Gene

KWMTBOMO09461

Pre Gene Modal

BGIBMGA012789

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_A_member_5-like_[Bombyx_mori]

Location

Bomo_Chr16(+):1546051-1554555      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.944

CDS

ATGCTGTGCGGTCTACTGCTGCTGTACAGTCCCTCCGCCATACTGTTCAATACGTGCCTCTCGTACATATTCGACAAGATGGACTCCGCCCAGAGCATCATGCCGAACATCACGACCTGGGTCGGAGTCATCCCGTTCATCTTGGTCGCTGTTCTCGACACCTTTAAATGGGGCAGCGACATCGCGTTCTACCTTCACCTGGTGTTCAGCTTCCTGGACGTCATGTACATACCGTACGCCATCATGTACTATGTCGACAGGGTATATGTGACGTGCAACCTCCGGGGGGTGTGCACTACCCCCACCCTGGGCAGCTACTTCACGGCGGAGGTGTGGGTGCTGATCGCCGCCATGCTGCTACACGTGCCGCTCTGCGGGGCCGCACTCCTCGCCGCCGACAAGCTCAAGACTGGGGGAATCGCGGCCTTTAGAAGTCGCAAGCGCTCCGAGACGAGAGCGGGGAGCGTGAGCGGCGCGGGGGTAGGGGCGGCGGGCGCGGGGGGCGAGGAGGCGGCGTACGGCACGGAGGGGGGCGAGGACGGTGACGTCAAGCGAGAGAGACGACGGGTCGCCAACATACTCGCCAGCAACCAGAACAACATGCCACCCTTACTTGTTCATAACCTTCGGAAAGAGTACAAAGTGCGCGGTACGGAGGACGGTGGGGGCTGCTTTGGTGACAGCAAGAGTCCCACGCGGCGGTCTCGGAGGACCGGCCTGGCGAGGCTGAGCTTGGCCGTGGAGGGAGGGGAGGTGTTCGGGCTCTTGGGCCATAACGGAGCCGGGAAAACCACTACAATGAAGATTATTACTGCCGAAGAGAGACCTACTTGTGGAACGGTAATGCTTGGTAGTCAAGACATAAGGGATTCCCAAGCGTCAGCGTTCCGCATGCTGGGCTACTGTCCGCAGCACGACGCGCTGTGGAAGAACGTCACCATCCGGGAGCACATCGAGTGCTACGCCGCCATCCGGGGGGTCAGCAACCAGGACATACCCCGGATCGTGGACGCATACCTAAACGGTCTTCAAATAGCAGAGCACGCCGGTAAGAACGCGGAGGAATGCTCCGGGGGAACTCGTCGTAAGCTGTCCTTTGCTTTGGCCATGGTGGGTGCACCACGCGTGGTGCTGCTAGACGAGCCCTCCACCGGGATGGACCCGAGGAGCAAGAGATTCCTATGGGACACCATTCTTGCCAGCTTCCAGGGTAAGAAAGGTGCCATACTAACGACACATTCCATGGAAGAGGCTGATGCATTATGTTCCAGAGTTGGGATCATGGTTAAGGGGAGTTTGAGGTGTATCGGTTCAACGCAACACTTGAAGAATCTATACGGAGCCGGGTACACGCTGGAGATGAAGATAGGGCAGACCAATCAGAAATCAACGGTATGTTAA

Protein

MLCGLLLLYSPSAILFNTCLSYIFDKMDSAQSIMPNITTWVGVIPFILVAVLDTFKWGSDIAFYLHLVFSFLDVMYIPYAIMYYVDRVYVTCNLRGVCTTPTLGSYFTAEVWVLIAAMLLHVPLCGAALLAADKLKTGGIAAFRSRKRSETRAGSVSGAGVGAAGAGGEEAAYGTEGGEDGDVKRERRRVANILASNQNNMPPLLVHNLRKEYKVRGTEDGGGCFGDSKSPTRRSRRTGLARLSLAVEGGEVFGLLGHNGAGKTTTMKIITAEERPTCGTVMLGSQDIRDSQASAFRMLGYCPQHDALWKNVTIREHIECYAAIRGVSNQDIPRIVDAYLNGLQIAEHAGKNAEECSGGTRRKLSFALAMVGAPRVVLLDEPSTGMDPRSKRFLWDTILASFQGKKGAILTTHSMEEADALCSRVGIMVKGSLRCIGSTQHLKNLYGAGYTLEMKIGQTNQKSTVC

Similarity

Belongs to the peptidase S1 family.

Uniprot

H9JTC7   A0A2W1BQ17   A0A2A4IY78   A0A3S2LJA8   A0A2H1V1C0   A0A194Q201   + More
E2ACV7   A0A0T6BE97   A0A2J7PMF3   A0A2J7PME9   A0A067R5U3   A0A026WAC0   A0A3L8DZH5   A0A154PKS0   A0A0C9QXZ8   A0A0C9R779   A0A2A3E528   A0A0L7R8K5   A0A088A6H6   E2BWV8   E0VHQ3   A0A0M8ZPX7   K7IRX5   A0A232EPW5   D2A4C6   A0A1Y1ME33   A0A182T3A9   A0A151JMM8   A0A195BY13   A0A182UU28   U4U0E3   A0A195CTJ9   A0A0J7KX87   A0A195F057   A0A2J7PME8   A0A182J101   A0A084VBW2   A0A1Y9HDT4   A0A182XB03   A0A182HX76   A0A1S4H3X5   A0A182PEV1   A0A182YLY5   A0A182W3R0   W5JB00   A0A182NDJ3   A0A182FM13   A0A182MP80   A0A182PZJ3   B0WRK5   A0A0N1IFN1   A0A0P5DKF7   A0A0P5CFB7   A0A0P5CMY9   A0A0P5KBG2   A0A151XGD7   A0A0P5HP52   A0A2P8ZKQ4   A0A0P5FVZ1   A0A0N8CGI5   A0A0P5SAB4   A0A0P5KW04   A0A0N8B135   A0A0P5V6X4   A0A0N8CLT5   A0A0P5CN38   A0A0N8A741   A0A0P5I5G2   A0A0P6GIR6   A0A0P6A7S8   A0A0P6G9I9   A0A0N8EK62   A0A0P6FNG6   A0A0P5QGE7   A0A0P6F0D9   A0A0P5PQL1   A0A0P5NZK9   A0A0P5LAR9   A0A0P5V5S4   A0A410GHQ8   E9FSC6   J9K233   A0A0P4XQ78   A0A0A7AS68   A0A0P6BYZ9   A0A158P427   Q17D43   A0A3R7PTA6   A0A0P5YQ47   A0A1B6CH43   A0A1B6DZ36   T1JC73   A0A1B6L4N1   A0A1B6L2P7   A0A1D2ML69  

Pubmed

19121390    28756777    26354079    20798317    24845553    24508170    + More
30249741    20566863    20075255    28648823    18362917    19820115    28004739    23537049    24438588    12364791    25244985    20920257    23761445    29403074    21292972    21347285    17510324    27289101   

EMBL

BABH01004135    BABH01004136    BABH01004137    BABH01004138    KZ149935    PZC77159.1    + More
NWSH01005566    PCG64122.1    RSAL01000093    RVE47906.1    ODYU01000187    SOQ34556.1    KQ459582    KPI99024.1    GL438582    EFN68755.1    LJIG01001320    KRT85620.1    NEVH01024021    PNF17507.1    PNF17508.1    KK852677    KDR18677.1    KK107323    EZA52591.1    QOIP01000002    RLU25880.1    KQ434936    KZC11898.1    GBYB01008659    JAG78426.1    GBYB01008657    JAG78424.1    KZ288405    PBC26181.1    KQ414632    KOC67217.1    GL451188    EFN79822.1    DS235171    EEB12939.1    KQ435922    KOX68527.1    NNAY01002890    OXU20378.1    KQ971348    EFA05649.1    GEZM01033856    JAV84079.1    KQ978901    KYN27579.1    KQ976394    KYM93185.1    KB631749    ERL85768.1    KQ977304    KYN03817.1    LBMM01002389    KMQ94889.1    KQ981880    KYN33955.1    PNF17510.1    ATLV01009630    KE524540    KFB35456.1    APCN01005148    AAAB01008849    ADMH02002024    ETN59939.1    AXCM01001041    AXCN02001759    DS232056    EDS33403.1    KQ460651    KPJ13052.1    GDIP01171909    JAJ51493.1    GDIP01171910    JAJ51492.1    GDIP01171908    JAJ51494.1    GDIQ01188036    JAK63689.1    KQ982174    KYQ59358.1    GDIQ01224474    JAK27251.1    PYGN01000027    PSN57079.1    GDIQ01249576    JAK02149.1    GDIP01133967    JAL69747.1    GDIP01142369    JAL61345.1    GDIQ01186440    JAK65285.1    GDIQ01223179    JAK28546.1    GDIP01103969    JAL99745.1    GDIP01167413    GDIP01149519    GDIP01119167    LRGB01003123    JAL84547.1    KZS04262.1    GDIP01167864    JAJ55538.1    GDIP01176009    JAJ47393.1    GDIQ01223180    JAK28545.1    GDIQ01035049    JAN59688.1    GDIP01038133    JAM65582.1    GDIQ01036651    JAN58086.1    GDIQ01018772    JAN75965.1    GDIQ01056735    JAN38002.1    GDIQ01135660    JAL16066.1    GDIQ01056736    JAN38001.1    GDIQ01135661    JAL16065.1    GDIQ01135662    JAL16064.1    GDIQ01172590    JAK79135.1    GDIP01103968    JAL99746.1    MH172493    QAA95900.1    GL732524    EFX89859.1    ABLF02039796    ABLF02039804    ABLF02039828    GDIP01238308    JAI85093.1    KF906265    AHK05630.1    GDIP01012164    JAM91551.1    ADTU01008287    ADTU01008288    ADTU01008289    ADTU01008290    CH477300    EAT44278.1    QCYY01000894    ROT82022.1    GDIP01054778    JAM48937.1    GEDC01024472    JAS12826.1    GEDC01006379    JAS30919.1    JH432062    GEBQ01021298    JAT18679.1    GEBQ01022051    JAT17926.1    LJIJ01000927    ODM93723.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000000311    UP000235965    + More
UP000027135    UP000053097    UP000279307    UP000076502    UP000242457    UP000053825    UP000005203    UP000008237    UP000009046    UP000053105    UP000002358    UP000215335    UP000007266    UP000075901    UP000078492    UP000078540    UP000075903    UP000030742    UP000078542    UP000036403    UP000078541    UP000075880    UP000030765    UP000075900    UP000076407    UP000075840    UP000075885    UP000076408    UP000075920    UP000000673    UP000075884    UP000069272    UP000075883    UP000075886    UP000002320    UP000053240    UP000075809    UP000245037    UP000076858    UP000000305    UP000007819    UP000005205    UP000008820    UP000283509    UP000094527   

PRIDE

H9JTC7   

Pfam

PF00005   ABC_tran        + More
PF10300   DUF3808
PF00089   Trypsin

Interpro

IPR027417   P-loop_NTPase        + More
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR003593   AAA+_ATPase       
IPR020846   MFS_dom       
IPR026082   ABCA       
IPR011990   TPR-like_helical_dom_sf       
IPR019412   Iml2/TPR_39       
IPR019734   TPR_repeat       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       

SUPFAM

SSF52540   SSF52540        + More
SSF48452   SSF48452       
SSF50494   SSF50494       

Gene 3D

1.25.40.10    

CDD

cd06174  MFS
cd00190  Tryp_SPc

ProteinModelPortal

H9JTC7   A0A2W1BQ17   A0A2A4IY78   A0A3S2LJA8   A0A2H1V1C0   A0A194Q201   + More
E2ACV7   A0A0T6BE97   A0A2J7PMF3   A0A2J7PME9   A0A067R5U3   A0A026WAC0   A0A3L8DZH5   A0A154PKS0   A0A0C9QXZ8   A0A0C9R779   A0A2A3E528   A0A0L7R8K5   A0A088A6H6   E2BWV8   E0VHQ3   A0A0M8ZPX7   K7IRX5   A0A232EPW5   D2A4C6   A0A1Y1ME33   A0A182T3A9   A0A151JMM8   A0A195BY13   A0A182UU28   U4U0E3   A0A195CTJ9   A0A0J7KX87   A0A195F057   A0A2J7PME8   A0A182J101   A0A084VBW2   A0A1Y9HDT4   A0A182XB03   A0A182HX76   A0A1S4H3X5   A0A182PEV1   A0A182YLY5   A0A182W3R0   W5JB00   A0A182NDJ3   A0A182FM13   A0A182MP80   A0A182PZJ3   B0WRK5   A0A0N1IFN1   A0A0P5DKF7   A0A0P5CFB7   A0A0P5CMY9   A0A0P5KBG2   A0A151XGD7   A0A0P5HP52   A0A2P8ZKQ4   A0A0P5FVZ1   A0A0N8CGI5   A0A0P5SAB4   A0A0P5KW04   A0A0N8B135   A0A0P5V6X4   A0A0N8CLT5   A0A0P5CN38   A0A0N8A741   A0A0P5I5G2   A0A0P6GIR6   A0A0P6A7S8   A0A0P6G9I9   A0A0N8EK62   A0A0P6FNG6   A0A0P5QGE7   A0A0P6F0D9   A0A0P5PQL1   A0A0P5NZK9   A0A0P5LAR9   A0A0P5V5S4   A0A410GHQ8   E9FSC6   J9K233   A0A0P4XQ78   A0A0A7AS68   A0A0P6BYZ9   A0A158P427   Q17D43   A0A3R7PTA6   A0A0P5YQ47   A0A1B6CH43   A0A1B6DZ36   T1JC73   A0A1B6L4N1   A0A1B6L2P7   A0A1D2ML69  

PDB

5XJY     E-value=5.3727e-57,     Score=560

KEGG

101744996    K05648 ATP-binding cassette, subfamily A (ABC1), member 5 | (RefSeq) ATP-binding cassette sub-family

GO

GO:0016021   GO:0042626   GO:0005524   GO:0006869   GO:0005319   GO:0043231   GO:0004252   GO:0016887   GO:0005515   GO:0008299   GO:0008152   GO:0016301   GO:0016773   GO:0006418   GO:0000049   GO:0016876  

PANTHER

PTHR19229  

Length:

466

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

86.6952400000001

Exp number, first 60 AAs:

39.80544

Total prob of N-in:

0.40377

POSSIBLE N-term signal

sequence

outside

1  -  4

TMhelix

5  -  24

inside

25  -  35

TMhelix

36  -  53

outside

54  -  62

TMhelix

63  -  85

inside

86  -  110

TMhelix

111  -  133

outside

134  -  466

 

 

Pi

186.34816

Theta

149.921963

Tajima's D

0.766174

CLR

0.031095

CSRT

0.592970351482426

Interpretation

Uncertain