Gene

KWMTBOMO09444  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012784

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_two_pore_calcium_channel_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr16(+):1310891-1314325      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.228

CDS

ATGCTGCAGAAACTATTAATGTTCCTGATCGAAGCGGCCCTGCGGATGATGGCCTCCGGACTCGCCGCGTACTTGGAGAGCGGCTGGAATGTCTTCGATCTCAGTGTTACGTTATTAGCATTGATGGGTGCGGTGTTGCTGTCGATCGCTCCTGGGCTATTCATCGTTGTAATATTTAGGCCTCTCAGGTTAATGCGTCTCTACAAGCTGAAGAAGCGGTACCGTGATGTCTTCGGAACTCTAGTGCTCCTGTCTCCCCTGATGTCATCGGCTGGCTGCGTGATGCTGGTCATGTACTACTTCTTCTCGATCATCGGGATGGAGCTCTTCGCTTCTTATCAACTAAAGAACTGTTGTGTGAATACAACGGTGGAAGACTTCTACAAGTACTCGTCCAATAGCTCGACCGCCCTCGGCTACTATTACCTGAACAACTTCGAGAACCTAGTCACGAGTGGATGTCGCGGGACAGTTCACCAGAATATATTTTATGGTGTTCTATCTGTTCACGATGGTGGTGTTGACCATCGTGGTGGCGAGCGTACTGGAGGCATTCCGATTCAGGATACAGTACAAGAGGAGCACAACTAA

Protein

MLQKLLMFLIEAALRMMASGLAAYLESGWNVFDLSVTLLALMGAVLLSIAPGLFIVVIFRPLRLMRLYKLKKRYRDVFGTLVLLSPLMSSAGCVMLVMYYFFSIIGMELFASYQLKNCCVNTTVEDFYKYSSNSSTALGYYYLNNFENLVTSGCRGTVHQNIFYGVLSVHDGGVDHRGGERTGGIPIQDTVQEEHN

Uniprot

H9JTC2   A0A194R2B4   A0A194Q1Z0   A0A437BBZ4   A0A1E1WTZ1   A0A2H1VIA3   + More
A0A212FMX6   A0A2A4K3C1   A0A2A4K2Z5   A0A2A4K419   A0A067QPX2   A0A1Y1NBW0   A0A1Y1NIA3   A0A1Y1NBW7   A0A1Y1NFP5   N6TYV1   U4UR78   D2A6B3   A0A0C9R235   A0A154PN53   A0A0C9QCA4   A0A1W4WI41   A0A1W4WSY0   A0A2J7PTU8   A0A2J7PTU6   E2BLT9   A0A026WWZ4   A0A0J7L7X6   E2AQ73   E9IEK8   V9I9W5   A0A2A3EGQ6   K7IN16   A0A232F1S9   A0A0T6BI11   A0A1B6MUT5   E0VHQ9   A0A1B6IRK8   A0A151WSM0   A0A195BVH7   A0A158NEU4   F4WJE8   A0A2S2PR56   J9K983   A0A195FRV6   A0A2S2QQC8   A0A1B6DU32   A0A3R7QF20   A0A210Q0H2   A0A0K2T2J7   W4Y9B5   A0A0P5B0H1   V3ZK60   T1EZP0   B8PXJ8   D1J6X7   A0A3S1A522   A0A0P5APD6   A0A0P5KUC7   A0A0P4WRQ5   A0A0P5WZ53   A0A0P5WYA6   A0A0P5LGN1   A0A0P5ILN5   A0A0P4ZEA0   A0A0P5A5V7   A0A0P5LE06   A0A0P5M5U4   A0A0N8B6F7   A0A0P5NLE8   A0A0P6GTU1   A0A0P5WQ39   A0A0N8AQ54   A0A0P5BRX1   A0A0P5W0M2   A0A0P5V3X6   A0A0P5TS73   A0A0P5WGR0   A0A0P6DAA0   A0A0P4XWY9   A0A0P5S0P0   A0A0N8CCU7   A0A0N8DMW7   A0A0P5UXL4   A0A0P5K371   A0A0P6I5P3   A0A0P5DE72   A0A0P5A761   A0A0P5BDU6   A0A0P5QI87   A0A0N7ZVX8   A0A2L2Y828   A0A0L8IF77   A0A0L8IFE0   E9GLT0   R7UCL2  

