Gene

KWMTBOMO09443  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012784

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_two_pore_calcium_channel_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr16(+):1288561-1309488      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.578

CDS

ATGGGCAGTCGCTCGTCCCTCCACACGGGCCTCCACATGTCCGAAGACGAGCATTGGGAGATGAACTACCACGAGGCAGCTATTTATTTAGAGGAAGGTCAAAACAACGAAAAGTTCGACTCCCATCCATCTAGTCCCGAAGAGTTACCAGCCTACCTCAGGGTACACAACCCCTGGTACCATGGCCTCGATCTACTAGCTTCATTAGTTTTAATATTATTGGCATTCACCGAAGACCCAGCCGTTCCCACATTTGAGCTTCCAGTATGGGCACACGGTACTATAGAATTAATGGCGTTAACTGTGATCGGAATAGAGCTACATCTGAAACTAAAATGGATCGGATGGAGCACCATACTTAAACACAAGAGGACCATGTTAAAGGGTATAACCCTGCTAATAATGGTGCTTGAAGCTGTGGTAGTGCTATGCCGGCAATCCTCACACTTCAGAGTAACGAGGGCGTTGCGTCCTATCTTCTTAGTGGACACGCGGCACTGCGGCGGAGTACGGAGGTTCATTAGACAAATTCTGCAATCGTTACCACCGATTATTGATATGTTAGGTCTATTAATGTTCTTCGTGGCGACTTACTCGCTTTTAGGATTCTATTTATTCTCTGAGCACGTAGACAATGGACACTTCCAGACGCTTAGTGACTCATTCGTTAGTATGTTTGTTTTGCTGACTTCGGCAAACTTCCCAGATGTGATGATGCCATCTTATGCCAAGTCGAAGTGGTACGCACTATTCTTCATCTTGTACATAATCACCGTTCTCTACGTCTTGATGAATTTGATGTTGGCCGTTGTTTACGAGACCTTCACCCGGATCGAACGCGAGAAATGTCGCGCGCTGTTACTGCATCGCCGCGGCGCTACACGTCACGCCTTCCGACTGCTTGTCTCACGACGAGCGCCTCACGCAGTCCGGTTGAGACACTTCGCGGGACTCATGAGACATTACGCGCCGCATTACAATGGTCTAGACGTGTACCTAATGTTCAAGCACCTGAACCAGACCGGCACAGGGGGTCTCTCCCGGGCGGAGTTCGCGAACGTGTACGATGTGTTCGCACTGCGCTGGGCGGCGCAGACCGCGCGCGCTCCGTGGTACGCCGCGTCGCCGCTCGAGCCCATCGCCCGCGCCGCCGCCGCCGCCGTGCACTGGAAACACTTTGAGCATCTTGTCTGTAAGTCCACAGATTACTAA

Protein

MGSRSSLHTGLHMSEDEHWEMNYHEAAIYLEEGQNNEKFDSHPSSPEELPAYLRVHNPWYHGLDLLASLVLILLAFTEDPAVPTFELPVWAHGTIELMALTVIGIELHLKLKWIGWSTILKHKRTMLKGITLLIMVLEAVVVLCRQSSHFRVTRALRPIFLVDTRHCGGVRRFIRQILQSLPPIIDMLGLLMFFVATYSLLGFYLFSEHVDNGHFQTLSDSFVSMFVLLTSANFPDVMMPSYAKSKWYALFFILYIITVLYVLMNLMLAVVYETFTRIEREKCRALLLHRRGATRHAFRLLVSRRAPHAVRLRHFAGLMRHYAPHYNGLDVYLMFKHLNQTGTGGLSRAEFANVYDVFALRWAAQTARAPWYAASPLEPIARAAAAAVHWKHFEHLVCKSTDY

Uniprot

A0A212FMX6   A0A194R2B4   A0A437BBZ4   A0A2H1VIA3   A0A2A4K419   A0A2A4K2Z5   + More
A0A2A4K3C1   A0A0L7LMU2   A0A194Q1Z0   A0A2J7PTT9   A0A067QPX2   A0A2P8Z326   A0A2J7PTU8   A0A2J7PTU6   A0A1B6DU32   A0A0C9QCA4   A0A1B6MEL7   D2A6B3   A0A1B6DE94   K7IN16   A0A232F1S9   A0A088A8Q4   A0A2A3EGQ6   A0A1Y1NBW7   A0A1Y1NFP5   A0A310SA12   E0VHQ9   A0A154PN53   E9IEK8   A0A1W4WI41   A0A026WWZ4   E2AQ73   A0A1W4WSY0   A0A158NEU4   A0A195BVH7   E2BLT9   A0A195FRV6   A0A0J7L7X6   U4UR78   A0A151WSM0   F4WJE8   N6TYV1   A0A2S2QQC8   J9K983   A0A0T6BI11   A0A1B6IRK8   A0A0P5LQC5   A0A0P5W0M2   A0A0P6DAA0   A0A0P5K371   A0A0P5A761   A0A0N7ZVX8   A0A0P5TS73   A0A0P4XWY9   A0A0P5BRX1   A0A0N8B6F7   A0A0P5A5V7   A0A0P4ZEA0   A0A0P5WQ39   A0A0N8AQ54   A0A0P5S0P0   A0A0P5M5U4   A0A0P5NLE8   A0A0P5BDU6   A0A0P5LE06   A0A0P5WGR0   A0A0P5V3X6   A0A0P5QI87   A0A0P5DE72   A0A0P6I5P3   A0A0N8CCU7   E9GLT0   A0A0N8DMW7   A0A0P6GTU1   A0A0P5UXL4   A0A3S3Q4H4   A0A0P5LGN1   A0A210Q0H2   D1J6X7   G3T3S0   G3TRD5   B8PXJ8   A0A2G8KRI8   A0A401SP53   A0A3Q7QIU4   A0A2Y9HY96   D2HS01   A0A1S3H6H9   A0A401NPM2   H0XD96   A0A3B4B558   K9IU16   A0A3Q7RXX2   A0A3Q3M710   G1LQ73   W5MPH5   A0A383Z701   A0A383Z7D9   A0A2Y9EMS6  

