SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09476
Pre Gene Modal
BGIBMGA013062
Annotation
PREDICTED:_ataxin-2-like_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.008
 

Sequence

CDS
ATGCATTTGGAACTTCGTAAGTTTGGTCAAGAATTCAAGTTGGTGTCTTCCCCCGCTCCCCCCGCGCAGCCCGCCCTCCCCGCCGCCCTCCCCACCGCCCTCTCGGCCGCCACGCATCCGCAACATAACCCACAACCTGCGGTTCAACAAGTACAACAGGTTCAGCAAGTTCAACAAGTTCAGCAAGTCCAACAACAAGTACAGCAAGTACAACAACAAGTGCAGCAAGTTGTTGTGCAGCAAGCGTCCCACCGCGCGTGCTCGCCGCCGGAGGTGTCCGCGATGTCCGGCGCTCCTCCCGAACACCACAAGCGGCCTCCGCCCCACCAGACGCCTCCTGCACATCATAATAAGTCTGTCTCTACACAACAACAAACGCAACAGCAGCAGACTGAGAGTGGCTCAGAGCGAGAGAGTCCGGCAGCTGTCTCCCCCGGAGTGGCTCTCACCCTCAAGAAGTCTACCCTCAACCCCAACGCGAAGGAATTCAACCCTGCAGTTAAAACTTTCACGCCGAGGTCTCCAACCACGCCCACACCTAGCCGGCCACACACGCCGGGCACGCCGTCGGGCGTGGGGCTGTCCGGAGTGAGCGTGATGGGCCCCGGGCTGGGCTACGTGCCCGCCGCACACCCCGGACCCCCGCACATGGTTGCAGCCGTGCCCTACGCGATGGTGGCCACCCAGCAGCCTCCCACATACCTTCCGCACCCGCACCCAGCGCTGGCGTATGGAGCGGCAATGGGAGGCGGGGCCGGGGTGGCAGCCGGCGCCGGCCAGCACGCGCCCATACCTACACAGCAGCAGAGGAACTTCAGAAAGATGGGCGTCGGCTCCGGCATGCAGGTCGCAGCGGCCACCGGCCAGCCCCTGCTGACCCCGGCGCCCATGCAGCCCTTCATGCCGTACCCGCACCCGCCGCCGCATCCGCAGCCGGCCATCTCCTACCAGCACATGGTGAGTCTTGCCTTACTCGTACCTCACATAATGCGTGCAAACTTAGGCCTAGGACCATCACGCAAGAAGGTCAAATATCCCGTGATTGGCTAG
Protein
MHLELRKFGQEFKLVSSPAPPAQPALPAALPTALSAATHPQHNPQPAVQQVQQVQQVQQVQQVQQQVQQVQQQVQQVVVQQASHRACSPPEVSAMSGAPPEHHKRPPPHQTPPAHHNKSVSTQQQTQQQQTESGSERESPAAVSPGVALTLKKSTLNPNAKEFNPAVKTFTPRSPTTPTPSRPHTPGTPSGVGLSGVSVMGPGLGYVPAAHPGPPHMVAAVPYAMVATQQPPTYLPHPHPALAYGAAMGGGAGVAAGAGQHAPIPTQQQRNFRKMGVGSGMQVAAATGQPLLTPAPMQPFMPYPHPPPHPQPAISYQHMVSLALLVPHIMRANLGLGPSRKKVKYPVIG

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
349
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.21514
Exp number, first 60 AAs:
0.00025
Total prob of N-in:
0.01581
outside
1  -  349
 
 

Population Genetic Test Statistics

Pi
229.514347
Theta
169.268028
Tajima's D
0.07148
CLR
16.618995
CSRT
0.388680565971701
Interpretation
Uncertain
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