Pubmed

19121390    26354079    22118469    24845553    28004739    23537049    + More
18362917    19820115    20798317    24508170    30249741    21282665    20075255    28648823    20566863    21347285    21719571    28812685    23254933    26561354    21292972   

EMBL

BABH01004153    KQ460878    KPJ11659.1    KQ459582    KPI99014.1    RSAL01000093    + More
RVE47915.1    GDQN01000647    JAT90407.1    ODYU01002714    SOQ40567.1    AGBW02007651    OWR55102.1    NWSH01000207    PCG78418.1    PCG78419.1    PCG78420.1    KK853093    KDR11510.1    GEZM01007057    GEZM01007056    JAV95442.1    GEZM01007058    GEZM01007053    JAV95447.1    GEZM01007055    JAV95444.1    GEZM01007054    JAV95445.1    APGK01055716    APGK01055717    KB741269    ENN71457.1    KB632330    ERL92570.1    KQ971347    EFA05489.1    GBYB01000921    JAG70688.1    KQ434972    KZC12738.1    GBYB01000919    JAG70686.1    NEVH01021221    PNF19757.1    PNF19755.1    GL449036    EFN83423.1    KK107078    QOIP01000011    EZA60358.1    RLU16920.1    LBMM01000361    KMQ99399.1    GL441701    EFN64407.1    GL762647    EFZ20995.1    JR036333    JR036334    JR036335    AEY57082.1    AEY57083.1    AEY57084.1    KZ288254    PBC30888.1    NNAY01001310    OXU24398.1    LJIG01000129    KRT86811.1    GEBQ01000325    JAT39652.1    DS235171    EEB12945.1    GECU01018154    JAS89552.1    KQ982769    KYQ50870.1    KQ976401    KYM92587.1    ADTU01013171    GL888182    EGI65726.1    GGMR01019266    MBY31885.1    ABLF02033059    ABLF02033063    KQ981335    KYN42644.1    GGMS01010776    MBY79979.1    GEDC01008120    JAS29178.1    QCYY01001612    ROT76757.1    NEDP02005302    OWF42253.1    HACA01002295    CDW19656.1    AAGJ04004622    AAGJ04004623    AAGJ04004624    AAGJ04004625    GDIP01191672    JAJ31730.1    KB202237    ESO91688.1    AMQM01002830    KB095905    ESO09870.1    EU287986    ABZ79726.1    FN598566    CBI63263.1    RQTK01000266    RUS82903.1    GDIP01196376    JAJ27026.1    GDIQ01180054    JAK71671.1    GDIP01253108    JAI70293.1    GDIP01079833    JAM23882.1    GDIP01079834    JAM23881.1    GDIQ01169856    JAK81869.1    GDIQ01213945    JAK37780.1    GDIP01218171    JAJ05231.1    GDIP01216023    JAJ07379.1    GDIQ01196295    JAK55430.1    GDIQ01209199    GDIQ01201697    GDIQ01184354    GDIQ01084837    JAK67371.1    GDIQ01253826    GDIQ01252532    GDIQ01251187    GDIQ01208203    GDIQ01206598    GDIQ01205148    GDIP01091575    LRGB01000944    JAK43522.1    JAM12140.1    KZS14480.1    GDIQ01269623    GDIQ01267299    GDIQ01199098    GDIQ01184353    GDIQ01178604    GDIQ01165219    GDIQ01140626    GDIQ01129878    GDIQ01036152    JAL11100.1    GDIQ01029761    JAN64976.1    GDIP01083883    JAM19832.1    GDIQ01253827    GDIQ01252533    GDIQ01251188    GDIQ01248042    GDIQ01208204    GDIQ01206599    GDIQ01205149    GDIQ01203451    JAJ97897.1    GDIP01181671    JAJ41731.1    GDIP01092541    JAM11174.1    GDIP01107393    JAL96321.1    GDIP01122333    JAL81381.1    GDIP01086691    JAM17024.1    GDIQ01081934    JAN12803.1    GDIP01235565    JAI87836.1    GDIQ01192649    GDIQ01094534    JAL57192.1    GDIQ01092283    JAL59443.1    GDIP01018111    JAM85604.1    GDIP01107394    JAL96320.1    GDIQ01191592    JAK60133.1    GDIQ01009066    JAN85671.1    GDIP01157679    JAJ65723.1    GDIP01203162    JAJ20240.1    GDIP01185927    JAJ37475.1    GDIQ01123629    JAL28097.1    GDIP01207313    JAJ16089.1    IAAA01012313    IAAA01012314    IAAA01012315    IAAA01012316    LAA04167.1    KQ415846    KOG00142.1    KOG00143.1    GL732551    EFX79631.1    AMQN01001457    KB302615    ELU04120.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000007151    UP000218220    + More
UP000027135    UP000019118    UP000030742    UP000007266    UP000076502    UP000192223    UP000235965    UP000008237    UP000053097    UP000279307    UP000036403    UP000000311    UP000242457    UP000002358    UP000215335    UP000009046    UP000075809    UP000078540    UP000005205    UP000007755    UP000007819    UP000078541    UP000283509    UP000242188    UP000007110    UP000030746    UP000015101    UP000271974    UP000076858    UP000053454    UP000000305    UP000014760   