Pubmed

22118469    26354079    26227816    24845553    29403074    18362917    + More
19820115    20075255    28648823    28004739    20566863    21282665    24508170    30249741    20798317    21347285    23537049    21719571    21292972    28812685    29023486    30297745    20010809    26383154    25463417   

EMBL

AGBW02007651    OWR55102.1    KQ460878    KPJ11659.1    RSAL01000093    RVE47915.1    + More
ODYU01002714    SOQ40567.1    NWSH01000207    PCG78420.1    PCG78419.1    PCG78418.1    JTDY01000502    KOB76873.1    KQ459582    KPI99014.1    NEVH01021221    PNF19756.1    KK853093    KDR11510.1    PYGN01000219    PSN50906.1    PNF19757.1    PNF19755.1    GEDC01008120    JAS29178.1    GBYB01000919    JAG70686.1    GEBQ01005597    JAT34380.1    KQ971347    EFA05489.1    GEDC01013338    JAS23960.1    NNAY01001310    OXU24398.1    KZ288254    PBC30888.1    GEZM01007055    JAV95444.1    GEZM01007054    JAV95445.1    KQ767320    OAD53411.1    DS235171    EEB12945.1    KQ434972    KZC12738.1    GL762647    EFZ20995.1    KK107078    QOIP01000011    EZA60358.1    RLU16920.1    GL441701    EFN64407.1    ADTU01013171    KQ976401    KYM92587.1    GL449036    EFN83423.1    KQ981335    KYN42644.1    LBMM01000361    KMQ99399.1    KB632330    ERL92570.1    KQ982769    KYQ50870.1    GL888182    EGI65726.1    APGK01055716    APGK01055717    KB741269    ENN71457.1    GGMS01010776    MBY79979.1    ABLF02033059    ABLF02033063    LJIG01000129    KRT86811.1    GECU01018154    JAS89552.1    GDIQ01166711    JAK85014.1    GDIP01092541    JAM11174.1    GDIQ01081934    JAN12803.1    GDIQ01191592    JAK60133.1    GDIP01203162    JAJ20240.1    GDIP01207313    JAJ16089.1    GDIP01122333    JAL81381.1    GDIP01235565    JAI87836.1    GDIP01181671    JAJ41731.1    GDIQ01253826    GDIQ01252532    GDIQ01251187    GDIQ01208203    GDIQ01206598    GDIQ01205148    GDIP01091575    LRGB01000944    JAK43522.1    JAM12140.1    KZS14480.1    GDIP01216023    JAJ07379.1    GDIP01218171    JAJ05231.1    GDIP01083883    JAM19832.1    GDIQ01253827    GDIQ01252533    GDIQ01251188    GDIQ01248042    GDIQ01208204    GDIQ01206599    GDIQ01205149    GDIQ01203451    JAJ97897.1    GDIQ01192649    GDIQ01094534    JAL57192.1    GDIQ01209199    GDIQ01201697    GDIQ01184354    GDIQ01084837    JAK67371.1    GDIQ01269623    GDIQ01267299    GDIQ01199098    GDIQ01184353    GDIQ01178604    GDIQ01165219    GDIQ01140626    GDIQ01129878    GDIQ01036152    JAL11100.1    GDIP01185927    JAJ37475.1    GDIQ01196295    JAK55430.1    GDIP01086691    JAM17024.1    GDIP01107393    JAL96321.1    GDIQ01123629    JAL28097.1    GDIP01157679    JAJ65723.1    GDIQ01009066    JAN85671.1    GDIQ01092283    JAL59443.1    GL732551    EFX79631.1    GDIP01018111    JAM85604.1    GDIQ01029761    JAN64976.1    GDIP01107394    JAL96320.1    NCKU01006687    RWS03249.1    GDIQ01169856    JAK81869.1    NEDP02005302    OWF42253.1    FN598566    CBI63263.1    EU287986    ABZ79726.1    MRZV01000410    PIK50612.1    BEZZ01000418    GCC32179.1    GL193258    EFB19059.1    BFAA01003941    GCB62814.1    AAQR03070941    AAQR03070942    AAQR03070943    GABZ01000800    JAA52725.1    ACTA01083799    AHAT01005284    AHAT01005285    AHAT01005286    AHAT01005287   

