Gene

KWMTBOMO09494

Pre Gene Modal

BGIBMGA014502

Annotation

PREDICTED:_merlin?_partial_[Bombyx_mori]

Location

Bomo_Chr16(-):2502061-2523587      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.445

CDS

ATGCCGCCCTTCCGGAGGAAGAAAGCTGCTAAATCTTTTCCAGTTAAAGTATGCACATTGGATGCTGAATTGGAGTTCAACCTCGAGTGGCGAGCTACGGGTCGTGATTTGTTCGACCTGGTGTGCAGGACAATTGGCCTACGTGAAACATGGTTCTTCGGTCTCCAATTCGAAGACACAAAACATTTTATAAGCTGGCTGAAGTTGGACAAGAGAGTACAAGACCAATGCGTCTCCCAAATGCCAGGTACTCCCTTCATGTTACTCTGCAAGTTGTATCCCGAGGACGTGGCCGAAGAACTGATCCAAGAGGTCACACAGCACCTGCTGTTCCTCCAGGTGAAGCAGGCGATATTAAGCATGGACATCTACTGTCCCCCCGAGGCTTCCGTCCTACTGGCCAGTTACGCTGTACAAGCTAAATATGGCGACTATGACGAGAGCGCCTACAAGCCCGGTATGCTGGCCAGCGAGGATCTGCTCCCTCAACGGGTCATAGATCAGTACCAGATGACGCCGGAGATGTGGGAGGACAGGATCAAGATTTGGTACGCAGACCACAAAGGGATGTCGCGTGACGAAGCCGAAATGGAATATCTGAAGATAGCACAGGACTTAGACATGTACGGCGTTAACTATTTCGCCATCAAAAACAAAAAAGACACGGAACTGTATCTTGGCGTGACAGCCCTTGGACTGAACATATACGAGAAGGACAATAAGCTCACCCCAAAGACCACCTTCCCGTGGTCCGAAATAAAGCACATATCGTTCGACGATAAAAAGTTCATTATAAAGTTCGTCGACAGAAGCGTCACGAACTTCATATTCTTCTCGCCGAAGGGAATGAACAAGTTGATACTGGATCTGTGTATCGGGAATCACGATCTGTATATGAGAAGGCGGAAGCCGGACACCATGGAGGTCCAGCAGATGAAAGCGCAGGCCAAAGAGGAGAAACAGCGTCGGCAAATAGAACGCAACAAGCTGTCCCGGGAGAAGCAGCTCCGGGAGGTGGCGGAGCGGGAGCGCGCGGCCATGGAGCAGCGGCTGCTGCAGTACCAGGAGGAGATACGGCTCGCCAACGAGGCGCTCCGCCGGTCCGAGGAGACGGCAGAACTATTAGCTGAGAAAGGTAGAGTAGCAGAGGAAGAAGCGTCTCTACTCGCGCAGAAGGCGGCGGACGCTGAACGAGAGAACGCTAGACTTAGGCTGTCTGCCATCAAGACTGAAGAGGAAAAGGTACACTTGGAACGCAAGACCCGCGAGGCGGAGTACCTGACGGCGCGGCTGGTCGAGGAGTCGGAGAAAAGGGCCGCCGAAGCCGAGAGACTGAAGGCGGAACTGCTGACCGCCAGAGTGGCGGAGAAACAAGCCAAAGAGAAACTCCTCAACTTCCTCAGCAGGACGTCGACCGGATCCTTGCCGCAGCAATTTCCGGCGTCGCCGACGGTCCCGTGCAGCCTGTTCCCGTCCACGTGCTCGCTGCCCGCCGAGCTGGGGGGCGAAGGCCTGCAGAACGGCGCGGCCGGCGCCCCGGAGCCCGAGCTCAACTCCTACCAGCTCGTGCCCGACGATTCCGACCCGCACATACACAGGCTCTCGCTGGAAATCGAAAAGGAGAGGGTGGAGTACCTGGCCAAGTCGAAGCACCTCCAAGCCCAGCTGGAGTCCCTGCGCGGGGAGTTCAGCGTGCTGCGGGGCGAGGGGCGCGGGGAGGGGCGCGGCACGCTGGACCGGCAGCACGCCGCGCGCCCCGACGACAAGTACTCCACGCTGCGCCGCCTGCGGCAGGGCTCCACGGGGCAGCGCCTCGCCTTCTACGAGGATCTGTGA

