SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09508
Pre Gene Modal
BGIBMGA014571
Annotation
PREDICTED:_serine_protease_gd-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.687 PlasmaMembrane   Reliability : 1.25
 

Sequence

CDS
ATGGCTTTTATAAATATTATATCAATTAATAGTTGTATCCCTTCACTGCTGCTCATACTGCTGGTGTCAGCTCAAACGAAGACGCAGCCCGCGCTGGTGTCTCCGTGCCCTAGTGTCTTCGAATACGACACAAGCATACAGCATCCGGGTAGATGGTACGGCGTTATCAAGCTATCAAGCGACTACACTATCCACTCGTTGTGGTTGAACATACATCTGGACAACTATTCTGAGGCGCTTAAGAACTGTCTAGGGAGCGTGACGCAGGAGAACAAATACAAATTTATGATCAACAGAACGGATTTCGTAATCCACCCCGGCGAAGTGAAGAAAGTACAGATTTATGTCGAATATAACATTACGAGCTCTCCTCCTAAAATGATAGGTATAGTATTTAATGGTCGCAGAATATGCGGGCCGTCATTCGTTCTGTCCCTATTACATTCAGACTATCGTTATCACGGGACCGATATGCGGGGATGTCCTTATCGACCAAGCGCTCTGCCTTCCTCGGAGGAGGAAGCTTCCAGTAACCGAACATACAATATACAAAGCACTACCGACAGCGGCGTAGTTCCTAATCCAACAAACAAGACTGAAAACAAGGACGTTGACGATCTATTCGGCGGGCCAGTATCCTTTGTATTGCCGGATACAGTTAATAACTTTCACAACAAGAGCGAACGCAGCCGTTGTGGTAGAATATACGCAAAATCACCTTTGGTCATTGGAGAAGCGATCGAGACCATACATTGGCCTTGGCAGGTGTTAATATTAAGGTCGATAAGCGCTCATACATATCATATGACGGACTTCAAGTATCGGTGTAGCGGCACTCTGGTTTCGACGCGGCACGTGATCACGGCTGCTCATTGTCTCACGGCCCGGGGTCAGCTCATCGAAAGAGACCTCCAATTAATTGTTGCAGGGCGGCACCATTTGCACGTTCAATTAGTTAACGAAAAGCACATATTTGCTGAAATCAAAGATATAAAAATTCACCCGGAGTTCGACTACCAAACATTCAGAAACGACCTGAGCATTGTGGAGGCTGTGGATCGAATAAAATACTCTAGCTGGGTGCAGCCGGCGTGTCTCTGGCCGCAGACTCCGGTACCCGAGAAGCACCGCGCGAAAACTGGAGTGGTGGGGGGCTGGGGTTTCGATAAGTCAGGAGAACCAAATGAACTATTAACTACAATCGAAATGTCCGAGGTGGGCACGCAGTCCTGTCTTCAAGCTCACGATGCTTCGTTGGCGAACTACTTAACCGATAAGGTTTACTGCGCGAAATATGTCAATGGCACTAGTAACTGCCACAACGACAGCGGGGGCGGCATGATGGTCCGAGTGAAGAACAAATGGTACCTGCGCGGCGTGCTCTCGTTCTACTACTCGCCCGAGCTGCAGCACGCCTGTCAGAGTCACGCCCTATTCACGGACGTCGCCAAGCACTTGCCCTGGATCAAACAGCACGTCTACGACTTCTTGTGA
Protein
MAFINIISINSCIPSLLLILLVSAQTKTQPALVSPCPSVFEYDTSIQHPGRWYGVIKLSSDYTIHSLWLNIHLDNYSEALKNCLGSVTQENKYKFMINRTDFVIHPGEVKKVQIYVEYNITSSPPKMIGIVFNGRRICGPSFVLSLLHSDYRYHGTDMRGCPYRPSALPSSEEEASSNRTYNIQSTTDSGVVPNPTNKTENKDVDDLFGGPVSFVLPDTVNNFHNKSERSRCGRIYAKSPLVIGEAIETIHWPWQVLILRSISAHTYHMTDFKYRCSGTLVSTRHVITAAHCLTARGQLIERDLQLIVAGRHHLHVQLVNEKHIFAEIKDIKIHPEFDYQTFRNDLSIVEAVDRIKYSSWVQPACLWPQTPVPEKHRAKTGVVGGWGFDKSGEPNELLTTIEMSEVGTQSCLQAHDASLANYLTDKVYCAKYVNGTSNCHNDSGGGMMVRVKNKWYLRGVLSFYYSPELQHACQSHALFTDVAKHLPWIKQHVYDFL

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF16030   GD_N        + More
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR031986   GD_N       
IPR018114   TRYPSIN_HIS       
SUPFAM
SSF50494   SSF50494       
PDB
4IW4     E-value=9.99655e-18,     Score=222

Ontologies

Topology

SignalP
Position:   1 - 28,         Likelihood:  0.952253
 
 
Length:
497
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.85603999999999
Exp number, first 60 AAs:
9.84699
Total prob of N-in:
0.45663
outside
1  -  497
 
 

Population Genetic Test Statistics

Pi
186.203286
Theta
162.219741
Tajima's D
0.339859
CLR
1.601268
CSRT
0.464076796160192
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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