Proteomes

UP000007151    UP000053240    UP000283053    UP000218220    UP000037510    UP000053268    + More
UP000235965    UP000027135    UP000245037    UP000007266    UP000002358    UP000215335    UP000005203    UP000242457    UP000009046    UP000076502    UP000192223    UP000053097    UP000279307    UP000000311    UP000005205    UP000078540    UP000008237    UP000078541    UP000036403    UP000030742    UP000075809    UP000007755    UP000019118    UP000007819    UP000076858    UP000000305    UP000285301    UP000242188    UP000007646    UP000230750    UP000287033    UP000286641    UP000248481    UP000085678    UP000288216    UP000005225    UP000261520    UP000261640    UP000008912    UP000018468    UP000261681   

Pfam

PF00520   Ion_trans

Interpro

IPR027359   Volt_channel_dom_sf        + More
IPR028801   TPC1       
IPR005821   Ion_trans_dom       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       

SUPFAM

SSF47473   SSF47473       

Gene 3D

1.20.120.350    

ProteinModelPortal

A0A212FMX6   A0A194R2B4   A0A437BBZ4   A0A2H1VIA3   A0A2A4K419   A0A2A4K2Z5   + More
A0A2A4K3C1   A0A0L7LMU2   A0A194Q1Z0   A0A2J7PTT9   A0A067QPX2   A0A2P8Z326   A0A2J7PTU8   A0A2J7PTU6   A0A1B6DU32   A0A0C9QCA4   A0A1B6MEL7   D2A6B3   A0A1B6DE94   K7IN16   A0A232F1S9   A0A088A8Q4   A0A2A3EGQ6   A0A1Y1NBW7   A0A1Y1NFP5   A0A310SA12   E0VHQ9   A0A154PN53   E9IEK8   A0A1W4WI41   A0A026WWZ4   E2AQ73   A0A1W4WSY0   A0A158NEU4   A0A195BVH7   E2BLT9   A0A195FRV6   A0A0J7L7X6   U4UR78   A0A151WSM0   F4WJE8   N6TYV1   A0A2S2QQC8   J9K983   A0A0T6BI11   A0A1B6IRK8   A0A0P5LQC5   A0A0P5W0M2   A0A0P6DAA0   A0A0P5K371   A0A0P5A761   A0A0N7ZVX8   A0A0P5TS73   A0A0P4XWY9   A0A0P5BRX1   A0A0N8B6F7   A0A0P5A5V7   A0A0P4ZEA0   A0A0P5WQ39   A0A0N8AQ54   A0A0P5S0P0   A0A0P5M5U4   A0A0P5NLE8   A0A0P5BDU6   A0A0P5LE06   A0A0P5WGR0   A0A0P5V3X6   A0A0P5QI87   A0A0P5DE72   A0A0P6I5P3   A0A0N8CCU7   E9GLT0   A0A0N8DMW7   A0A0P6GTU1   A0A0P5UXL4   A0A3S3Q4H4   A0A0P5LGN1   A0A210Q0H2   D1J6X7   G3T3S0   G3TRD5   B8PXJ8   A0A2G8KRI8   A0A401SP53   A0A3Q7QIU4   A0A2Y9HY96   D2HS01   A0A1S3H6H9   A0A401NPM2   H0XD96   A0A3B4B558   K9IU16   A0A3Q7RXX2   A0A3Q3M710   G1LQ73   W5MPH5   A0A383Z701   A0A383Z7D9   A0A2Y9EMS6  

PDB

6C9A     E-value=1.30419e-99,     Score=927

KEGG

101739181    K16896 two pore calcium channel protein 1 | (RefSeq) two pore calcium channel protein 1-like

GO

GO:0005245   GO:0016021   GO:0005509   GO:0005765   GO:0010008   GO:0072345   GO:0042802   GO:0010508   GO:0005216   GO:0006811   GO:0016020   GO:0006412   GO:0004672   GO:0005524   GO:0006468   GO:0006418   GO:0000049   GO:0016876   GO:0055085  

PANTHER

PTHR46474  

Length:

403

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

102.81057

Exp number, first 60 AAs:

1.63716

Total prob of N-in:

0.59710

outside

1  -  183

TMhelix

184  -  206

inside

207  -  212

TMhelix

213  -  235

outside

236  -  249

TMhelix

250  -  272

inside

273  -  403

 

 

Pi

256.668416

Theta

166.057567

Tajima's D

1.497146

CLR

0.163929

CSRT

0.786210689465527

Interpretation

Uncertain