Gene

KWMTBOMO09433

Pre Gene Modal

BGIBMGA013079

Annotation

PREDICTED:_protein_strawberry_notch-like_[Bombyx_mori]

Location

Bomo_Chr16(-):1129208-1167966      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.607

CDS

ATGTCAAGACGTGCCTACGCCGAGGATCCGGCGCCGTCAGATGATTCTGATTTCGATGATGAAGAGGATCCTGATAATTTGGAGGTGCCAGGTGGAGGTAAAACCCTGGCTGCTGCAGCCCGGATGGCCGACAAGAAGGTACCACAAGCAACTGCGCCACAAGTCACGGTGAGACCTACCACAAATCCACTTGCAGCACCGTCCGGCGTTGCGTTTGGACAAACGCACAACGGGAAGCCAATAAAGATACAGGCCAGCTCCTTGACGAAACCCTTCAATCTCCTCAACCTGCCAGGAGTCGGACGCGGAGGAATGGGCGCGGCGATGGCTCCGTTCGCGGCGGGTTCGTCGGCCGCATTCAACGCGGCCTCGTTACTCGCGCAGATGGAGATGGTCGGCATTACGGGCGTCAACTCGTATTTGCTGCAGAATCTCAATCAGATCATAGCGGCCGGCATGGGGGGCTCGATGCTCGGTCAGTTCTCGCAGCAGCTACCCCCCTGGGCTGGTCAGATCAAGCCCGGAATGTGGCACCAGGATAAGATGCCTGGAGAAGAAGAGGAAGTGGACGATGAAGAAATGGGAGTCGCAGAAACATATGCGGACTACATGCCGCCAAAGGTGAAACTAGGCAGGAAACATCCTGATCCTGTGGTGGAGACGGCGTCGTTGTCGTCCGTGGAGCCGGTGGACGTGACGTACAAGCTGAGTCTGCCGGACGAGACGATCCGGGGCGGGCTGCTGTCGGCCTTGCAGCTGGAGGCCGTGGTGTACGCGTCGCAGGCCCACGAGCACACGCTCCCGGACGGGACCAGGGCGGGCTTCCTCATAGGTGACGGTGCGGGTGTGGGCAAAGGTCGCACGATAGCCGGCATTATATTCGAGAACTACATCAAGGGTCGGAAGCGAGCCATATGGGTGTCCGTCTCCAACGACCTCAAGTACGACGCCGAGAGGGACCTCCGGGACATCGGGGCCGGGAAAATTGAAGTCTACCCTCTCAATAAGTTCAAGTACGCGAAGATCTCGTCGGCCGTGAACGGCAACGTGAAGAAGGGGGTCGTGTTCGCCACCTACTCCTCGCTCATCGGCGAGACCGCCAGCAACAACACCAAGTACAGGTCCAGGCTGAAGCAGCTGCTGCAGTGGTGCGGGGAGGACTTTGACGGAGTCATCGTATTTGACGAGTGTCACAAGGCAAAGAACCTCTGCCCCGTCGGCTCCGGGAAGGCGACGAAGACAGGTCTGACGGCCCTCGAGCTGCAGAACAAGCTGCCCAAGGCGAGGGTGGTGTACGCGTCCGCCACCGGGGCCTCGGAGCCCAGGAACATGGCGTACATGGTGCGCCTCGGGATATGGGGGGAGGGGACGCCCTTCCCGACCTTTATGGACTTCATTAACGCTGTGGAGAAGAGAGGCGTGGGCGCCATGGAGATAGTGGCGATGGACATGAAGCTGCGCGGGATGTACATAGCGCGCCAGCTGTCCTTCCACGGAGTGTCCTTCCGCATCGAGGAGGTGCCGCTCTCCGACGCCTTCAAGGAGACCTACGACAAGAGCGTCGCGCTGTGGGTGGAGGCCATGCAGCGGTTCACGGAGGCCGCCGAGCTGATAGACGCGGAGTCGAGGATGAGGAAGACCATGTGGGGACAGTTCTGGTCTGCTCATCAGAGGTTCTTCAAGTACCTGTGTATTGCCGCTAAGGTGAACCACGCCGTGGTGACAGCCCGCGAGGCCGTGAAGTGCGGCAAGTGTGTCGTCATCGGCCTGCAGAGCACCGGGGAGGCGCGCACCCTCGACCAGCTCGAGAGGGACGACGGGGACCTCACAGACTTCGTGTCCACCGCCAAGGGGGTGCTGCAGACGCTTGTGGAGAAGCACTTCCCGGCGCCGGACCGCGACCGCATCAACCGGCTGCTCGGGCTCGGCGCCAACAGGCCGCCGCCCCCCGCGCACGCCGCGCTCCCCGCGCCCCCGCACAACGGCACCAACGGTCGGGACGACGACGCCAACACGTCCAAGAGAAAGTTGACGTCACGCCAGCAAGCGAACGCCGCGGCCAAGCGCGCCCGCGGGGGCTCCTCGTCCGACGAGTTCGTCCGCGGCGGCTCCTCCGACGAGCTGGAGATGGAGTCGGACGAGGAGCAGCAGCGGGCCGCCTCCGACTCCGACCTCAGCGACTTCAACCCCTTCAGGGGCGGCAGCGACAGCGACGACGAACCCTGGCTGAATCGCAAAAAGAAACCAAAGAAGAAGAAGGCTGCATCTCCCAAGAAGAAGACCTCGACCACGCAGGACAAGATCGAGAACATGTTCACCCGCAAGAACAGCGCGCCCCCCGCCCCCACCCTCACCGTCACCACCAGCTCCGGCGCCAGCCTCACCGGGACGCCGGTCGGCACCAACGGCCTGTATCTAGGTCGCAGCCGCAGCAGCGCGCCGCCCCGGTCGGCCATCGAGCGCGCGTGCAGCATGAAGGAGGAGCTGCTGGCGGCCGTGCACCGGCTGGGTCGCCGCCTGCCGCCCAACACGCTCGACCAGCTCGTCGACGAGCTGGGGGGCACCGACAACGTGGCTGAGATGACAGGTCGCAAAGGGCGCGTGGTCCAAACAGAGGACGGACAGATCTTATACGAGAGCCGATCCGAAGCGGACGTGCCGCTCGAGACCCTGAACCTGACTGAGAAGCAAAGGTTCATGGATGGCGAGAAGGACGTGGCCATCATCTCTGAGGCCGCCTCCAGTGGTATCTCATTACAGAGTGATCGGAGGGCGAGGAATCAGAGGCGACGAGTTCACATCACACTAGAGCTGCCGTGGTCCGCGGACAGAGCCATACAACAGTTCGGGCGGACCCACCGCTCCAACCAGGTGAACGCCCCGGAGTACATATTCCTGATCTCGGACCTGGCCGGGGAGAGGCGGTTCGCGTGCACCGTCGCCAAGCGCCTGGAGTCGCTGGGTGCCCTCACGCACGGGGACCGCAGGGCCACCGAGACCAGGGACCTGTCGCAGTTCAACATCGACAACAAGTATGGTCGCACGGCGCTGGAGGCGGTGATGCGAGCCATCATGAAGTACGAGACGCCGCTGGTGCCCGCGCCCGCCGACTACCACGGAGACTTCTTCCAGGACGTGGCCAGCGCGCTCGTCGGCGTGGGGCTCATCGTCAACAGCGACGCCGCGCCCGGCGTGCTCGCGCTCGACAAGGACTATAACAACATGTCGAAGTTCTTGAACAGGATATTGGGCATGCCGGTGGAACTGCAGAACAGACTCTTCAAATACTTCACGGACACGCTCGCCGCCGTTATGGAACAAGCGAAGAGGAGCGGTCGGTTCGACCTGGGCATCCTGGACCTGGGCAGCGCGGGCGAGACCGTGCGGCGCCTGCGCTGCGTGCGCTTCCTGCGCCGCCACGCCACCGGACGCGCGCCCGTCGAGCTGCACACCGTCTCCTCCGAGCGCGGCATGGAATGGACTGAGGCTCTGGAGAAGCACTCGGAGCTGACGGGCCCCAAGGAGGGCTTCTACCTGTCGCAGCAGGCCCGCAACAGCAAGCACACCGCCGTGCTCTGCGCCGCCGCGCTCACCAACTCCAAGAAGGACAAGCTCAGCAAGAAGGACCTCATGTTTCAGATATACAGGCCGAACACTGGTCTGCAGCTGCGGCTGGAGTCGCTGGCGGAGATCGAGAAGAAGTACCGCAAGGTGGATGCGGACGAGGCGGAGAGCTGGTGGCGCGCGCAGCACGCGGCGTCGCTGCGGGTGTGCTCGCACGCGTACTGGCGGGACGCGTGCCGCGCCGCCGACTGCGAGGTGGGGCTGCGGCGCCGCCTGCACCACGTGCTGGCCGGCTCCGTGCTGGCCGTGTGGGCGCGCGTGGAGGCCACGCTGGCCGCGCGCTCGCAGCTGCACAAGATGCAGGTCGTGCGCATCAAGACCGACGACGGACTCAAGATTGTCGGCACGCTGATCCCCAAGAACTGCGTTGAGCCGCTGAAGGAGTCCCTCGCCGCGGACGCCGTCTCCGTCACGGAGCAGACCTTCGAGCAGACGGAGCTACACTGA

Protein

MSRRAYAEDPAPSDDSDFDDEEDPDNLEVPGGGKTLAAAARMADKKVPQATAPQVTVRPTTNPLAAPSGVAFGQTHNGKPIKIQASSLTKPFNLLNLPGVGRGGMGAAMAPFAAGSSAAFNAASLLAQMEMVGITGVNSYLLQNLNQIIAAGMGGSMLGQFSQQLPPWAGQIKPGMWHQDKMPGEEEEVDDEEMGVAETYADYMPPKVKLGRKHPDPVVETASLSSVEPVDVTYKLSLPDETIRGGLLSALQLEAVVYASQAHEHTLPDGTRAGFLIGDGAGVGKGRTIAGIIFENYIKGRKRAIWVSVSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVSFRIEEVPLSDAFKETYDKSVALWVEAMQRFTEAAELIDAESRMRKTMWGQFWSAHQRFFKYLCIAAKVNHAVVTAREAVKCGKCVVIGLQSTGEARTLDQLERDDGDLTDFVSTAKGVLQTLVEKHFPAPDRDRINRLLGLGANRPPPPAHAALPAPPHNGTNGRDDDANTSKRKLTSRQQANAAAKRARGGSSSDEFVRGGSSDELEMESDEEQQRAASDSDLSDFNPFRGGSDSDDEPWLNRKKKPKKKKAASPKKKTSTTQDKIENMFTRKNSAPPAPTLTVTTSSGASLTGTPVGTNGLYLGRSRSSAPPRSAIERACSMKEELLAAVHRLGRRLPPNTLDQLVDELGGTDNVAEMTGRKGRVVQTEDGQILYESRSEADVPLETLNLTEKQRFMDGEKDVAIISEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFACTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRTALEAVMRAIMKYETPLVPAPADYHGDFFQDVASALVGVGLIVNSDAAPGVLALDKDYNNMSKFLNRILGMPVELQNRLFKYFTDTLAAVMEQAKRSGRFDLGILDLGSAGETVRRLRCVRFLRRHATGRAPVELHTVSSERGMEWTEALEKHSELTGPKEGFYLSQQARNSKHTAVLCAAALTNSKKDKLSKKDLMFQIYRPNTGLQLRLESLAEIEKKYRKVDADEAESWWRAQHAASLRVCSHAYWRDACRAADCEVGLRRRLHHVLAGSVLAVWARVEATLAARSQLHKMQVVRIKTDDGLKIVGTLIPKNCVEPLKESLAADAVSVTEQTFEQTELH

