Silkworm Genome Informatics Database

Gene

KWMTBOMO09485

Pre Gene Modal

BGIBMGA013059

Annotation

PREDICTED:_uncharacterized_protein_LOC101743410_[Bombyx_mori]

Location

Bomo_Chr16(-):2293434-2294807 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.881

CDS

ATGTGTGAGGTTGCAAGTTGGATTCCGGACGCGGTCGCGGTCACACTGCGCGACGCTAGCTCCGTGCAGCCGGTCCTCGCCTGGCTGACTGCATTGCGAGCCTCCACTGAGGATTACGACCAACTCCCCGTCGTTGTTCCTGCCGAAGAATCGTCCCGCGCCTCCCCGGATAGCGCCTTCGACGAGATACTCTCGCAACTCGGAAAAGAAATCTTCAAGCTCGAGGAGTACCATCAAAACCTCCTCCCTCCGCCAGAGAAGGAGGTCTCCCTCAGCATCCTCAATATATTTGACGAATGCTTAGATCGGATGTCGGAAAAACAGTGTAATGGAAATGTGGAAGAGTGCAGTGAGTGCGAATCGACTCTATCCGACGTTTCCATGGCGACGAGTTTGCCCGCGAAAAGTGCCGATGTAAACAGTGACGTGAATTGTATTTTTGATAAGGGCGAGGGCACACCGGTACCGCCGCGCAGGACTAGATTCAAATCGTCGTCCTCTGTGGTTGTCGGGGACAATATGGAAGAAAATCTTGACGGTGAGCAACGGTCCAAGTGCACCCAGTCTGATAGCGATTCGGAGAGCACGTGTTGGAGCTACAAGGAGTGCAGTACGGAGACCGAGCAGGACGGTCGCGGGACCTACGCCGAGGTTTGGTCCCACTCGAGCGGCTTCCACAACTCGGACGAGATCCTGCGGAGCGTGCTTCGTCAGAATCACGCGACGGTGTCCTGCCTCTCGCTGGACTCGGCCCGCGACCTGGAGCCGGCGTCGTTCTCGGTGTACGCGCTGCACGAGGTGGGGGACAGGTGCGTATCGCCAGTCGCCGCGATGACGCCCGACCGGCCGATCGACCCCGACTACGAGCCCGTGCGGGACGCGCTCACCGACGAAAACATTTACGAGGAGATCGAGTACAGCTACACGGACGAGGGATGCTCCTGCGGCACCAGCGTCGAGGTCGAGACCTACTCCACCAGCTCCGGACGCGAGACTCCGTTATACGCAAACCTGACAGACAACGACGCGTACGCGATAACTCCGGATGTCATCTTCTGGAAGAACCTACTCTTAGATCCGTTCTACAACGAAGACGAAGAGGACGAGGTTGGTACAATTTGTTTCTATTGTTGA

Protein

MCEVASWIPDAVAVTLRDASSVQPVLAWLTALRASTEDYDQLPVVVPAEESSRASPDSAFDEILSQLGKEIFKLEEYHQNLLPPPEKEVSLSILNIFDECLDRMSEKQCNGNVEECSECESTLSDVSMATSLPAKSADVNSDVNCIFDKGEGTPVPPRRTRFKSSSSVVVGDNMEENLDGEQRSKCTQSDSDSESTCWSYKECSTETEQDGRGTYAEVWSHSSGFHNSDEILRSVLRQNHATVSCLSLDSARDLEPASFSVYALHEVGDRCVSPVAAMTPDRPIDPDYEPVRDALTDENIYEEIEYSYTDEGCSCGTSVEVETYSTSSGRETPLYANLTDNDAYAITPDVIFWKNLLLDPFYNEDEEDEVGTICFYC

Uniprot

H9JU47 A0A2H1W2U1 A0A2W1BWI9 A0A0L7L2U5 A0A2A4JY95 A0A0N0PC59 + More
A0A212FMV2

Pubmed

19121390 28756777 26227816 26354079 22118469

EMBL

BABH01004061 ODYU01005709 SOQ46824.1 KZ149935 PZC77170.1 JTDY01003300 + More
KOB69782.1 NWSH01000386 PCG76779.1 KQ460651 KPJ13027.1 AGBW02007651 OWR55071.1

Proteomes

UP000005204 UP000037510 UP000218220 UP000053240 UP000007151

PRIDE

H9JU47

Pfam

PF00620 RhoGAP

Interpro

IPR008936   Rho_GTPase_activation_prot        + More
IPR000198   RhoGAP_dom
IPR011993   PH-like_dom_sf
IPR001849   PH_domain

SUPFAM

SSF48350 SSF48350

Gene 3D

1.10.555.10 2.30.29.30

ProteinModelPortal

H9JU47 A0A2H1W2U1 A0A2W1BWI9 A0A0L7L2U5 A0A2A4JY95 A0A0N0PC59 + More
A0A212FMV2

KEGG

101743410 K20637 Rho GTPase-activating protein 15 | (RefSeq) uncharacterized LOC101743410

GO

GO:0007165 GO:0005096

Length:

377

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00367

Exp number, first 60 AAs:

0.00367

Total prob of N-in:

0.00756

outside

1 - 377

Pi

312.027412

Theta

226.581679

Tajima's D

1.187558

CLR

0.013369

CSRT

0.711114444277786

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics