Gene

KWMTBOMO09481

Pre Gene Modal

BGIBMGA012801

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr16(+):2165528-2174102      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.464

CDS

ATGCGCGGTGTACGTTTTGGACACATAACGAGAATTAGTTTATTGTCGCTGCGTAAATTCTTCAATTACATTCAGGAAGGCGTCCCGGTCCGTATGCGGGCTATCCACGTTCTGAACACCGAACCCGTTTTGGATAAACTCATATTGTTGATCAGGCCGTTTATGGACAAAAAGTTTTTTGATATGATAAAATTCCACAACAAAACCGAAGACCTGGAATCGTTTTACGAAACGGCAATACCCAGGTCGTCCCTGCCACCGGACCACGGAGGAACGCTTCCCGACACCCAGACTCTGCACAAGAAATGCATGCAGCAACTCCAGCTCCTAGAGCCGTACTTCAAGGCTGAAGAGGAACAGAGAATCGCCGCTCTGCCCGACAAGAAACGGGAGAAGGCGATGGAGAAAGCCTTCAAGAATCTAGAGATAGATTAA

Protein

MRGVRFGHITRISLLSLRKFFNYIQEGVPVRMRAIHVLNTEPVLDKLILLIRPFMDKKFFDMIKFHNKTEDLESFYETAIPRSSLPPDHGGTLPDTQTLHKKCMQQLQLLEPYFKAEEEQRIAALPDKKREKAMEKAFKNLEID

Uniprot

A0A2W1BZD3   H9JTD9   A0A0S2Z353   A0A2A4JYQ6   A0A194Q0E0   A0A2H4RMT5   + More
A0A2H4RMT0   A0A1E1WUJ1   A0A212FMV7   A0A0L7LTE7   A0A437BBU4   A0A182R5Q7   A0A1B6JB60   A0A1B6ISW4   A0A182YP36   A0A182QMV7   A0A182PKF9   A0A182M2D4   A0A1L8DBU5   A0A1B6MQ64   A0A1L8DC92   A0A1B6MKT4   A0A182VY12   A0A2S2PVS5   A0A182UD92   A0A182N4K4   A0A182LAY9   A0A182WVC4   Q7QG16   A0A182I905   A0A182K9N6   A0A182US03   B0W3K4   A0A1Q3FJ52   A0A1B0CL61   A0A084VZX2   A0A1B6GXD7   A0A182J163   A0A023F815   W5JCQ4   A0A182H7H9   A0A023ENS0   A0A2M4AY24   Q16RH6   A0A182F946   A0A2M4BUV4   A0A2M4BV73   A0A2M4BV13   A0A2M4BVA0   A0A2H8TEU9   Q1HRG7   A0A1B6DDH3   A0A2R7WSN1   J9JP41   A0A1J1IPD0   K7IS61   A0A232F498   A0A170X858   A0A2S2QHT7   R4G355   A0A1S3DP78   A0A0C9RFG4   A0A336K1C6   A0A224XHE8   A0A2S2NPS6   E9IA70   A0A2M4BWV0   A0A139WGJ3   A0A0A9YEI6   A0A0A9YG14   A0A0K8TCH4   A0A146KP30   E2C418   A0A0A9YHJ0   A0A0K8TDH4   A0A067R4X7   A0A1B6E4Z5   A0A1B6D0A6   A0A026W2Z0   A0A3L8DTS9   E2BL70   A0A139WDA0   A0A2P8XNT8   A0A2J7PS36   A0A1B6KMT6   A0A195FRC0   D2A504   A0A195ECZ2   E2ADJ9   A0A1B6GM42   A0A139WD63   U4UZ61   A0A0J7KK55   A0A0J7NH54   A0A1Y1JX72   A0A1Y1JWP1   E9IJH9   N6TBB2   A0A1Y1LY65  

Pubmed

28756777    19121390    25684408    26354079    29136137    22118469    + More
26227816    25244985    20966253    12364791    14747013    17210077    24438588    25474469    20920257    23761445    26483478    24945155    17510324    17204158    20075255    28648823    21282665    18362917    19820115    25401762    26823975    20798317    24845553    24508170    30249741    29403074    23537049    28004739   

