Gene

KWMTBOMO09467  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013070

Annotation

PREDICTED:_hsp70-binding_protein_1_[Amyelois_transitella]

Location

Bomo_Chr16(-):1703517-1708682      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.674 Extracellular   Reliability : 1.475 Nuclear   Reliability : 1.152

CDS

ATGAGTTCGAATAATACGCAGAATAACACGATTGCCGGAGCTCTGACTTATCCGACAAGAAGTCAAGATGAAGTCCTACCAAATCAGCCGAGGCAGCCAAGAAACCTGCAAGGACTTTTACGGTTTGCAATGGAAGCCACAAAAGCTGAAGATGCACCAGGGAACTCGGAATTAGGACCAATTGATGATGAAAGACGCAAATTCCTTGAAGACGCCCTAAAGAGTCTGACAGTGAACATTGCTGAAGTGTTACTGAACGCCATCAGAATTCTCACCAATACTGAAAGGATTCGTAGCATACAGTTTGGGGAACCACTACCAGAAGACGTACAGGCGGCTTTTGACAATGTCCTTGAATATATTGACGATATTGATACAGCAAATGACTTCTATAAGATGGGAGGGTTTGCTATGTTTCCAATATGCTATGGAAGCGAAAATGAGAAGGTCCGTGCCCTCGCCAGTACGGTCCTGGCTGAGCTCTGTCAGAACAATCCGTTCTGCCAGGAGAAGTTCTTAGAGTACGGTCTGCTGAACGTTCTACTCACTCTAGTGCAATCAGAGCAAGGCGAAGCCCTCGTCAAGTGCCTATATGCTTTATCATGCGGTTGCCGCGAGTACTCGCCCGCGTGTCGCTCGCTGGTGTCGCGCGGGGGGTGCGGGGCGTTGGGGGCGGCGCTGGCGCAGGACGAGCCCTCCGCCAGGACCAAGGCCGCCTTCCTCATCAGGTACCTGGCCAGCCAATACAGCGACGCTAAAGAGCAGTTCATCCAGCACAATGTAGTCAGGACCATAGCTGAACAACTGAGAGGGGGTCGTGACGCGACCAGTGAGCACTTCCTGAACTTACTCTGCACTCTGCTCGAGGACCTGGACCCCAGGGTCCTGGACCAATGCCGGGACCCCACCCTACACTTGAAGGAGACTTTAGAACAACACTTAGGACACCCTGAGCTGGAAAGTTTTACGGAAGAAAAGGAGTATTGTGAAGAGATCCTCAGGAAGGTGTTTGTCGGGCATAAGCCAGTGGAGATCGTGGTTGAAGAAGCCGATAGATAG

Protein

MSSNNTQNNTIAGALTYPTRSQDEVLPNQPRQPRNLQGLLRFAMEATKAEDAPGNSELGPIDDERRKFLEDALKSLTVNIAEVLLNAIRILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDIDTANDFYKMGGFAMFPICYGSENEKVRALASTVLAELCQNNPFCQEKFLEYGLLNVLLTLVQSEQGEALVKCLYALSCGCREYSPACRSLVSRGGCGALGAALAQDEPSARTKAAFLIRYLASQYSDAKEQFIQHNVVRTIAEQLRGGRDATSEHFLNLLCTLLEDLDPRVLDQCRDPTLHLKETLEQHLGHPELESFTEEKEYCEEILRKVFVGHKPVEIVVEEADR

Similarity

Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.

Uniprot

H9JU58   S4PMK3   A0A437BC08   A0A212FMW3   A0A2A4K4A3   A0A2W1BWZ2   + More
A0A0N0PC63   I4DKG5   A0A1Y1N9D1   K7IM62   D6X1Z2   A0A0T6B7Z3   A0A1W4X300   A0A411G6F2   A0A154PA11   V5G7K4   A0A195DDV7   A0A2J7QZD9   A0A0L7RDC2   A0A232EZB7   E1ZYB3   A0A195FUD3   A0A0N0U2Z3   U5EHS2   A0A158P457   A0A195C632   A0A087ZNK4   A0A195BD66   Q17K40   A0A182H8P6   A0A1S4F003   A0A023ENC3   A0A023ENB3   A0A182QC69   Q17K39   A0A182XFX1   A0A182TFV7   A0A182L0I5   Q7PN96   A0A182IC56   A0A1S4EZU1   A0A2A3E3S7   A0A067QRK3   A0A182VJL0   A0A151X9Z8   A0A084WH63   J3JWM2   A0A182NU06   A0A182KG39   A0A182S8X8   A0A182JEQ4   A0A182PLS3   A0A026WYI9   A0A182YDT5   R4WDY6   A0A1Q3FED5   E2B4J1   A0A2U9IAV0   A0A1S4J085   A0A1J1I678   A0A0P5G7V8   E0VPZ3   A0A336MNE5   A0A0P6I5D6   A0A0N8AXI8   A0A1E1XA21   A0A0P4X0P1   A0A023GIJ3   A0A433U8V5   A0A0A9XFZ8   A0A0K8TDS5   A0A0B8RPC7   A0A0N8AIG0   A0A0P4XIJ2   A0A2R7WD43   B0VZZ3   A0A0P4X077   E9J2L1   A0A1E1XR90   A0A0J7K3L2   A0A3Q0JIB5   A0A131YA91   V5HP71   A0A131XHA3   A0A224XNC0  

Pubmed

19121390    23622113    22118469    28756777    26354079    22651552    + More
28004739    20075255    18362917    19820115    28648823    20798317    21347285    17510324    26483478    24945155    20966253    12364791    14747013    17210077    24845553    24438588    22516182    23537049    24508170    30249741    25244985    23691247    20566863    28503490    25401762    26823975    21282665    29209593    25765539    28049606   

EMBL

BABH01004119    GAIX01003510    JAA89050.1    RSAL01000093    RVE47903.1    AGBW02007651    + More
OWR55092.1    NWSH01000176    PCG78738.1    KZ149935    PZC77196.1    KQ460651    KPJ13047.1    AK401783    KQ459582    BAM18405.1    KPI99029.1    GEZM01014118    JAV92197.1    KQ971371    EFA09946.1    LJIG01009263    KRT83430.1    MH365661    QBB01470.1    KQ434856    KZC08673.1    GALX01002351    JAB66115.1    KQ980989    KYN10604.1    NEVH01009070    PNF33925.1    KQ414614    KOC68800.1    NNAY01001594    OXU23488.1    GL435204    EFN73812.1    KQ981264    KYN44031.1    KQ438551    KOX67201.1    GANO01002904    JAB56967.1    ADTU01001346    KQ978220    KYM96307.1    KQ976519    KYM82152.1    CH477228    EAT47053.1    JXUM01118898    KQ566235    KXJ70295.1    GAPW01002696    JAC10902.1    GAPW01002695    JAC10903.1    AXCN02000808    EAT47052.1    AAAB01008964    EAA12545.5    APCN01000775    KZ288427    PBC25906.1    KK853042    KDR12144.1    KQ982353    KYQ57202.1    ATLV01023791    KE525346    KFB49557.1    APGK01019170    BT127640    KB740092    KB632310    AEE62602.1    ENN81479.1    ERL92102.1    KK107064    QOIP01000008    EZA60831.1    RLU19169.1    AK417974    BAN21189.1    GFDL01009136    JAV25909.1    GL445565    EFN89391.1    MF797800    AWR93091.1    CVRI01000038    CRK94438.1    GDIQ01246006    LRGB01000944    JAK05719.1    KZS14854.1    DS235379    EEB15449.1    UFQS01001121    UFQT01001121    UFQT01001734    SSX09102.1    SSX31570.1    GDIQ01016625    JAN78112.1    GDIQ01233155    JAK18570.1    GFAC01003084    JAT96104.1    GDIP01249396    JAI74005.1    GBBM01001702    JAC33716.1    RQTK01000037    RUS90247.1    GBHO01023983    GBHO01023982    GBHO01023981    GDHC01006148    GDHC01001932    JAG19621.1    JAG19622.1    JAG19623.1    JAQ12481.1    JAQ16697.1    GBRD01002506    JAG63315.1    GBRD01002507    JAG63314.1    GDIP01144257    JAJ79145.1    GDIP01242563    JAI80838.1    KK854643    PTY17572.1    DS231816    EDS37565.1    GDRN01039609    JAI67186.1    GL767895    EFZ12946.1    GFAA01001602    JAU01833.1    LBMM01015172    KMQ84904.1    GEFM01000371    JAP75425.1    GANP01004704    JAB79764.1    GEFH01003026    JAP65555.1    GFTR01005108    JAW11318.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000218220    UP000053240    UP000053268    + More
UP000002358    UP000007266    UP000192223    UP000076502    UP000078492    UP000235965    UP000053825    UP000215335    UP000000311    UP000078541    UP000053105    UP000005205    UP000078542    UP000005203    UP000078540    UP000008820    UP000069940    UP000249989    UP000075886    UP000076407    UP000075902    UP000075882    UP000007062    UP000075840    UP000242457    UP000027135    UP000075903    UP000075809    UP000030765    UP000019118    UP000030742    UP000075884    UP000075881    UP000075901    UP000075880    UP000075885    UP000053097    UP000279307    UP000076408    UP000008237    UP000183832    UP000076858    UP000009046    UP000271974    UP000002320    UP000036403    UP000079169   

