Gene

KWMTBOMO09479

Pre Gene Modal

BGIBMGA013061

Annotation

PREDICTED:_GPI_transamidase_component_PIG-S_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr16(-):2040844-2063822      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.706

CDS

ATGTGGGCCTCTGCTTCATTCGTAGGGGTCCTAATCATCATCGGGATGCCGCTATGGTGGAAAACTACGGAAGTCTACAGGGTGTCGCTGCCGTACGAAAAGATTTCATCGTTCAAACCTCTATCGCATTTCGTCACAACTGAACTGAAAGTCTTAGCCAACGATGACGCTACAGCATCTAAGATCGTCAGCGAGATACAGAAGGCATTTGCTGAATCTGATATAATAAAGATCAAAATCGAGAAAACAGTAATGTCGGAGCGACAACAGCACATTTTGCGGTCGGTGGTTGATATGGAGAAAGCCGTCGAAGAACTAGCTTCTACATTGGACCTCGACCAAGAAAATATATTCCACGTGGTGCAAAAGAAATCGTTGTCTCACAATATCTGGGTTGGCAACGAAAGAATAATGTTCTTCGATGATGAGAAAGCATCAGAAACGATAGTGAAAGCGTTAGACGGCTGGATATATCAGACTTCGGTACTCCGAGGATCCAGATCGGACACTCCTGATCAAGCCCGAAGCACGAGGTTCCCGCCGGAGTCGGCCTACCACATCACACTGTCCATAGTGCATCCAAGGCCTGATACAATGAAAGTTGTTTGGAATGCCGCTGAAGCTGTCGAGGATTACATTGGCAGCTTTGTCGACGAGTTAAGCTCCTTGCACAACTTCACGCTGAAGTCGCAATGGCTTCATCTACTCGACTTCGACTTTCAAGCTAGAGAGGTAAAAGAAGTCAGTGAATGGGGACGTCACTTCGCCGTGCGTCAGGACAGGCTGTCATTGTTATTGACAAGGCTCGAGGAACGAGCTGCGACGCACGTCTCTGAGCTATCAACGATCAACCTGGCGCTCTACATCGTTCCCTGCGATAAAGCTCCCATCATTATATACGATAATGAAGGTCGCAAAAATCCTTTGTCGATACAAGCATTTATGTCCCCCAAGTGGGGGGGCGTGGTGATCGCCAGTCCCCCGGCCGAGCAGTGCTCCCAGCAGGTCCGAGAGTTCGAGCCCAGCGTGGGACAGATCATGGGCGCGTTCGTGTCCCACCTCAGGGAGTTGCTCGGGATCACGAAAAAGGACGCAATCGAAGGAGCACACTTAGAGCCTTCGAGGTCGGTGTCGCCGCGCCGCTGGGAGGTGGACGCGCTACTCCGCATCAGGACCTTAGAGCAGGTCACATCCGCTGAAAGAACTCTACAGTCTCTAGCGCAATTATTGGAGGAGATATCGAACATAGTGATAAACGATGAAGTGGGCGCGTCCATCGCGGCCGCGGTGTCCGAGCTGGAGGCGGGCGCGGGGGAGGGCGCGGGGGCGGACGCGGCGCGGGCGGGGCGGGCGCACGCGCATGCGCAGCGCGCCTTCACGCACCCCGGTCTACTCGCACTGCTGTACTTCCCGGACGATCAGAAATACGCGATCTACATACCGTTGTTTTTACCGATAATGTTCCCGGTGGTTTTGTCATTGAGAATATTGTTATTATGGTTCATGGGGAAGCCGGTGCACAAAGAAAAAACTGATTGA