Protein

MPPFRRKKAAKSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLDKRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPEASVLLASYAVQAKYGDYDESAYKPGMLASEDLLPQRVIDQYQMTPEMWEDRIKIWYADHKGMSRDEAEMEYLKIAQDLDMYGVNYFAIKNKKDTELYLGVTALGLNIYEKDNKLTPKTTFPWSEIKHISFDDKKFIIKFVDRSVTNFIFFSPKGMNKLILDLCIGNHDLYMRRRKPDTMEVQQMKAQAKEEKQRRQIERNKLSREKQLREVAERERAAMEQRLLQYQEEIRLANEALRRSEETAELLAEKGRVAEEEASLLAQKAADAERENARLRLSAIKTEEEKVHLERKTREAEYLTARLVEESEKRAAEAERLKAELLTARVAEKQAKEKLLNFLSRTSTGSLPQQFPASPTVPCSLFPSTCSLPAELGGEGLQNGAAGAPEPELNSYQLVPDDSDPHIHRLSLEIEKERVEYLAKSKHLQAQLESLRGEFSVLRGEGRGEGRGTLDRQHAARPDDKYSTLRRLRQGSTGQRLAFYEDL

Uniprot

A0A2A4J1U1   H9JY82   A0A2W1B4B9   A0A0N1I6Z3   A0A194Q0F8   A0A212FMW2   + More
A0A2H1VN51   A0A3S2NEM7   A0A2J7R8A4   A0A0C9QAX7   A0A087ZNW8   A0A154PAE3   A0A067R5E3   A0A026WLF8   E2AHF4   A0A1B6HVE3   F4W6W2   A0A158NAN3   A0A1B6F247   A0A2P8Y1H3   A0A195DQP9   A0A2R7VZ87   K7IVX0   T1IGJ3   M5AK70   A0A151I5J0   A0A151WU91   A0A146LGD3   A0A195CJH1   A0A0A9XV66   A0A0K8SAR6   A0A195EVJ8   J9JWV8   E2BV71   A0A2S2PY51   U4ULV6   N6TVQ5   D2A4B9   A0A0T6B950   E0VMZ3   A0A182JP42   A0A182XAA3   A0A182QM64   A0A1Y9H8E9   A0A1I8JVJ9   A0A1S4H4J1   Q7PRJ8   A0A240PKM8   A0A182PBU8   A0A182HX07   A0A182UHK8   A0A1I8JVG5   A0A1I8JSZ6   A0A084VDA8   A0A1Y9IY62   A0A1Y9H1I7   A0A182NQ21   A0A182MQQ0   A0A182R919   A0A1Y9ITM8   A0A2C9GUG7   A0A1Y9HAA5   A0A182W867   A0A182YE24   A0A131Z393   A0A224YT64   A0A2H8TZT2   L7M2F9   A0A131XAI1   A0A1E1XIQ9   A0A226E532   A0A2M3Z8P5   A0A2M4AN91   W5JLF7   A0A182FBX4   A0A2R5LLR7   A0A2P6K5V3   A0A131XVU4   A0A1Z5L2Q4   A0A293N5D1   A0A1Y1LKC2   A0A1D2N746   E9GW23   A0A0P5AIW7   A0A182GCR3   A0A0P6G4B4   A0A0P5LCW5   Q177U9   A0A0P5N2V9   A0A1Q3F8F4   A0A0P5N1U0   A0A1S4FC74   A0A0P5V924   B0WM39   A0A0P6G6X0   A0A087U927   A0A0P4YQI1   A0A0P5V266   A0A0P4Y2I8   A0A0P4XRV5  

Pubmed

19121390    28756777    26354079    22118469    24845553    24508170    + More
20798317    21719571    21347285    29403074    20075255    26823975    25401762    23537049    18362917    19820115    20566863    12364791    24438588    25244985    26830274    28797301    25576852    28049606    28503490    20920257    23761445    28528879    28004739    27289101    21292972    26483478    17510324   