PRIDE

H9JU58   

Pfam

PF08609   Fes1        + More
PF02150   RNA_POL_M_15KD
PF01096   TFIIS_C

Interpro

IPR016024   ARM-type_fold        + More
IPR011989   ARM-like       
IPR013918   Nucleotide_exch_fac_Fes1       
IPR000225   Armadillo       
IPR019761   DNA-dir_RNA_pol-M_15_CS       
IPR001529   DNA-dir_RNA_pol_M/15kDasu       
IPR001222   Znf_TFIIS       
IPR034012   Zn_ribbon_RPB9_C       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

CDD

cd10508  Zn-ribbon_RPB9

ProteinModelPortal

H9JU58   S4PMK3   A0A437BC08   A0A212FMW3   A0A2A4K4A3   A0A2W1BWZ2   + More
A0A0N0PC63   I4DKG5   A0A1Y1N9D1   K7IM62   D6X1Z2   A0A0T6B7Z3   A0A1W4X300   A0A411G6F2   A0A154PA11   V5G7K4   A0A195DDV7   A0A2J7QZD9   A0A0L7RDC2   A0A232EZB7   E1ZYB3   A0A195FUD3   A0A0N0U2Z3   U5EHS2   A0A158P457   A0A195C632   A0A087ZNK4   A0A195BD66   Q17K40   A0A182H8P6   A0A1S4F003   A0A023ENC3   A0A023ENB3   A0A182QC69   Q17K39   A0A182XFX1   A0A182TFV7   A0A182L0I5   Q7PN96   A0A182IC56   A0A1S4EZU1   A0A2A3E3S7   A0A067QRK3   A0A182VJL0   A0A151X9Z8   A0A084WH63   J3JWM2   A0A182NU06   A0A182KG39   A0A182S8X8   A0A182JEQ4   A0A182PLS3   A0A026WYI9   A0A182YDT5   R4WDY6   A0A1Q3FED5   E2B4J1   A0A2U9IAV0   A0A1S4J085   A0A1J1I678   A0A0P5G7V8   E0VPZ3   A0A336MNE5   A0A0P6I5D6   A0A0N8AXI8   A0A1E1XA21   A0A0P4X0P1   A0A023GIJ3   A0A433U8V5   A0A0A9XFZ8   A0A0K8TDS5   A0A0B8RPC7   A0A0N8AIG0   A0A0P4XIJ2   A0A2R7WD43   B0VZZ3   A0A0P4X077   E9J2L1   A0A1E1XR90   A0A0J7K3L2   A0A3Q0JIB5   A0A131YA91   V5HP71   A0A131XHA3   A0A224XNC0  

KEGG

101737590    K09562 hsp70-interacting protein | (RefSeq) hsp70-binding protein 1

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0005737   GO:0005783   GO:0000774   GO:0006351   GO:0003676   GO:0008270   GO:0006379   GO:0003899   GO:0016021   GO:0005488   GO:0006508   GO:0008271   GO:0016020   GO:0016301   GO:0016773   GO:0006418   GO:0000049   GO:0016876  

Length:

352

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12164

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09429

outside

1  -  352

 

 

Pi

195.90157

Theta

166.432921

Tajima's D

0.688479

CLR

0.875037

CSRT

0.564721763911804

Interpretation

Uncertain