EMBL

KZ149935    PZC77173.1    BABH01004068    KT943560    ALQ33318.1    NWSH01000386    + More
PCG76774.1    KQ459582    KPI99047.1    MG434647    ATY51953.1    MG434636    ATY51942.1    GDQN01000406    JAT90648.1    AGBW02007651    OWR55075.1    JTDY01000160    KOB78516.1    RSAL01000093    RVE47886.1    GECU01023166    GECU01011302    JAS84540.1    JAS96404.1    GECU01017682    JAS90024.1    AXCN02000044    AXCM01004998    GFDF01010151    JAV03933.1    GEBQ01001890    JAT38087.1    GFDF01010150    JAV03934.1    GEBQ01003498    JAT36479.1    GGMR01020347    MBY32966.1    AAAB01008844    EAA05957.5    EGK96341.1    APCN01003147    DS231832    EDS31790.1    GFDL01007532    JAV27513.1    AJWK01016949    AJWK01016950    AJWK01016951    AJWK01016952    ATLV01019013    KE525259    KFB43516.1    GECZ01002683    JAS67086.1    GBBI01001305    JAC17407.1    ADMH02001893    ETN60609.1    JXUM01028270    JXUM01028271    JXUM01028272    JXUM01028273    GAPW01003012    JAC10586.1    GGFK01012359    MBW45680.1    CH477709    EAT37013.1    GGFJ01007719    MBW56860.1    GGFJ01007818    MBW56959.1    GGFJ01007467    MBW56608.1    GGFJ01007720    MBW56861.1    GFXV01000427    MBW12232.1    DQ440127    ABF18160.1    GEDC01013602    JAS23696.1    KK855438    PTY22572.1    ABLF02018999    ABLF02019001    ABLF02046099    CVRI01000057    CRL02024.1    NNAY01001062    OXU25290.1    GEMB01004696    JAR98592.1    GGMS01008081    MBY77284.1    ACPB03022651    GAHY01001986    JAA75524.1    GBYB01015329    GBYB01015330    JAG85096.1    JAG85097.1    UFQS01000022    UFQT01000022    SSW97612.1    SSX17998.1    GFTR01004510    JAW11916.1    GGMR01006562    MBY19181.1    GL761987    EFZ22528.1    GGFJ01008424    MBW57565.1    KQ971348    KYB26927.1    GBHO01013039    GBHO01013035    JAG30565.1    JAG30569.1    GBHO01013034    GBHO01013033    JAG30570.1    JAG30571.1    GBRD01002607    JAG63214.1    GDHC01021597    GDHC01008315    GDHC01002734    JAP97031.1    JAQ10314.1    JAQ15895.1    GL452364    EFN77404.1    GBHO01013038    GBHO01013036    JAG30566.1    JAG30568.1    GBRD01002606    JAG63215.1    KK852693    KDR18315.1    GEDC01004295    JAS33003.1    GEDC01018207    JAS19091.1    KK107459    EZA50388.1    QOIP01000004    RLU23712.1    GL448949    EFN83556.1    KQ971361    KYB25884.1    PYGN01001631    PSN33670.1    NEVH01021939    PNF19141.1    GEBQ01027209    JAT12768.1    KQ981305    KYN42976.1    EFA05290.2    KQ979074    KYN23073.1    GL438812    EFN68493.1    GECZ01006271    GECZ01004148    JAS63498.1    JAS65621.1    KYB25883.1    KI207135    ERL95635.1    LBMM01006207    KMQ90808.1    LBMM01005052    KMQ91855.1    GEZM01098820    JAV53733.1    GEZM01098819    JAV53734.1    GL763802    EFZ19284.1    APGK01044181    KB741021    ENN75018.1    GEZM01044921    JAV78041.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000037510    UP000283053    + More
UP000075900    UP000076408    UP000075886    UP000075885    UP000075883    UP000075920    UP000075902    UP000075884    UP000075882    UP000076407    UP000007062    UP000075840    UP000075881    UP000075903    UP000002320    UP000092461    UP000030765    UP000075880    UP000000673    UP000069940    UP000008820    UP000069272    UP000007819    UP000183832    UP000002358    UP000215335    UP000015103    UP000079169    UP000007266    UP000008237    UP000027135    UP000053097    UP000279307    UP000245037    UP000235965    UP000078541    UP000078492    UP000000311    UP000030742    UP000036403    UP000019118   

PRIDE

H9JTD9   

Pfam

PF00650   CRAL_TRIO        + More
PF07200   Mod_r

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR037202   ESCRT_assembly_dom       
IPR009851   Mod_r       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       
SSF140111   SSF140111       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A2W1BZD3   H9JTD9   A0A0S2Z353   A0A2A4JYQ6   A0A194Q0E0   A0A2H4RMT5   + More
A0A2H4RMT0   A0A1E1WUJ1   A0A212FMV7   A0A0L7LTE7   A0A437BBU4   A0A182R5Q7   A0A1B6JB60   A0A1B6ISW4   A0A182YP36   A0A182QMV7   A0A182PKF9   A0A182M2D4   A0A1L8DBU5   A0A1B6MQ64   A0A1L8DC92   A0A1B6MKT4   A0A182VY12   A0A2S2PVS5   A0A182UD92   A0A182N4K4   A0A182LAY9   A0A182WVC4   Q7QG16   A0A182I905   A0A182K9N6   A0A182US03   B0W3K4   A0A1Q3FJ52   A0A1B0CL61   A0A084VZX2   A0A1B6GXD7   A0A182J163   A0A023F815   W5JCQ4   A0A182H7H9   A0A023ENS0   A0A2M4AY24   Q16RH6   A0A182F946   A0A2M4BUV4   A0A2M4BV73   A0A2M4BV13   A0A2M4BVA0   A0A2H8TEU9   Q1HRG7   A0A1B6DDH3   A0A2R7WSN1   J9JP41   A0A1J1IPD0   K7IS61   A0A232F498   A0A170X858   A0A2S2QHT7   R4G355   A0A1S3DP78   A0A0C9RFG4   A0A336K1C6   A0A224XHE8   A0A2S2NPS6   E9IA70   A0A2M4BWV0   A0A139WGJ3   A0A0A9YEI6   A0A0A9YG14   A0A0K8TCH4   A0A146KP30   E2C418   A0A0A9YHJ0   A0A0K8TDH4   A0A067R4X7   A0A1B6E4Z5   A0A1B6D0A6   A0A026W2Z0   A0A3L8DTS9   E2BL70   A0A139WDA0   A0A2P8XNT8   A0A2J7PS36   A0A1B6KMT6   A0A195FRC0   D2A504   A0A195ECZ2   E2ADJ9   A0A1B6GM42   A0A139WD63   U4UZ61   A0A0J7KK55   A0A0J7NH54   A0A1Y1JX72   A0A1Y1JWP1   E9IJH9   N6TBB2   A0A1Y1LY65  

PDB

3HY5     E-value=0.00170996,     Score=92

KEGG

101736577    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0016021   GO:0015031  

Length:

144

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01851

Exp number, first 60 AAs:

0.01851

Total prob of N-in:

0.18309

outside

1  -  144

 

 

Pi

235.553656

Theta

169.294523

Tajima's D

1.318482

CLR

0.013322

CSRT

0.743062846857657

Interpretation

Uncertain