EMBL

NWSH01003665    PCG65961.1    BABH01042522    BABH01042523    KZ150346    PZC71282.1    + More
KQ460651    KPJ13018.1    KQ459582    KPI99062.1    AGBW02007651    OWR55063.1    ODYU01003443    SOQ42227.1    RSAL01000071    RVE49137.1    NEVH01006723    PNF37066.1    GBYB01011637    GBYB01011638    GBYB01014783    JAG81404.1    JAG81405.1    JAG84550.1    KQ434857    KZC08813.1    KK852685    KDR18499.1    KK107182    EZA55934.1    GL439525    EFN67134.1    GECU01029065    JAS78641.1    GL887762    EGI70075.1    ADTU01010397    ADTU01010398    GECZ01025598    JAS44171.1    PYGN01001050    PSN38096.1    KQ980612    KYN15171.1    KK854178    PTY12659.1    ACPB03001109    AB663106    BAN09208.1    KQ976413    KYM90348.1    KQ982740    KYQ51406.1    GDHC01012194    JAQ06435.1    KQ977642    KYN00886.1    GBHO01018927    JAG24677.1    GBRD01015577    JAG50249.1    KQ981954    KYN32285.1    ABLF02024009    GL450824    EFN80363.1    GGMS01000649    MBY69852.1    KB632404    ERL95059.1    APGK01052851    KB741216    ENN72476.1    KQ971348    EFA04811.1    LJIG01009040    KRT83875.1    DS235331    EEB14749.1    AXCN02002277    AAAB01008849    EAA07087.4    APCN01005111    ATLV01011197    KE524651    KFB35952.1    AXCM01002647    GEDV01003631    JAP84926.1    GFPF01009662    MAA20808.1    GFXV01006853    MBW18658.1    GACK01006809    JAA58225.1    GEFH01004488    JAP64093.1    GFAC01000070    JAT99118.1    LNIX01000006    OXA52825.1    GGFM01004158    MBW24909.1    GGFK01008906    MBW42227.1    ADMH02001220    ETN63609.1    GGLE01006305    MBY10431.1    MWRG01024783    PRD21706.1    GEFM01004382    JAP71414.1    GFJQ02005502    JAW01468.1    GFWV01022872    MAA47599.1    GEZM01054870    JAV73361.1    LJIJ01000172    ODN01088.1    GL732569    EFX76345.1    GDIP01198182    JAJ25220.1    JXUM01056329    JXUM01056330    KQ561906    KXJ77209.1    GDIQ01057246    JAN37491.1    GDIQ01173353    JAK78372.1    CH477371    EAT42420.1    GDIQ01155568    JAK96157.1    GFDL01011252    JAV23793.1    GDIQ01193548    GDIQ01148228    GDIP01140786    GDIQ01083487    LRGB01003325    JAL03498.1    JAL62928.1    KZS03264.1    GDIP01103221    JAM00494.1    DS231994    EDS30867.1    GDIQ01039160    JAN55577.1    KK118799    KFM73866.1    GDIP01224276    JAI99125.1    GDIP01105928    JAL97786.1    GDIP01235676    JAI87725.1    GDIP01237429    JAI85972.1   

Proteomes

UP000218220    UP000005204    UP000053240    UP000053268    UP000007151    UP000283053    + More
UP000235965    UP000005203    UP000076502    UP000027135    UP000053097    UP000000311    UP000007755    UP000005205    UP000245037    UP000078492    UP000002358    UP000015103    UP000078540    UP000075809    UP000078542    UP000078541    UP000007819    UP000008237    UP000030742    UP000019118    UP000007266    UP000009046    UP000075881    UP000076407    UP000075886    UP000075903    UP000007062    UP000075885    UP000075840    UP000075902    UP000030765    UP000075884    UP000075883    UP000075900    UP000075920    UP000076408    UP000198287    UP000000673    UP000069272    UP000094527    UP000000305    UP000069940    UP000249989    UP000008820    UP000076858    UP000002320    UP000054359   

