Silkworm Genome Informatics Database

Gene

KWMTBOMO09502 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013053

Annotation

PREDICTED:_uncharacterized_protein_LOC106129971_[Amyelois_transitella]

Location

Bomo_Chr16(-):2638478-2662937 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.957

CDS

ATGAGTGTCATCATAAGACTACAGAACCTGCCTTGGTCGGCAAACGCTCTGGATATTAGGAATTTCTTTCGGGGCCTTTCGATACCCGAGGGGGGTGTACACATCGTAGGAGGCGAGCTGGGAGATGCTTTCATTGCTTTCAGTACCGATGAAGATGCGCGTCAAGCCATGATGCTCGATGGTGGAAAAATCAAAGAAATCCAAGTGAAACTTTTACTTAGTTCCCGTTCGGAAATGCACAAAGTCATAGAGACCGCTCGTCAGAATGTTCCTCTCCTCAGTCTTGCGACTGCAGCACCTACTGTTTCCGCGGTAGCCCCGATCAACGTCCCACAAAACAATTTAGCTGCTTCCTCTTTGACTGTTCACTCGAGTTCGATACTACCCACCGTGACACCATTCTCAGCAGCCCTCGGCACTAATTCGCTCACCAATTTCGGGATTCCGGGTCTAGGAAATCCTCAAGAAATTCCTCAACCTGCCGTCATTGAGCCTCCGCCGCCCCTCATCAGTCCGAGCAATAATAAAGACGATCAATTCGATGATGAAAGAGAGGAAGAAAAAACCGATAGAAAACGCAGCCGCGAAAAAGACAAACGCAGATCCCGGTCGCGTTCCAGATCCCGCGATCGGAAGGAAAGGAAGCGGGATCGTCGGGACCGTTCTCGCTCGAGGGAACGCCGGCGCCGTGACCGAAGTCGCAGTCGGGAACGAAGAGGGCGCAAGCGAGATAGGAAGGATCGGAGCCGCTCCAGAGACCGGTCCTCGTCTCGTCGATCACGGGACCGCCGCAACGACAGACGGTCTCCAGGCAATGCTCAAGAGAAGATGTCAGACTATACCCCGTCGGGAGATTCAACGATGCCGCCAGTACTGCCTGGCTTAAAAAATAATATAAACGCTCCCGTAACTCAGGGGACGACGCAAACAGTGCAAAACGGACCGCTAAGTTCCGGTAACGAATCCATTCAAACACATCGATTCACTGATCCCGATATTATGGACGCTTATAACAAGCTTCAGGAACTTGGCAAGAAGCGGAACCCGAACGCGTTCCAAGGTGATCAGGCCAACGGAGGGGGGAAAATGAGTGCGGGACGCGGGGGGAGCACGCGCGGTGGCTACAGGCGAGACGGTCGCGTTTCACGAAACGCGCCCAACCACACCAGCTACGGCGACGTCCGGCGTTTCTTCCCTTTCATGATCGACAAGCATGGCATCAAAATGATCAACGACAACACGGGTCGTCGGACCGGTACAATTTACGTACGCTTTTGCGACGCGCGCTCCAAGCTCCTCGCGTTACAACGTAAAAACAATGAGCTGAAGGGGGTCGAGGTGATCGTTGAGGATTTGGATGACGAGACTTACGAAACCGCCGTCGACTCGTTCCTGCCGTACCGAGACGACAACGACGATGAAGAACAGAGTCTCGCTACTACAGAAACGGCCGGAGATGTCTCTCAGCCGCCATTCAACGTCCTCAAACTTTCGGACTTGCCTAATTTCGTAAAAGAGCACGACATAATGAAGGTCTTTGGGGACTTCTCGCTCACGTCGATAATCATCAACGACTGCCGCGTTTCTCGCACAAAAATCGCCTACGTTCAATTCGCAAAGAACGAGGATGCGAGACTCGCTCTAGAGCGGAAAGAAAAGTGCATTTTCGGTAGACGGCAAGCAACCTGCGTTTCGGTGTCCACTGAGGAATTCGAAAAGGTAAAATCACAAAATGAAAAAATGTCCAATGTACAGGTTAACACAGAGAATAATGCGGAAGAGACAGCCCCCGCGCCCCGCGATCCCCGCCAGCGCCGCGCCGACTTGCCCCCCGCCGTCCAGCCTGCACCGTTCTTCGCACCACCCTTTGTTCCCCCGCAGTCGTTCCCGCCGGTGGCTTTCGGATCACCGCAGTTCAGCGGATTCCCTGGGGGCTCTGTAGATCCTCGCACGGCCGCCAAGAACTGGGCACAACGACCCCAGTTCCAGCCTCGAGCAGAAACGTCGATCCCGGCACCCAAAGTTGCCATCTCGACGGAAATGGACGACGCGCCACTCGACTGCGTACTTATGAAGGGTCTCCCCCGCGGCGCCACAGATCGCACCATCGTCACGTTCCTGGCGGACACCGGAGCCGTCCCGGCGAGGATACATCTCATGCTCGACACCAACGGACTGCCTTCCGGAGACTGCTTCTGCGAATTCCGCTCGGCACAAGAAGCTAGGATGGCGGCGGCAAAACATGGAAAGGACCTCGAAGGCTGCCGCATCACGGTAGACCTCGTCCCGCGAAGTGTCGTCGAAGAGGCATTAGAAGGACCTAAGCAGCCGGAGCCCTCGTTGCTCGGAAACGGTCCGCCGCCTCCGTTCTTCGCACAGATGCGCGGAGGATTTCCACCACGCGGACCTTTTCGGGGAACCCGAGGGTTCGAACGCGGAGGCTTCGACCGAGGAGGGTTCGGTCACCGCGGTGGCTTCGATCAGTCAATGAACAGCTTCGATCAGAGTCGCGGCGGGTTCAGAGGCCGCGGCGGCTTCCAGGAGCGCGGACGGGGATTTGACAGAGGGCGGGGTCGCGGATTCGGTCGCGGTGGGAGCGGCGGCTTCGAGAACGGACGCGAAGACGACCAGGACCCGGCGCTGCAAGATTTCGGCGCGCCGGGCTGCGTCGTCTCCATGGAGAATGTGCCGTTCCGCGCGACCATCGACGAGATCCTGCAGTTCTTCTCGGAGTTCGAGTTGTCGCACGACGACGTGATAAGGCGGTACAACGAGCGCGGGCAGCCGACGGGCGACGCGCGTGTCGCCTTCCGGACGCCCTTCGACGCGACGCGCGCCGTCAAGACGCACCACCTCGACACGATCCACGAGCGCCGGATCACCCTCAACATCCTCTAG