Uniprot

H9JU67   A0A2H1V3M8   A0A437BF95   A0A194R707   A0A194Q0A0   A0A212FN27   + More
A0A139WGA0   A0A139WGU1   A0A139WGK9   A0A2A4K1W6   A0A026VXX2   A0A195DCR5   A0A195FU75   A0A195BCH9   E2AF27   E2BZX5   A0A1Q3F8P7   A0A195C684   A0A1Q3F8H9   W4VRF7   A0A2J7R848   A0A067R5Q0   A0A1B6K2L0   A0A1S4G7A3   A0A1B6E4P7   A0A1B0G3Z8   Q17PW5   A0A1A9W185   A0A0K8VQV2   A0A0K8VCA4   Q7QHI7   A0A1I8M306   W5J8F3   A0A2M4B9D3   A0A182FVI1   A0A2M4B9X2   A0A0A9WXT7   A0A182Q7B7   A0A0A9Y5M8   A0A182GST2   W8AKS6   W8AWV2   W8B7S2   A0A034V3Q7   A0A182HDV4   W8BHU6   A0A1A9VB05   A0A1B0A9Z8   A0A1J1HG53   A0A1J1HKH9   T1HUJ5   A0A1A9XC27   A0A1B0BGJ3   A0A2S2PFJ0   A0A2M3Z5F2   L7M738   A0A131XCF2   A0A224YD96   A0A131YWY5   A0A2R5LAR5   E0VMM9   A0A146LWG7   A0A0K8WAS8   A0A087UXI6   A0A1E1XBV7   A0A1E1XQW7   A0A2P6LI19   V9K9N7   A0A401SZB6   A0A091TBB9   H9GMG0   A0A1L8HQM1   A0A2Y9RSW4   W5MEV6   F6YBA0   A0A0P7U5I5   A0A1W5A6Y6   A0A1W5A696   A0A0K8S4W6   A0A0T6B7G6  

Pubmed

19121390    26354079    22118469    18362917    19820115    24508170    + More
30249741    20798317    24845553    17510324    12364791    25315136    20920257    23761445    25401762    26483478    24495485    25348373    25576852    28049606    28797301    26830274    20566863    26823975    28503490    29209593    24402279    30297745    21881562    27762356    20431018   

EMBL

BABH01004162    BABH01004163    BABH01004164    BABH01004165    BABH01004166    BABH01004167    + More
BABH01004168    BABH01004169    ODYU01000525    SOQ35437.1    RSAL01000071    RVE49107.1    KQ460878    KPJ11651.1    KQ459582    KPI99007.1    AGBW02007651    OWR55109.1    KQ971345    KYB27028.1    KYB27027.1    KYB27029.1    NWSH01000261    PCG77918.1    KK107796    QOIP01000013    EZA47704.1    RLU15499.1    KQ980989    KYN10676.1    KQ981264    KYN43976.1    KQ976528    KYM81900.1    GL438984    EFN67982.1    GL451708    EFN78752.1    GFDL01011148    JAV23897.1    KQ978220    KYM96374.1    GFDL01011170    JAV23875.1    GANO01003817    JAB56054.1    NEVH01006723    PNF37003.1    KK852685    KDR18510.1    GECU01002323    JAT05384.1    GEDC01004414    JAS32884.1    CCAG010005646    CCAG010005647    CH477188    EAT48829.1    GDHF01011062    JAI41252.1    GDHF01015842    JAI36472.1    AAAB01008816    EAA05169.4    ADMH02002067    ETN59668.1    GGFJ01000495    MBW49636.1    GGFJ01000650    MBW49791.1    GBHO01033974    JAG09630.1    AXCN02001714    GBHO01017201    JAG26403.1    JXUM01085204    JXUM01085205    JXUM01085206    KQ563487    KXJ73756.1    GAMC01017280    JAB89275.1    GAMC01017282    JAB89273.1    GAMC01017279    JAB89276.1    GAKP01021026    JAC37926.1    JXUM01130476    JXUM01130477    KQ567584    KXJ69359.1    GAMC01017281    JAB89274.1    CVRI01000002    CRK86967.1    CRK86966.1    ACPB03011481    JXJN01013884    GGMR01015359    MBY27978.1    GGFM01002998    MBW23749.1    GACK01005362    JAA59672.1    GEFH01003972    JAP64609.1    GFPF01004532    MAA15678.1    GEDV01004848    JAP83709.1    GGLE01002453    MBY06579.1    DS235317    EEB14635.1    GDHC01007939    JAQ10690.1    GDHF01004078    JAI48236.1    KK122158    KFM82075.1    GFAC01002587    JAT96601.1    GFAA01001704    JAU01731.1    MWRG01000049    PRD38236.1    JW861819    AFO94336.1    BEZZ01000738    GCC35731.1    KK444120    KFQ71127.1    CM004467    OCT98378.1    AHAT01005140    AAMC01042902    AAMC01042903    AAMC01042904    JARO02008539    KPP62592.1    GBRD01017539    JAG48288.1    LJIG01009333    KRT83290.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000007151    UP000007266    + More
UP000218220    UP000053097    UP000279307    UP000078492    UP000078541    UP000078540    UP000000311    UP000008237    UP000078542    UP000235965    UP000027135    UP000092444    UP000008820    UP000091820    UP000007062    UP000095301    UP000000673    UP000069272    UP000075886    UP000069940    UP000249989    UP000078200    UP000092445    UP000183832    UP000015103    UP000092443    UP000092460    UP000009046    UP000054359    UP000287033    UP000001646    UP000186698    UP000248480    UP000018468    UP000008143    UP000034805    UP000192224   

