SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09506  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013050
Annotation
PREDICTED:_serine_proteinase_stubble-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 2.345
 

Sequence

CDS
ATGATTTATTTTAAAGCGATCTTCGGTGTGGTTTCTCTGGTTTTGGCTGTGGCGACGCAAGCTGTACAAGCAGCATTGACGTCTCCGTGTCCTGAGTATTTCACTTACGAGATATCCCCATCGACACCAGATCGGTGGCATGGCGTATTAGTGCTGCCTCCTGAAATCGTTGAAGACTACTTATGGATTTACGTCGCATTGAATCGCAAAGCTGATGTGTTTGCCAGCAACAAAGGATCTACCTCGACCGAAAACTTTCAAGAATTCTTATTCCAGAAAAGAGATTATTTCAATTTTGATAGTGCAAAGAGTGAAGAAACTATAAGGTTTGTTACATCTTACGATTATGCCCATCCGATACCGCGTGTTAAGATTATAAGAGTCAATGGACGCGAAATATGCAGAGACGATAATACGACACAAGTCGGAAACAAAATAAGCTTTCCGACGCGCCCAGAGCTTCCGAATATGCTGCTTATATCAAAATTGAATGCAACCGGCTATACACCGGAGTTTTTGACAATTTTCCAAAACTCAACCTCTGGAGTTGCGCGATAA
Protein
MIYFKAIFGVVSLVLAVATQAVQAALTSPCPEYFTYEISPSTPDRWHGVLVLPPEIVEDYLWIYVALNRKADVFASNKGSTSTENFQEFLFQKRDYFNFDSAKSEETIRFVTSYDYAHPIPRVKIIRVNGREICRDDNTTQVGNKISFPTRPELPNMLLISKLNATGYTPEFLTIFQNSTSGVAR

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF16030   GD_N        + More
PF00089   Trypsin
Interpro
IPR031986   GD_N        + More
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR018114   TRYPSIN_HIS       
IPR001254   Trypsin_dom       
SUPFAM
SSF50494   SSF50494       

Ontologies

Topology

SignalP
Position:   1 - 24,         Likelihood:  0.991917
 
 
Length:
185
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.67989
Exp number, first 60 AAs:
14.19947
Total prob of N-in:
0.65714
POSSIBLE N-term signal
sequence
outside
1  -  185
 
 

Population Genetic Test Statistics

Pi
147.676015
Theta
127.192711
Tajima's D
0.952446
CLR
0.076671
CSRT
0.650017499125044
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
29197581 DYFNFDSAK 100.00 1e-04
28467696 FVTQYIEINPVDVEK 100.00 0.003
29197581 EICRDDNTTQVGNK 100.00 0.003
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号