PRIDE

H9JY82    L7M2F9   

Pfam

PF00373   FERM_M        + More
PF09379   FERM_N
PF09380   FERM_C
PF00769   ERM

Interpro

IPR018979   FERM_N        + More
IPR041789   ERM_FERM_C       
IPR019747   FERM_CS       
IPR019748   FERM_central       
IPR000798   Ez/rad/moesin-like       
IPR011993   PH-like_dom_sf       
IPR018980   FERM_PH-like_C       
IPR000299   FERM_domain       
IPR029071   Ubiquitin-like_domsf       
IPR008954   Moesin_tail_sf       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR019749   Band_41_domain       
IPR011259   ERM_C_dom       
IPR035963   FERM_2       
IPR011174   ERM       

SUPFAM

SSF48678   SSF48678        + More
SSF54236   SSF54236       
SSF47031   SSF47031       

Gene 3D

1.20.80.10     1.25.40.1020     2.30.29.30    

CDD

cd14473  FERM_B-lobe
cd13194  FERM_C_ERM

ProteinModelPortal

A0A2A4J1U1   H9JY82   A0A2W1B4B9   A0A0N1I6Z3   A0A194Q0F8   A0A212FMW2   + More
A0A2H1VN51   A0A3S2NEM7   A0A2J7R8A4   A0A0C9QAX7   A0A087ZNW8   A0A154PAE3   A0A067R5E3   A0A026WLF8   E2AHF4   A0A1B6HVE3   F4W6W2   A0A158NAN3   A0A1B6F247   A0A2P8Y1H3   A0A195DQP9   A0A2R7VZ87   K7IVX0   T1IGJ3   M5AK70   A0A151I5J0   A0A151WU91   A0A146LGD3   A0A195CJH1   A0A0A9XV66   A0A0K8SAR6   A0A195EVJ8   J9JWV8   E2BV71   A0A2S2PY51   U4ULV6   N6TVQ5   D2A4B9   A0A0T6B950   E0VMZ3   A0A182JP42   A0A182XAA3   A0A182QM64   A0A1Y9H8E9   A0A1I8JVJ9   A0A1S4H4J1   Q7PRJ8   A0A240PKM8   A0A182PBU8   A0A182HX07   A0A182UHK8   A0A1I8JVG5   A0A1I8JSZ6   A0A084VDA8   A0A1Y9IY62   A0A1Y9H1I7   A0A182NQ21   A0A182MQQ0   A0A182R919   A0A1Y9ITM8   A0A2C9GUG7   A0A1Y9HAA5   A0A182W867   A0A182YE24   A0A131Z393   A0A224YT64   A0A2H8TZT2   L7M2F9   A0A131XAI1   A0A1E1XIQ9   A0A226E532   A0A2M3Z8P5   A0A2M4AN91   W5JLF7   A0A182FBX4   A0A2R5LLR7   A0A2P6K5V3   A0A131XVU4   A0A1Z5L2Q4   A0A293N5D1   A0A1Y1LKC2   A0A1D2N746   E9GW23   A0A0P5AIW7   A0A182GCR3   A0A0P6G4B4   A0A0P5LCW5   Q177U9   A0A0P5N2V9   A0A1Q3F8F4   A0A0P5N1U0   A0A1S4FC74   A0A0P5V924   B0WM39   A0A0P6G6X0   A0A087U927   A0A0P4YQI1   A0A0P5V266   A0A0P4Y2I8   A0A0P4XRV5  

PDB

4ZRI     E-value=4.66159e-113,     Score=1045

KEGG

101744050    K16684 merlin | (RefSeq) merlin

PATHWAY

04391    Hippo signaling pathway - fly - Bombyx mori (domestic silkworm)
04392    Hippo signaling pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0008285   GO:0003779   GO:0005856   GO:0008092   GO:0005737   GO:0019898   GO:0006108   GO:0030060   GO:0016615   GO:0000049   GO:0016876  

Length:

611

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00588

Exp number, first 60 AAs:

0.00055

Total prob of N-in:

0.00129

outside

1  -  611

 

 

Pi

318.17095

Theta

160.178126

Tajima's D

3.715494

CLR

0.192281

CSRT

0.99730013499325

Interpretation

Uncertain