Gene
KWMTBOMO09497
Pre Gene Modal
BGIBMGA013055
Annotation
putative_Ataxin-7-like_protein_1_[Danaus_plexippus]
Location in the cell
Nuclear Reliability : 3.509
Sequence
CDS
ATGTCTGGTGACTACCCTTTCGCGACCAAACTAGTGAGTCCCGTGAAGTGCAACGAGAAACCATGGGACTTGTGGGTGAGCGAAATAGGACACCTGTCCCCTCGACGGGACGACGACGCCGCGCCAGGCTCAGACGTGAAAAGCTCGGCGTCGATGAGGCGCTCGAACGACCACCATCCCTACAAAGCGGCCGATCGTACGCGCCAACGTCGTCCGGGCCTTAACCGTCTCAAGCAAGACACCATGAACTTGCACGGTCTCTTTCCACAAATGGACAATCTCAATGCTGCTGTGTGTCACATGTGCGGAGTGATAGTGAAGTGTAGTGCAGCGTATAGACATCTTCTCGATTCCCACACAGGCAACGAACCTCTCCTGCCCCCGCCGCCACCTGCCCCTACAGTCAGAAGTAGAAGTAGGCATAAAAAAGAGCCTCCACCCCCACCACCACCTGTTCCTATAGACGTACGTCAGATAAAAATGGATACATCCCCAGTACATTCAGCCACACCTCCGTTATCAAGAATAGTAATGCCACCCCCCGAGGCTCCACCATATATGGAGGAACCAAACAATCCTGCAGTCACAGGAGAAGTGCAAGTGTGCGTAGAAGGTGGAGAATTACCTGTTGTCAGTATACAGGATACTGACGATTTGCCATTAGGAGAAAATATAACGGATGATATTTTTGAAATAATGAACTCTGAAGGTATACAGAGTGCGGACGATATCACAAATTCAACAGACTGGAAGAATATAATTAGAGATATAGGAAACATGCATGATATAAATTTTCCACAGGCGTCTGACCCTATCTCATCACAAGAAATGTACCCGCCAATGCACACAGCTTCGTTACCTGCATATGCCCTAACGGATGCAGATTTGTCTAATTTGCATTTCCCTTCTAACACGTCGCCCATGCTGACTTCGGTTGTTGAAACGAGTACGATGCCAGTCCTGACCCCTCCCGTTCCCCCGCCGGCGCCTTCCCCTGCGAAGTCGACTCCCAGCACACCATCATCCAGATCGGGCGGCCGGAAAACTAGCAAGACGAAATTCAGCTTACGCGAGTACGATCCGAACAAACACTGTGGAGTCCTAATGGTTGAAACCCTTAAACCATGTACGAGGTCACTAACGTGTAAAGCACACGCGCTTTCACTTCGGAGGACGGTGGAGGGGCGAGCGAAACCCTTCGACACGCTGTTGGCGGAGCACCGAGCGTCTCGGGAGGCGGGGGCGGCGGCCGCTGCGGCTCCTCCGCCCCCCGCGCCGCCCCCTGTCGCCGCCGCCCCGCTGAATATCCCACCGCTACTAGTCAACAACACTTCACACATAGACCTGAGCGCCTTCAACGGCTTGACCGCGGAGCAACAAGTCAATGATATTTACGCAAGTCTACTCGGCGTCGAGGAGGGCGAAGCGGTGCTGCCGGACACGTCCAGTTTCACGTCGCTACTGAGCCAGCAGTTGCCGGAGCCGTTTCTGTTGCCTGAAGCCGAGCTGCAAGAGGAAGTGCCCGTCCTGAACACGGTGCAGGCCGACGAACCACCGCCGGCCGTGGTGCCGACCGACGTCTGCTGGTACTCCTCGACTCCTCGACCGCTCGCGCTGTGCACGTTCAACGCGTCGCACGCCGGTGGCGCCATCACCTTAGGCAAAAAATTCGCCACCGTCCGGAGCAACATCAAGTCGTCCCTGACGCGGTCGCAGTGCAAAACCGGCGCGGCGAACAATTATTATTACGGGTCGAACTCTCTGTCTCTCTCTAAGACTGTGCACATAAACGCTGGTAAAAGCACGAAGCCGGAGGTGCGTAAGTTAATAGTGACGTGCGGGAGTGGGGGGGGGAAGGACAAGGTGCAACAGACCCTGAGCGAGTTGTTCGGCGGACACGCGCTGAACGGACACGTGGGGAAGCGAGCCCCGCTCAAGCACAAGCGTCCCGGCGCGGTGCTGGACCTCGGCTTCTCGCTCGACGCGGCTCTTCTCGCCGACGAGAAGTGCTGA
Protein
MSGDYPFATKLVSPVKCNEKPWDLWVSEIGHLSPRRDDDAAPGSDVKSSASMRRSNDHHPYKAADRTRQRRPGLNRLKQDTMNLHGLFPQMDNLNAAVCHMCGVIVKCSAAYRHLLDSHTGNEPLLPPPPPAPTVRSRSRHKKEPPPPPPPVPIDVRQIKMDTSPVHSATPPLSRIVMPPPEAPPYMEEPNNPAVTGEVQVCVEGGELPVVSIQDTDDLPLGENITDDIFEIMNSEGIQSADDITNSTDWKNIIRDIGNMHDINFPQASDPISSQEMYPPMHTASLPAYALTDADLSNLHFPSNTSPMLTSVVETSTMPVLTPPVPPPAPSPAKSTPSTPSSRSGGRKTSKTKFSLREYDPNKHCGVLMVETLKPCTRSLTCKAHALSLRRTVEGRAKPFDTLLAEHRASREAGAAAAAAPPPPAPPPVAAAPLNIPPLLVNNTSHIDLSAFNGLTAEQQVNDIYASLLGVEEGEAVLPDTSSFTSLLSQQLPEPFLLPEAELQEEVPVLNTVQADEPPPAVVPTDVCWYSSTPRPLALCTFNASHAGGAITLGKKFATVRSNIKSSLTRSQCKTGAANNYYYGSNSLSLSKTVHINAGKSTKPEVRKLIVTCGSGGGKDKVQQTLSELFGGHALNGHVGKRAPLKHKRPGAVLDLGFSLDAALLADEKC
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF08313 SCA7
Interpro
IPR013243
SCA7_dom
ProteinModelPortal
PDB
2KKR
E-value=1.61279e-14,
Score=195
Ontologies
GO
Topology
Length:
670
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00725999999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00045
outside
1 - 670
Population Genetic Test Statistics
Pi
35.349129
Theta
236.844777
Tajima's D
-1.774366
CLR
1180.424351
CSRT
0.0301984900754962
Interpretation
Possibly Positive selection