Protein

MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAFSTDEDARQAMMLDGGKIKEIQVKLLLSSRSEMHKVIETARQNVPLLSLATAAPTVSAVAPINVPQNNLAASSLTVHSSSILPTVTPFSAALGTNSLTNFGIPGLGNPQEIPQPAVIEPPPPLISPSNNKDDQFDDEREEEKTDRKRSREKDKRRSRSRSRSRDRKERKRDRRDRSRSRERRRRDRSRSRERRGRKRDRKDRSRSRDRSSSRRSRDRRNDRRSPGNAQEKMSDYTPSGDSTMPPVLPGLKNNINAPVTQGTTQTVQNGPLSSGNESIQTHRFTDPDIMDAYNKLQELGKKRNPNAFQGDQANGGGKMSAGRGGSTRGGYRRDGRVSRNAPNHTSYGDVRRFFPFMIDKHGIKMINDNTGRRTGTIYVRFCDARSKLLALQRKNNELKGVEVIVEDLDDETYETAVDSFLPYRDDNDDEEQSLATTETAGDVSQPPFNVLKLSDLPNFVKEHDIMKVFGDFSLTSIIINDCRVSRTKIAYVQFAKNEDARLALERKEKCIFGRRQATCVSVSTEEFEKVKSQNEKMSNVQVNTENNAEETAPAPRDPRQRRADLPPAVQPAPFFAPPFVPPQSFPPVAFGSPQFSGFPGGSVDPRTAAKNWAQRPQFQPRAETSIPAPKVAISTEMDDAPLDCVLMKGLPRGATDRTIVTFLADTGAVPARIHLMLDTNGLPSGDCFCEFRSAQEARMAAAKHGKDLEGCRITVDLVPRSVVEEALEGPKQPEPSLLGNGPPPPFFAQMRGGFPPRGPFRGTRGFERGGFDRGGFGHRGGFDQSMNSFDQSRGGFRGRGGFQERGRGFDRGRGRGFGRGGSGGFENGREDDQDPALQDFGAPGCVVSMENVPFRATIDEILQFFSEFELSHDDVIRRYNERGQPTGDARVAFRTPFDATRAVKTHHLDTIHERRITLNIL

Uniprot

H9JU41

Pubmed

19121390

EMBL

BABH01004024

Proteomes

UP000005204

PRIDE

H9JU41

Pfam

PF00076 RRM_1

Interpro

IPR035979   RBD_domain_sf        + More
IPR012677   Nucleotide-bd_a/b_plait_sf
IPR000504   RRM_dom

SUPFAM

SSF54928 SSF54928

Gene 3D

3.30.70.330

ProteinModelPortal

H9JU41

PDB

2EK6 E-value=4.81962e-08, Score=141

KEGG

101746806 no KO assigned | (RefSeq) uncharacterized LOC101746806

GO

GO:0003676 GO:0000166 GO:0003677 GO:0019898 GO:0005856 GO:0006108 GO:0030060 GO:0016615 GO:0000049 GO:0016876

Length:

965

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1202

Exp number, first 60 AAs:

0.01352

Total prob of N-in:

0.00559

outside

1 - 965

Pi

177.590014

Theta

154.705527

Tajima's D

-1.068531

CLR

2.87567

CSRT

0.128193590320484

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics