SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09457
Pre Gene Modal
BGIBMGA012788
Annotation
trypsin-like_serine_proteinase_T26_[Ostrinia_nubilalis]
Location in the cell
Extracellular   Reliability : 2.845
 

Sequence

CDS
ATGAATTGGGTCTTCCTTCGAGGTGTGACCAACGCGTTCTGCTCAGAAATTTTCGTAATCAACAATATCGTTCAGGATTCCACCATCTGCGCTTCAGGATACAACGTGACCAGCCAGTCTACCTGCCAAGGTGACAGCGGCGGAGGACTGACCGTTGTTGACGTTGACGGACAAGTGTCACAAGTTGGAATTTCGTCCTTCGTTTCCAGTACTGGTTGTCACACTGATTACCCTGCAGGTTTCATTCGGCCTGGTCATTACCACGACTGGTACTTAGAGGTCACCGGAATCGACTTCGACTGGAAACCCGAAACAATCGAACAACAATGA
Protein
MNWVFLRGVTNAFCSEIFVINNIVQDSTICASGYNVTSQSTCQGDSGGGLTVVDVDGQVSQVGISSFVSSTGCHTDYPAGFIRPGHYHDWYLEVTGIDFDWKPETIEQQ

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
GDQN01001948    JAT89106.1    GDQN01005223    JAT85831.1    EU673453    ACI45416.1    + More
EU673452    ACI45415.1    EF600058    ABU98623.1    KZ149935    PZC77162.1    JN252040    AFM28253.1    RSAL01000093    RVE47905.1    NWSH01000207    PCG78410.1    PCG78414.1    PCG78412.1    PCG78411.1    PCG78413.1    PCG78415.1    KQ459582    KPI99023.1    MH201547    QAR48640.1    AB026735    BAA77401.1    HM990180    ADT80828.1    ODYU01006083    SOQ47618.1    ODYU01006082    SOQ47617.1    BABH01004141    BABH01004139    BABH01004140    KQ460651    KPJ13054.1    AGBW02007651    OWR55096.1    ODYU01001143    SOQ36938.1    FJ205435    ACR16001.2    PCG78408.1    JQ429439    AFW03964.1    NWSH01000176    PCG78737.1    PCG78736.1    EF531628    ABR88239.1    KM360194    AKH49610.1    Y12272    CAA72951.1    JN252043    AFM28256.1    AF309500    AAK06410.1    GBRD01018206    JAG47621.1    RVE47909.1    KPI99028.1    PZC77163.1    PZC77160.1    FJ205416    ACR15984.1    ODYU01005353    SOQ46109.1    PCG78407.1    SOQ36937.1    AY829820    AAV91434.2    KP690084    ALO61086.1    BABH01004142    OWR55112.1    FJ205398    ACR15967.2    BABH01004119    BABH01004120    BABH01004121    BABH01004122    KQ459700    KPJ20347.1    KPI98932.1    KX951431    ARR75599.1    AGBW02009787    OWR49920.1    KPJ13048.1    ODYU01004804    SOQ45062.1    ODYU01003737    SOQ42892.1    GDQN01010016    JAT81038.1    BABH01004123    BABH01004124    ODYU01007484    SOQ50292.1    KP690083    ALO61085.1    RSAL01000071    RVE49104.1    ODYU01005031    SOQ45511.1    ODYU01004626    SOQ44697.1    AY618894    AAV33657.1    PZC77161.1    PCG78733.1    FJ205411    ACR15979.2    AY603563    AAU06478.1    BABH01004171    BABH01004172    AY603564    AAU06479.1    ODYU01011198    SOQ56783.1    NWSH01000261    PCG77915.1    ATLV01020656    KE525304    KFB45482.1    JXUM01014499    KQ560405    KXJ82578.1    ATLV01018958    KE525256    KFB43479.1    AJVK01003435    AY995188    AAX94742.1    KPI99004.1    DS233463    EDS30111.1    DS232644    EDS44379.1    AXCM01001005    JXUM01039418    KQ561203    KXJ79369.1    UFQS01005099    UFQT01002868    UFQT01005099    SSX16706.1    SSX34190.1    CH477603    EAT38417.1    AXCN02001863    JXUM01046076    KQ561462    KXJ78498.1    APCN01005255   
Pfam
PF00089   Trypsin        + More
PF07714   Pkinase_Tyr
PF00595   PDZ
PF00412   LIM
PF07808   RED_N
PF07807   RED_C
Interpro
IPR001314   Peptidase_S1A        + More
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR033116   TRYPSIN_SER       
IPR036034   PDZ_sf       
IPR001478   PDZ       
IPR017441   Protein_kinase_ATP_BS       
IPR001781   Znf_LIM       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
IPR012916   RED_N       
IPR012492   RED_C       
IPR039896   Red-like       
SUPFAM
SSF50494   SSF50494        + More
SSF50156   SSF50156       
SSF56112   SSF56112       
PDB
2HLC     E-value=1.69036e-05,     Score=108

Ontologies

Topology

Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.14885
Exp number, first 60 AAs:
0.14783
Total prob of N-in:
0.17824
outside
1  -  109
 
 

Population Genetic Test Statistics

Pi
131.868439
Theta
124.203535
Tajima's D
0.398176
CLR
0.616431
CSRT
0.48047597620119
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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