Protein

MWASASFVGVLIIIGMPLWWKTTEVYRVSLPYEKISSFKPLSHFVTTELKVLANDDATASKIVSEIQKAFAESDIIKIKIEKTVMSERQQHILRSVVDMEKAVEELASTLDLDQENIFHVVQKKSLSHNIWVGNERIMFFDDEKASETIVKALDGWIYQTSVLRGSRSDTPDQARSTRFPPESAYHITLSIVHPRPDTMKVVWNAAEAVEDYIGSFVDELSSLHNFTLKSQWLHLLDFDFQAREVKEVSEWGRHFAVRQDRLSLLLTRLEERAATHVSELSTINLALYIVPCDKAPIIIYDNEGRKNPLSIQAFMSPKWGGVVIASPPAEQCSQQVREFEPSVGQIMGAFVSHLRELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSAERTLQSLAQLLEEISNIVINDEVGASIAAAVSELEAGAGEGAGADAARAGRAHAHAQRAFTHPGLLALLYFPDDQKYAIYIPLFLPIMFPVVLSLRILLLWFMGKPVHKEKTD

Uniprot

A0A2H1VAI5   A0A2A4JFF9   A0A3S2PD05   A0A194Q220   A0A212FMZ7   A0A0N0PC78   + More
A0A2H1WHA7   A0A087ZP46   A0A2A3EPX6   F4W7J1   A0A195EL23   A0A158NPY5   A0A151X8H3   A0A195ESL5   A0A0N0U5B5   E9IWW3   A0A2A3ENP4   E2AWA0   A0A2J7QAS0   A0A2J7QAQ0   A0A2J7QAR0   A0A154PRQ6   V9I7U5   A0A0J7KT94   A0A195ATP6   A0A067QRZ5   A0A0L7RA97   W8BSR2   A0A026WU23   E2BYK5   A0A0K8U5I9   A0A034WBH5   A0A1B6LI78   A0A0A1X6D4   K7IW73   A0A232FE10   A0A1I8JW47   A0A1B6GFU4   Q7QD35   A0A336KT59   A0A1I8PFA1   A0A182Q707   W5JK02   A0A2M4CGM8   A0A2M4CG41   Q171Z3   A0A2M4BIC2   D3TNH7   A0A2M4BID8   A0A182UY32   E0VVQ2   A0A1I8M0S5   A0A2M4AK84   A0A182TQJ0   A0A182LG37   A0A0L0CQJ2   A0A182M739   H6WAR0   A0A1B0BTU3   A0A182FNT1   A0A1A9XDK3   A0A182VRR3   A0A182XV12   A0A1W4VKY4   A0A1B0CEZ4   A0A2P8XP31   A0A182GSS5   A0A1A9ZGD9   A0A182GU49   A0A182JXQ6   B4PV15   B4QU73   A0A0N8P1P5   Q9VC10   U5EV01   B3P6V6   B8A3W8   A0A1L8E3R1   A0A182NLH8   Q86NX1   B5DXD5   B4M653   B4JYA3   T1HSQ2   A0A3L8DAA6   A0A224XLJ6   R4FKN9   A0A0V0G8U0   A0A3B0JD79   A0A182HTZ1   B4G3K7   A0A1J1J3M9   A0A1A9WRR7   B4KBS4   B4NI44   A0A0M4EUJ5   A0A1A9VTW3  

Pubmed

26354079    22118469    21719571    21347285    21282665    20798317    + More
24845553    24495485    24508170    25348373    25830018    20075255    28648823    12364791    14747013    17210077    20920257    23761445    17510324    20353571    20566863    25315136    20966253    26108605    23055932    25244985    29403074    26483478    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    30249741   

EMBL

ODYU01001508    SOQ37811.1    NWSH01001675    PCG70448.1    RSAL01000093    RVE47889.1    + More
KQ459582    KPI99044.1    AGBW02007651    OWR55079.1    KQ460651    KPJ13034.1    ODYU01008673    SOQ52455.1    KZ288204    PBC33322.1    GL887844    EGI69864.1    KQ978730    KYN28955.1    ADTU01022700    ADTU01022701    ADTU01022702    KQ982409    KYQ56676.1    KQ981986    KYN31240.1    KQ435784    KOX74552.1    GL766616    EFZ14930.1    PBC33320.1    GL443269    EFN62290.1    NEVH01016329    PNF25674.1    PNF25670.1    PNF25673.1    KQ435090    KZC14605.1    JR036511    JR036513    AEY57188.1    AEY57190.1    LBMM01003497    KMQ93464.1    KQ976745    KYM75427.1    KK853383    KDR07999.1    KQ414619    KOC67769.1    GAMC01004368    JAC02188.1    KK107105    EZA59527.1    GL451493    EFN79210.1    GDHF01030674    GDHF01002354    JAI21640.1    JAI49960.1    GAKP01007457    GAKP01007456    JAC51495.1    GEBQ01016594    JAT23383.1    GBXI01007433    JAD06859.1    NNAY01000414    OXU28577.1    GECZ01008465    JAS61304.1    AAAB01008859    EAA07616.5    UFQS01000993    UFQT01000993    SSX08310.1    SSX28333.1    AXCN02000138    ADMH02001019    ETN64436.1    GGFL01000133    MBW64311.1    GGFL01000134    MBW64312.1    CH477443    EAT40793.1    GGFJ01003665    MBW52806.1    EZ422979    ADD19255.1    GGFJ01003666    MBW52807.1    DS235813    EEB17458.1    GGFK01007878    MBW41199.1    JRES01000062    KNC34516.1    AXCM01000497    JQ042683    AEZ67828.1    JXJN01020367    AJWK01009480    PYGN01001609    PSN33756.1    JXUM01017367    JXUM01017368    KQ560481    KXJ82201.1    JXUM01088539    JXUM01088540    JXUM01088541    KQ563708    KXJ73459.1    CM000160    EDW98864.1    CM000364    EDX14310.1    CH902617    KPU80500.1    AE014297    AY061834    AAF56366.2    AAL27645.1    GANO01002094    JAB57777.1    CH954182    EDV53776.1    BT056260    ACL68707.1    GFDF01000939    JAV13145.1    BT003598    AAO39601.1    CM000070    EDY67871.2    CH940652    EDW59129.2    CH916377    EDV90665.1    ACPB03006555    QOIP01000011    RLU17264.1    GFTR01006954    JAW09472.1    GAHY01001763    JAA75747.1    GECL01001988    JAP04136.1    OUUW01000005    SPP80334.1    APCN01000594    CH479179    EDW25015.1    CVRI01000069    CRL06983.1    CH933806    EDW14751.2    CH964272    EDW84736.2    CP012526    ALC46780.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000007151    UP000053240    UP000005203    + More
UP000242457    UP000007755    UP000078492    UP000005205    UP000075809    UP000078541    UP000053105    UP000000311    UP000235965    UP000076502    UP000036403    UP000078540    UP000027135    UP000053825    UP000053097    UP000008237    UP000002358    UP000215335    UP000076407    UP000007062    UP000095300    UP000075886    UP000000673    UP000008820    UP000075903    UP000009046    UP000095301    UP000075902    UP000075882    UP000037069    UP000075883    UP000092460    UP000069272    UP000092443    UP000075920    UP000076408    UP000192221    UP000092461    UP000245037    UP000069940    UP000249989    UP000092445    UP000075881    UP000002282    UP000000304    UP000007801    UP000000803    UP000008711    UP000075884    UP000001819    UP000008792    UP000001070    UP000015103    UP000279307    UP000268350    UP000075840    UP000008744    UP000183832    UP000091820    UP000009192    UP000007798    UP000092553    UP000078200   

PRIDE

Q9VC10    B8A3W8    Q86NX1   

Pfam

PF10510   PIG-S        + More
PF13661   2OG-FeII_Oxy_4
PF10637   Ofd1_CTDD
PF00781   DAGK_cat

