGAATATACGCAAAATCACCTTTGGTCATTGGAGAAGCGATCGAGACCATACATTGGCCTTGGCAGGTGTTAATATTAAGGTCGATAAGCGCTCATACATATCATATGACGGACTTCAAGTATCGGTGTAGCGGCACTCTGGTTTCGACGCGGCACGTGATCACGGCTGCTCATTGTCTCACGGTCCGGGGTCAGCTCATCGAAAGAGACTTCGAATTCATTGATGCAGGGCGGCACCAGTTGCGCGTTAATGAAGATCGCATATTTGGTGTAATCAAAGATATAAAAATTCACCCGGAGTTCGACTACCAAACATTCAGAAACGACCTTAGCATTGTGGAGGCTGCGTATCGAATAAAATACTCTACCTGGGTGCAGCCGGCGTGTCTCTGGCCGCAGACTCCGGTACCCGAGAAGCACCGCGCGAAAACTGGAGTGGTGGGGGGCTGGGGTTTCGATCAGTCAGGAGAACCAAATGAACTATTAACTACAATCGAAATGTCCGAGGTGGACACGCAGTCCTGTCTTCAAGCTCACGATGCTTCGTTGGCGAACTACTTAACCGATAAGGTTTACTGCGCGAAATATGTCAATGGCACTAGTAACTGCCACAAAGACAGCGGGGGCGGCATGATGGTCCGAGTGAAGAACAAATGGTACCTGCGCGGCGTGCTCTCGTTCTACTACTCGCCCGAGCTGCAGCACGCCTGTCAGAGTCACGCCCTGTTCACGGACGTCGCCAAGCACCTGCCCTGGATCAAACAGCACGTCTACGACTTCTTGTGA
Protein
MAFINIISINSCIPSLLLILLVSAQTKPQPALVSPCPSVFEYDTSIQHPGRWYGVIKLSSDYTIHSLWLNIHLDDNYSEAFKNCLGSVTQENKYEFMINRTDFVINPGEVKKVQIYVEYNITSSPPKMIGIAFNGRRICGPSFVLSLLHSDYRYHGTDMRGCPYRPSALPPSSEEETSSNPTYNIQSTTDSGVVSNPTNKTENKDVDDLFGGPVSFALPDTVNNFHNKSERSRCGRIYAKSPLVIGEAIETIHWPWQVLILRSISAHTYHMTDFKYRCSGTLVSTRHVITAAHCLTVRGQLIERDFEFIDAGRHQLRVNEDRIFGVIKDIKIHPEFDYQTFRNDLSIVEAAYRIKYSTWVQPACLWPQTPVPEKHRAKTGVVGGWGFDQSGEPNELLTTIEMSEVDTQSCLQAHDASLANYLTDKVYCAKYVNGTSNCHKDSGGGMMVRVKNKWYLRGVLSFYYSPELQHACQSHALFTDVAKHLPWIKQHVYDFL

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF16030   GD_N        + More
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR031986   GD_N       
IPR018114   TRYPSIN_HIS       
SUPFAM
SSF50494   SSF50494       
PDB
3F6U     E-value=5.20088e-18,     Score=224

Ontologies

Topology

SignalP
Position:   1 - 26,         Likelihood:  0.949935
 
 
Length:
496
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
10.15615
Exp number, first 60 AAs:
10.1503
Total prob of N-in:
0.47217
POSSIBLE N-term signal
sequence
outside
1  -  496
 
 

Population Genetic Test Statistics

Pi
394.995618
Theta
194.446205
Tajima's D
2.774303
CLR
0.371926
CSRT
0.965801709914504
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号