SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09483
Pre Gene Modal
BGIBMGA012803
Annotation
Uncharacterized_protein_OBRU01_25930_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.548
 

Sequence

CDS
ATGACCGATAACCTCGCGTTGGATCAATACCAGCCAGCTCACATTAAGCTGGCAGGTGTCCCTCGGGACGCCCGCACGGACCTACCTATCAGGGCGAAGAGCGTCTGCTTGGCGGAGCGACTCCGCTCCAAATATGCAAGGGCCGTTCGCAGCGCCGATCCAAAACGCTTGCGATATCCCGATAAAACGTTTGTTCATCGCCAACCTTCCGCCGCCGATATTAAGCGTAGACAGTGTGCGAATAATAACGTTGTGATCAAACCGCAAAATAGGAAAATAGCGCAGAAACTACCGTGCGCTGTCTCCGTCCAAACTCTGTCTATAGCAATGAAGTATGCTGATAATCCCAAATCTAGGCATTCAACCTCCAAACTAAACCAGAACTTAGGTAACAATAAGCAGGTCGATATTAACAAGACTAAGCCAAATAATCCTCCTAAACAGGTCGCCGACAACAAGAGGCTGTGTCAGACTGTCGGCAGCGGAAAAGAGACGGAGAACAAACTATTATTACAGATCAGGGAAGCCGAACAAGTGTCTGACTTTGAAAGGATTCTTAATACTAATGCAATACTCTGCGAACGCGCGAAGAAACACGTGTGGCGCGCCTGCGGTCCCGCCCTTAAGCCGTCAGCATCCGTCTTGCCGCGACCGCGCTCGTCCTACTCTCTCTACACCGTGAGCCAAGCGTACCACTATCTTTTCAGACAGCACGAAAAATCTCTTCAGCCCCTCATCGATGAGTACCGCCAGACCACGGACGAGCAACGATCCGCCTGCCCGCCGTCGAGCCTGCTAGGCAACAACTGGTTTGATAATTTGCAAGACTTATCCGAATTTTACGAAGACGACCAAGCGTTGCGTAAAGAAGTAGAAACAATAACGGATCGCATAATAGCCGCTGAAGTTAAGGCTTCGGAGGTAAAACAACGATCTGACAAGAGGAGCAAGAACTTCAGAGTTAATTTGGCGGGACTGATCGGTCTGCACGTCAACGGCGAAGGCTGCTCCCCGAATCACGACGAATCTGGAACGTCCCCGGAAGTCGACAGGGACGCAAAGAACGAGGAGGAATGGCCCGCACCGATTATGAGCACGAACTCTAATGAAGAACGAATTTCACAGAACGCTATAAACGTGGAGTACTTGGCACGGAGTTTAGATTTGGTTAAAATCGAGAGTGATGAAGCTGAACAGCAGGCGTTGCCCAAGGACGACATGATCCAGAAGGCGGAGCCGACAACGTCACAAAGAACGCTGACTCGATCGAGCGCCATCAGCCAAAAGTCAGTGGACGTTATCGTTCACCCAGAGAGCTCGAACAATCCTCTTTACAGATCGAAGCTCGCGCCGGTCAGGTCGTCGTCAGAAACCCAACCGGGCAAGAAGACGATTACTTTGAGGAAAACAAAAAATTCGTCAATAGAATCAACGATGAGCCTTCCAAACCAGAAGTCTTTGGAGAAGAAGCACGGCGGGCTGCGGCACCAGAAGGCGGTGGGGGCGCAGTCGGACATCACGCTCACCACGCAGACATCCATCACGGACGACCGGAAGGCGTTGAGGGAAGCATTGTATCAGGGTATATTTCATAGGCACAGGAGGACGATTTTCGCGGTCGGCTCCTTCCTCAGGATGCTAAGGAGCAAAACTTCGAACTACGACTCAATAAGGTCGGATTCTGACGAGATATAG
Protein
MTDNLALDQYQPAHIKLAGVPRDARTDLPIRAKSVCLAERLRSKYARAVRSADPKRLRYPDKTFVHRQPSAADIKRRQCANNNVVIKPQNRKIAQKLPCAVSVQTLSIAMKYADNPKSRHSTSKLNQNLGNNKQVDINKTKPNNPPKQVADNKRLCQTVGSGKETENKLLLQIREAEQVSDFERILNTNAILCERAKKHVWRACGPALKPSASVLPRPRSSYSLYTVSQAYHYLFRQHEKSLQPLIDEYRQTTDEQRSACPPSSLLGNNWFDNLQDLSEFYEDDQALRKEVETITDRIIAAEVKASEVKQRSDKRSKNFRVNLAGLIGLHVNGEGCSPNHDESGTSPEVDRDAKNEEEWPAPIMSTNSNEERISQNAINVEYLARSLDLVKIESDEAEQQALPKDDMIQKAEPTTSQRTLTRSSAISQKSVDVIVHPESSNNPLYRSKLAPVRSSSETQPGKKTITLRKTKNSSIESTMSLPNQKSLEKKHGGLRHQKAVGAQSDITLTTQTSITDDRKALREALYQGIFHRHRRTIFAVGSFLRMLRSKTSNYDSIRSDSDEI

Summary

Ontologies

GO

Topology

Length:
564
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00155
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00121
outside
1  -  564
 
 

Population Genetic Test Statistics

Pi
201.721335
Theta
232.333938
Tajima's D
-0.49092
CLR
0.581239
CSRT
0.242237888105595
Interpretation
Uncertain
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