Interpro

IPR019540   PtdIno-glycan_biosynth_class_S        + More
IPR006620   Pro_4_hyd_alph       
IPR019601   Oxoglutarate/Fe-dep_Oase_C       
IPR005123   Oxoglu/Fe-dep_dioxygenase       
IPR039558   TPA1/OFD1_N       
IPR017438   ATP-NAD_kinase_N       
IPR016064   NAD/diacylglycerol_kinase_sf       
IPR001206   Diacylglycerol_kinase_cat_dom       

SUPFAM

SSF111331   SSF111331       

Gene 3D

3.40.50.10330    

ProteinModelPortal

A0A2H1VAI5   A0A2A4JFF9   A0A3S2PD05   A0A194Q220   A0A212FMZ7   A0A0N0PC78   + More
A0A2H1WHA7   A0A087ZP46   A0A2A3EPX6   F4W7J1   A0A195EL23   A0A158NPY5   A0A151X8H3   A0A195ESL5   A0A0N0U5B5   E9IWW3   A0A2A3ENP4   E2AWA0   A0A2J7QAS0   A0A2J7QAQ0   A0A2J7QAR0   A0A154PRQ6   V9I7U5   A0A0J7KT94   A0A195ATP6   A0A067QRZ5   A0A0L7RA97   W8BSR2   A0A026WU23   E2BYK5   A0A0K8U5I9   A0A034WBH5   A0A1B6LI78   A0A0A1X6D4   K7IW73   A0A232FE10   A0A1I8JW47   A0A1B6GFU4   Q7QD35   A0A336KT59   A0A1I8PFA1   A0A182Q707   W5JK02   A0A2M4CGM8   A0A2M4CG41   Q171Z3   A0A2M4BIC2   D3TNH7   A0A2M4BID8   A0A182UY32   E0VVQ2   A0A1I8M0S5   A0A2M4AK84   A0A182TQJ0   A0A182LG37   A0A0L0CQJ2   A0A182M739   H6WAR0   A0A1B0BTU3   A0A182FNT1   A0A1A9XDK3   A0A182VRR3   A0A182XV12   A0A1W4VKY4   A0A1B0CEZ4   A0A2P8XP31   A0A182GSS5   A0A1A9ZGD9   A0A182GU49   A0A182JXQ6   B4PV15   B4QU73   A0A0N8P1P5   Q9VC10   U5EV01   B3P6V6   B8A3W8   A0A1L8E3R1   A0A182NLH8   Q86NX1   B5DXD5   B4M653   B4JYA3   T1HSQ2   A0A3L8DAA6   A0A224XLJ6   R4FKN9   A0A0V0G8U0   A0A3B0JD79   A0A182HTZ1   B4G3K7   A0A1J1J3M9   A0A1A9WRR7   B4KBS4   B4NI44   A0A0M4EUJ5   A0A1A9VTW3  

KEGG

101736721    K05291 GPI-anchor transamidase subunit S | (RefSeq) GPI transamidase component PIG-S

PATHWAY

00563    Glycosylphosphatidylinositol (GPI)-anchor biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016255   GO:0042765   GO:0016021   GO:0005506   GO:0031418   GO:0016706   GO:0003951   GO:0045313   GO:0016491   GO:0031544   GO:0012505   GO:0006506   GO:0016787   GO:0005654   GO:0016616   GO:0019752   GO:0006108   GO:0030060   GO:0016615   GO:0000049   GO:0016876  

PANTHER

PTHR21072  

Length:

512

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

36.31497

Exp number, first 60 AAs:

13.36438

Total prob of N-in:

0.69734

POSSIBLE N-term signal

sequence

inside

1  -  1

TMhelix

2  -  20

outside

21  -  476

TMhelix

477  -  499

inside

500  -  512

 

 

Pi

211.171097

Theta

159.952758

Tajima's D

1.504466

CLR

0.202128

CSRT

0.782310884455777

Interpretation

Uncertain