Gene

KWMTBOMO09460

Pre Gene Modal

BGIBMGA012789

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_A_member_5-like_[Bombyx_mori]

Location

Bomo_Chr16(+):1541551-1545322      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.507

CDS

ATGATCAGGGATCCCTACAAGCTGTACGTCATGATCTTCTTGCCTATAATATCCTGTGCCCTCGGTCTTTACATGAAGTCACGACAAATAGTCTTCTTCCGAATGCAGCCACTGACTTTGGGCCCAGATGCCTATTTCAACAAGACCCCCATAGCGCTGCATAGCGAACAGAATACTTTGAGAGAAGACTTCAAAGAATCGCTAGAGATCCTCGGAGCTCACCCTATAGTGGACTTCGATGGAAACTTCTCAAGTCTACTAGACATGGAGAACTTTGGGGCGTTTAGTCTGAAGGAGAGCTTAAATCCATATGGGAAGGTCATGGCGTATTATAACACAACTTACACGCACAGTTTGCCGATAATCATCAATTTGCTGGACAACAGTCTCTATAGGGCCCTAATGTCAGCATCGGGGCTGGAGCACCACTTCAAACCAATAGAAGTGATGGCCCATCCGTTCCAGCAGACAGAGCAGCAGGAAGAGTTCAATTTGGGCAACGTCATCTGCGCTGTGTTCGTCGGCATGATCTTCGCGCTGGTACCAGTGACCCTGGCTGTCGACATCGTCTACGACCGGGAGATCAAAGCAAAGAATCAACTTCGCGTCAACGGCCTCTCGATGAGCATGTACTTCCTCACTTACTTCACGATACTCATCATCATCATGATCATCACTAGCGTCGGCGTCCTGATTCTGGTGAGTCATGGGAATGCTGAGGAAATCAAGGATTTAGTGATTTGA

Protein

MIRDPYKLYVMIFLPIISCALGLYMKSRQIVFFRMQPLTLGPDAYFNKTPIALHSEQNTLREDFKESLEILGAHPIVDFDGNFSSLLDMENFGAFSLKESLNPYGKVMAYYNTTYTHSLPIIINLLDNSLYRALMSASGLEHHFKPIEVMAHPFQQTEQQEEFNLGNVICAVFVGMIFALVPVTLAVDIVYDREIKAKNQLRVNGLSMSMYFLTYFTILIIIMIITSVGVLILVSHGNAEEIKDLVI

Uniprot

H9JTC7   A0A2H1WF16   A0A3S2LJA8   A0A2A4IY78   A0A2W1BQ17   A0A2H1V1C0   + More
A0A194Q201   A0A067R5U3   A0A0L7LNT4   A0A2J7PMF3   A0A2J7PME9   D2A4C6   A0A1Y1ME33   A0A2P8ZKQ4   A0A0J7KX87   A0A2A3E528   A0A0T6BE97   A0A088A6H6   N6TSQ4   E9IK73   A0A0M8ZPX7   U4U0E3   F4WYL0   A0A195F057   A0A026WAC0   A0A151JMM8   A0A158P427   A0A195BY13   A0A151XGD7   A0A0L7R8K5   E2BWV8   A0A3L8DZH5   A0A195CTJ9   A0A0U9HY77   B0WRK5   Q17D43   A0A0C9R779   A0A0C9QXZ8   A0A232EPW5   A0A154PKS0   K7IRX5   A0A2S2PMD0   A0A2H8TV16   J9K233   A0A2S2Q7R5   A0A2S2QV61   A0A0A7AS68   A0A1B6D564   A0A1B6CH43   A0A1B6DCT2   A0A1B6DZ36   A0A1B6HSL0   A0A1B6IV27   A0A1B6L4N1   A0A1B6L2P7   A0A0P5Q0E4   A0A0P5NHC6   A0A0P5SAB4   A0A0N7ZT59   A0A0N8EK62   A0A0P5SCK2   A0A0P5FVZ1   A0A0P5M946   A0A0P5NEX5   A0A0P6A7S8   A0A0N8A741   A0A0N8CGI5   A0A0P5QGE7   A0A0P5V6X4   A0A0P6FNG6   A0A0N8AU30   A0A0P6BYZ9   A0A0P6G9I9   A0A0P5DKF7   A0A0P5LAR9  

Pubmed

19121390    28756777    26354079    24845553    26227816    18362917    + More
19820115    28004739    29403074    23537049    21282665    21719571    24508170    21347285    20798317    30249741    17510324    28648823    20075255   

EMBL

BABH01004135    BABH01004136    BABH01004137    BABH01004138    ODYU01008243    SOQ51663.1    + More
RSAL01000093    RVE47906.1    NWSH01005566    PCG64122.1    KZ149935    PZC77159.1    ODYU01000187    SOQ34556.1    KQ459582    KPI99024.1    KK852677    KDR18677.1    JTDY01000471    KOB77024.1    NEVH01024021    PNF17507.1    PNF17508.1    KQ971348    EFA05649.1    GEZM01033856    JAV84079.1    PYGN01000027    PSN57079.1    LBMM01002389    KMQ94889.1    KZ288405    PBC26181.1    LJIG01001320    KRT85620.1    APGK01053503    APGK01053504    KB741224    ENN72300.1    GL763924    EFZ19007.1    KQ435922    KOX68527.1    KB631749    ERL85768.1    GL888453    EGI60698.1    KQ981880    KYN33955.1    KK107323    EZA52591.1    KQ978901    KYN27579.1    ADTU01008287    ADTU01008288    ADTU01008289    ADTU01008290    KQ976394    KYM93185.1    KQ982174    KYQ59358.1    KQ414632    KOC67217.1    GL451188    EFN79822.1    QOIP01000002    RLU25880.1    KQ977304    KYN03817.1    GARF01000030    JAC88913.1    DS232056    EDS33403.1    CH477300    EAT44278.1    GBYB01008657    JAG78424.1    GBYB01008659    JAG78426.1    NNAY01002890    OXU20378.1    KQ434936    KZC11898.1    GGMR01017992    MBY30611.1    GFXV01006300    MBW18105.1    ABLF02039796    ABLF02039804    ABLF02039828    GGMS01004566    MBY73769.1    GGMS01011819    MBY81022.1    KF906265    AHK05630.1    GEDC01016457    JAS20841.1    GEDC01024472    JAS12826.1    GEDC01013819    JAS23479.1    GEDC01006379    JAS30919.1    GECU01030039    JAS77667.1    GECU01016973    JAS90733.1    GEBQ01021298    JAT18679.1    GEBQ01022051    JAT17926.1    GDIQ01121512    JAL30214.1    GDIQ01145258    JAL06468.1    GDIP01142369    JAL61345.1    GDIP01215065    JAJ08337.1    GDIQ01018772    JAN75965.1    GDIQ01106220    JAL45506.1    GDIQ01249576    JAK02149.1    GDIQ01158895    JAK92830.1    GDIQ01146565    JAL05161.1    GDIP01038133    JAM65582.1    GDIP01176009    JAJ47393.1    GDIP01133967    JAL69747.1    GDIQ01135660    JAL16066.1    GDIP01103969    JAL99745.1    GDIQ01056735    JAN38002.1    GDIQ01242819    JAK08906.1    GDIP01012164    JAM91551.1    GDIQ01036651    JAN58086.1    GDIP01171909    JAJ51493.1    GDIQ01172590    JAK79135.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000027135    UP000037510    + More
UP000235965    UP000007266    UP000245037    UP000036403    UP000242457    UP000005203    UP000019118    UP000053105    UP000030742    UP000007755    UP000078541    UP000053097    UP000078492    UP000005205    UP000078540    UP000075809    UP000053825    UP000008237    UP000279307    UP000078542    UP000002320    UP000008820    UP000215335    UP000076502    UP000002358    UP000007819   

PRIDE

H9JTC7   

Pfam

PF00005   ABC_tran

Interpro

IPR027417   P-loop_NTPase        + More
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR003593   AAA+_ATPase       
IPR020846   MFS_dom       
IPR026082   ABCA       
IPR023298   ATPase_P-typ_TM_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF81665   SSF81665       

CDD

cd06174  MFS

ProteinModelPortal

H9JTC7   A0A2H1WF16   A0A3S2LJA8   A0A2A4IY78   A0A2W1BQ17   A0A2H1V1C0   + More
A0A194Q201   A0A067R5U3   A0A0L7LNT4   A0A2J7PMF3   A0A2J7PME9   D2A4C6   A0A1Y1ME33   A0A2P8ZKQ4   A0A0J7KX87   A0A2A3E528   A0A0T6BE97   A0A088A6H6   N6TSQ4   E9IK73   A0A0M8ZPX7   U4U0E3   F4WYL0   A0A195F057   A0A026WAC0   A0A151JMM8   A0A158P427   A0A195BY13   A0A151XGD7   A0A0L7R8K5   E2BWV8   A0A3L8DZH5   A0A195CTJ9   A0A0U9HY77   B0WRK5   Q17D43   A0A0C9R779   A0A0C9QXZ8   A0A232EPW5   A0A154PKS0   K7IRX5   A0A2S2PMD0   A0A2H8TV16   J9K233   A0A2S2Q7R5   A0A2S2QV61   A0A0A7AS68   A0A1B6D564   A0A1B6CH43   A0A1B6DCT2   A0A1B6DZ36   A0A1B6HSL0   A0A1B6IV27   A0A1B6L4N1   A0A1B6L2P7   A0A0P5Q0E4   A0A0P5NHC6   A0A0P5SAB4   A0A0N7ZT59   A0A0N8EK62   A0A0P5SCK2   A0A0P5FVZ1   A0A0P5M946   A0A0P5NEX5   A0A0P6A7S8   A0A0N8A741   A0A0N8CGI5   A0A0P5QGE7   A0A0P5V6X4   A0A0P6FNG6   A0A0N8AU30   A0A0P6BYZ9   A0A0P6G9I9   A0A0P5DKF7   A0A0P5LAR9  

PDB

5XJY     E-value=0.00905856,     Score=89

KEGG

101744996    K05648 ATP-binding cassette, subfamily A (ABC1), member 5 | (RefSeq) ATP-binding cassette sub-family

GO

GO:0016021   GO:0042626   GO:0005524   GO:0006869   GO:0005319   GO:0043231  

PANTHER

PTHR19229  

Length:

247

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

67.81371

Exp number, first 60 AAs:

19.2783

Total prob of N-in:

0.42061

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  25

outside

26  -  168

TMhelix

169  -  191

inside

192  -  211

TMhelix

212  -  234

outside

235  -  247

 

 

Pi

187.025426

Theta

145.370813

Tajima's D

0.965433

CLR

0.122057

CSRT

0.651417429128544

Interpretation

Uncertain