SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09452
Pre Gene Modal
BGIBMGA012786
Annotation
serine_protease_3_[Lonomia_obliqua]
Location in the cell
Extracellular   Reliability : 1.71 PlasmaMembrane   Reliability : 2.195
 

Sequence

CDS
ATGTCGTTGCTAGGTGTGGTCGCGTTGTTAATACTGGTTGGAACATCGGTTTCAGCTGAGCAATCGCTTGCTGAAAAAGCCGGTTCGAGAATCGTGTCAGGATGGGAAGCCCGCGATGGGCAGTTCCCTTACATGCTGTACCTCCGTTCCGTGGATGTCCACGGGCGCATTTCCGCCTGCGGGGGCTCCATCATCCACCACAAGTGGGGCATGACGTCTGCTAGATGCATCGCCAGACGCGTAGTTATTATGCTCTGGGCGGGAATGGTGGACCTGAGCCGGCCCCGCGTCTACATCGAGACCGCTTCGTACTTCACGGCCCCCGAGTACATGGATGACCTGCATCAACTCACCCAACCGCACGACATCGGGCTGGTCGGGTTCAATCGGCATCTTGAATACAGTCAATTCATTCAGCCCATCAGATTGATGCGTTCCGCTGATATGAACAAGGAGTACGCGGGTGTGAAGATGACGACCAGTGGCTGGGGTACAGACTGGACGAACGGGAACCCTACGCAAATATTAAACTTCGTGCACCTGAGGGGAGTGAATAACATCGTGTGCGCGCTTTGGTTACAAAGCTCGTTCCACGTGAGGGTATCCACCATTTGCGCCGGTCCATACAACGTTACGAGTCAAGGGATATGTTCGGGCGACAGCGGCGTGCCCCTGACTCTGTTGGAGGAGGATGGCCAGCTCACCCAGGTCGGAGTCGGCTCGTTCGTCTCATCGTTCGGGTGCCACGTCGGTCTACCTAATGCGTTTGTGAGGCCGGGCCATTATCACGACTGGATCCGCGCGGTCACCGGCATCCAGTTCGACTGGTGA
Protein
MSLLGVVALLILVGTSVSAEQSLAEKAGSRIVSGWEARDGQFPYMLYLRSVDVHGRISACGGSIIHHKWGMTSARCIARRVVIMLWAGMVDLSRPRVYIETASYFTAPEYMDDLHQLTQPHDIGLVGFNRHLEYSQFIQPIRLMRSADMNKEYAGVKMTTSGWGTDWTNGNPTQILNFVHLRGVNNIVCALWLQSSFHVRVSTICAGPYNVTSQGICSGDSGVPLTLLEEDGQLTQVGVGSFVSSFGCHVGLPNAFVRPGHYHDWIRAVTGIQFDW

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
AY829820    AAV91434.2    ODYU01004804    SOQ45062.1    NWSH01000207    PCG78407.1    + More
ODYU01005031    SOQ45511.1    AB026735    BAA77401.1    BABH01004141    GDQN01005223    JAT85831.1    BABH01004139    BABH01004140    GDQN01001948    JAT89106.1    KQ459582    KPI99023.1    RSAL01000093    RVE47905.1    HM990180    ADT80828.1    KZ149935    PZC77163.1    AGBW02007651    OWR55096.1    MH201547    QAR48640.1    PCG78408.1    JN252040    AFM28253.1    PCG78412.1    PCG78413.1    PCG78415.1    PCG78411.1    PCG78410.1    PCG78414.1    EF600058    ABU98623.1    FJ205435    ACR16001.2    EU673453    ACI45416.1    PZC77162.1    EU673452    ACI45415.1    JN252043    AFM28256.1    EF531628    ABR88239.1    GBRD01018206    JAG47621.1    PZC77160.1    RVE47909.1    JQ429439    AFW03964.1    AF309500    AAK06410.1    FJ205416    ACR15984.1    NWSH01000176    PCG78736.1    KP690084    ALO61086.1    BABH01004119    BABH01004120    BABH01004121    BABH01004122    ODYU01001143    SOQ36937.1    OWR55112.1    PCG78737.1    FJ205398    ACR15967.2    AY618894    AAV33657.1    KQ460651    KPJ13048.1    KPI99028.1    GDQN01010016    JAT81038.1    AGBW02009787    OWR49920.1    PCG78733.1    RSAL01000071    RVE49104.1    ODYU01003737    SOQ42892.1    Y12272    CAA72951.1    PZC77161.1    KQ459700    KPJ20347.1    KPI98932.1    KM360194    AKH49610.1    BABH01004171    BABH01004172    JN252039    AFM28252.1    FJ205411    ACR15979.2    ODYU01007484    SOQ50292.1    KP690083    ALO61085.1    NWSH01000261    PCG77915.1    ODYU01004626    SOQ44697.1    KX951431    ARR75599.1    ODYU01005353    SOQ46109.1    GANO01002186    JAB57685.1    AY995188    AAX94742.1    GFDL01004648    JAV30397.1    GFDL01004647    JAV30398.1    AXCM01001005    JXUM01014499    KQ560405    KXJ82578.1    AXCM01000074    AXCM01000418    CVRI01000022    CRK92071.1    DS231866    EDS40495.1    ATLV01018958    KE525256    KFB43479.1    AAAB01008960    EAA11303.4    ATLV01020656    KE525304    KFB45482.1    AXCN02001904    APCN01005255    AAAB01008980    HQ878386    ADY17978.1    EAU76138.2    APCN01005872    DS231893    EDS44176.1   
Pfam
PF00089   Trypsin        + More
PF07714   Pkinase_Tyr
PF00595   PDZ
PF00412   LIM
PF07808   RED_N
PF07807   RED_C
Interpro
IPR001254   Trypsin_dom        + More
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR033116   TRYPSIN_SER       
IPR018114   TRYPSIN_HIS       
IPR036034   PDZ_sf       
IPR001478   PDZ       
IPR017441   Protein_kinase_ATP_BS       
IPR001781   Znf_LIM       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
IPR012916   RED_N       
IPR012492   RED_C       
IPR039896   Red-like       
SUPFAM
SSF50494   SSF50494        + More
SSF50156   SSF50156       
SSF56112   SSF56112       
PDB
2HLC     E-value=1.57223e-25,     Score=286

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.997694
 
 
Length:
276
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.996289999999999
Exp number, first 60 AAs:
0.8962
Total prob of N-in:
0.04515
outside
1  -  276
 
 

Population Genetic Test Statistics

Pi
218.852969
Theta
182.243977
Tajima's D
1.717323
CLR
0.23867
CSRT
0.835958202089895
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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