PRIDE

H9JTC2   

Pfam

PF00520   Ion_trans

Interpro

IPR005821   Ion_trans_dom        + More
IPR028801   TPC1       
IPR027359   Volt_channel_dom_sf       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       

SUPFAM

SSF47473   SSF47473       

Gene 3D

1.20.120.350    

ProteinModelPortal

H9JTC2   A0A194R2B4   A0A194Q1Z0   A0A437BBZ4   A0A1E1WTZ1   A0A2H1VIA3   + More
A0A212FMX6   A0A2A4K3C1   A0A2A4K2Z5   A0A2A4K419   A0A067QPX2   A0A1Y1NBW0   A0A1Y1NIA3   A0A1Y1NBW7   A0A1Y1NFP5   N6TYV1   U4UR78   D2A6B3   A0A0C9R235   A0A154PN53   A0A0C9QCA4   A0A1W4WI41   A0A1W4WSY0   A0A2J7PTU8   A0A2J7PTU6   E2BLT9   A0A026WWZ4   A0A0J7L7X6   E2AQ73   E9IEK8   V9I9W5   A0A2A3EGQ6   K7IN16   A0A232F1S9   A0A0T6BI11   A0A1B6MUT5   E0VHQ9   A0A1B6IRK8   A0A151WSM0   A0A195BVH7   A0A158NEU4   F4WJE8   A0A2S2PR56   J9K983   A0A195FRV6   A0A2S2QQC8   A0A1B6DU32   A0A3R7QF20   A0A210Q0H2   A0A0K2T2J7   W4Y9B5   A0A0P5B0H1   V3ZK60   T1EZP0   B8PXJ8   D1J6X7   A0A3S1A522   A0A0P5APD6   A0A0P5KUC7   A0A0P4WRQ5   A0A0P5WZ53   A0A0P5WYA6   A0A0P5LGN1   A0A0P5ILN5   A0A0P4ZEA0   A0A0P5A5V7   A0A0P5LE06   A0A0P5M5U4   A0A0N8B6F7   A0A0P5NLE8   A0A0P6GTU1   A0A0P5WQ39   A0A0N8AQ54   A0A0P5BRX1   A0A0P5W0M2   A0A0P5V3X6   A0A0P5TS73   A0A0P5WGR0   A0A0P6DAA0   A0A0P4XWY9   A0A0P5S0P0   A0A0N8CCU7   A0A0N8DMW7   A0A0P5UXL4   A0A0P5K371   A0A0P6I5P3   A0A0P5DE72   A0A0P5A761   A0A0P5BDU6   A0A0P5QI87   A0A0N7ZVX8   A0A2L2Y828   A0A0L8IF77   A0A0L8IFE0   E9GLT0   R7UCL2  

PDB

6C9A     E-value=1.88583e-22,     Score=258

KEGG

101739181    K16896 two pore calcium channel protein 1 | (RefSeq) two pore calcium channel protein 1-like

GO

GO:0016021   GO:0005245   GO:0005765   GO:0010008   GO:0072345   GO:0005509   GO:0005216   GO:0006811   GO:0016020   GO:0006412   GO:0004672   GO:0005524   GO:0006468   GO:0006418   GO:0000049   GO:0016876   GO:0055085  

PANTHER

PTHR46474  

Length:

196

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

61.45153

Exp number, first 60 AAs:

38.15891

Total prob of N-in:

0.73803

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  36

TMhelix

37  -  59

inside

60  -  79

TMhelix

80  -  102

outside

103  -  196

 

 

Pi

230.586913

Theta

158.328199

Tajima's D

1.318637

CLR

0.097986

CSRT

0.742862856857157

Interpretation

Uncertain