PRIDE

H9JU67    L7M738   

Pfam

PF13871   Helicase_C_4        + More
PF13872   AAA_34

Interpro

IPR027417   P-loop_NTPase        + More
IPR026741   SNO       
IPR039187   SNO_AAA       
IPR026937   SBNO_Helicase_C_dom       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR001650   Helicase_C       
IPR014001   Helicase_ATP-bd       

SUPFAM

SSF52540   SSF52540        + More
SSF56219   SSF56219       

Gene 3D

3.60.10.10    

ProteinModelPortal

H9JU67   A0A2H1V3M8   A0A437BF95   A0A194R707   A0A194Q0A0   A0A212FN27   + More
A0A139WGA0   A0A139WGU1   A0A139WGK9   A0A2A4K1W6   A0A026VXX2   A0A195DCR5   A0A195FU75   A0A195BCH9   E2AF27   E2BZX5   A0A1Q3F8P7   A0A195C684   A0A1Q3F8H9   W4VRF7   A0A2J7R848   A0A067R5Q0   A0A1B6K2L0   A0A1S4G7A3   A0A1B6E4P7   A0A1B0G3Z8   Q17PW5   A0A1A9W185   A0A0K8VQV2   A0A0K8VCA4   Q7QHI7   A0A1I8M306   W5J8F3   A0A2M4B9D3   A0A182FVI1   A0A2M4B9X2   A0A0A9WXT7   A0A182Q7B7   A0A0A9Y5M8   A0A182GST2   W8AKS6   W8AWV2   W8B7S2   A0A034V3Q7   A0A182HDV4   W8BHU6   A0A1A9VB05   A0A1B0A9Z8   A0A1J1HG53   A0A1J1HKH9   T1HUJ5   A0A1A9XC27   A0A1B0BGJ3   A0A2S2PFJ0   A0A2M3Z5F2   L7M738   A0A131XCF2   A0A224YD96   A0A131YWY5   A0A2R5LAR5   E0VMM9   A0A146LWG7   A0A0K8WAS8   A0A087UXI6   A0A1E1XBV7   A0A1E1XQW7   A0A2P6LI19   V9K9N7   A0A401SZB6   A0A091TBB9   H9GMG0   A0A1L8HQM1   A0A2Y9RSW4   W5MEV6   F6YBA0   A0A0P7U5I5   A0A1W5A6Y6   A0A1W5A696   A0A0K8S4W6   A0A0T6B7G6  

KEGG

101745292    no KO assigned | (RefSeq) protein strawberry notch-like

GO

GO:0006355   GO:0005634   GO:0004386   GO:0021999  

PANTHER

PTHR12706  

Length:

1356

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.37522

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.03810

outside

1  -  1356

 

 

Pi

223.314829

Theta

162.470243

Tajima's D

1.261579

CLR

0.322039

CSRT

0.730013499325034

Interpretation

Uncertain