Pre Gene Modal
BGIBMGA012778
Annotation
PREDICTED:_LIM_domain_kinase_1_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.829
Sequence
CDS
ATGAATATATTAGAATTCTTTCGAGTACTAAGATTGTATGTGGCGGTGCTGAGGTCCTTGCACCACCCGAACGTGCTCCGGTTCGTCGGCGTCCTGTACAAGGACAAGCGACTGCACCTGGTCACCGAATACGTGGCCGGAGGAACGCTGCACCAGCTCCTACAGGACCCGTCCGCGAGCCTGAGCTGGGCGTGCCGTGGGCGGCTGGCGCGCGACGTGTCCCGCGGGGTGGGCTACCTGCACCGCCGGAACGTCATACACCGCGACCTCAACTCGCACAACTGTCTCGTGCGTGAGGATCGCACCGTGATTGTAGCTGATTTCGGTTTGGCTCGCATCGTCCAAAGGACCACGGCGCACGGATCCTTAAAGCGGAAACGATACACAGTCGTCGGCAACCCCTACTGGATGGCCCCCGAGATGATGAACGGCAACGTGTACGACGAGAAGGTCGACGTGTTCTCCTTCGGGATCATACTGTGCGAGATAATAGGCAGGGTGTCGGCGGACCCCGACTGCCTGCCCCGGAGGTCGGACTTCGGCCTCAACGAGGAGGTGTTTCTCGAGAAGTTCTGCGCGTCCTGCCCTGAACCCTTCTACAGGATCGCCTTCTTGGCCTGCAATCTCGACCCGGACGATAGACCGCCTATGGAGGTCATAGAAACGTGGCTCGAAGCGTTAGTGGAACAGCTTTCTGAATCGGAGCTTAAAGAGAATCTAGATGTGCTTTGCAACGATCTCGACTCCCCGACCGAGGGCTCTCTTGTCAAGAGCGATTCTCAGTCAACGTTAGAAGAGACGCGCTCGATATCGTACCGGCCGCTGGTGCCCGTCGCGCTCGGCAAGTGCGTGTCCGCCTCCCAGGTGGGGGCGGGGGGCGGGGGGCCCGCGCGGGGGGGCCGCTGGGGGCGCGCGCACAGCCACCAGGCGCTGCACACGCCCGGGTACATCCTGCAGGCCAGGGGACCCACCATCGACATCACCCAGGTGGACGACATCAGCGAGTGGCTAGAGCCGACGCCCCTCAAGCGATCACAGCCAGACCCTCAGCTGCACCGGCCGCGACACCAGGTTCTCCTGCCGGCCTTCCTCAGGAACCAGTCCGTAGAAGAACTGAGACCAAAGCACGTGCCCAGCGACGACTCTTCGGACGACAGTGAGGCCGGCGTCACCAGCGCCGCGCCGCAGCCCGCCGTCACGTACCGGAGCCCGGCCGAGCGGCGCCTCCCCGAGGTGGACGTGCGCCGGTACAACATCGACTTCCTGGCCGGCAGCCCCGTCATGGCGCAGGGCATCAAGAACATACCAAAAATAGTCGAAAGAGACAAAACCAATGAGAAAACCGGTTTCTTCACCAAAAAACTGTTATCGCCGAAATTAAGTCGATTATTCAGACCGAACGCGACCGAGGCGGGGGGCAAGCCTCACGCCGACCTCAACAAGTCCAACAGCACGTTCTTCGTGCAGCAGCCGCCCGCCCTCGGCCGCTCGTCCTACAGGATACGGCCCGTCGGGGACGCCGGCGCGGACGTGCTGCAGAGCGACATCAAACTGGCCAGCATGGGGAGGCCCATGACGCCCACGCTGAGGAGGTGTCCCGACCGCCCGGACCTCGCCGACGCCCGCTTCAGCTGTCGGGACTTCAGGACTAAGATGATTAACAACGACCACGTCAAGGCGCACATCACGAGGGGCGCCCCGGTGGGACAGCCGCACGTACAGAGGAGGAGGAACCCGGACAAGAGCGAGCCCCGGATGGGCATCTCGCGGAGCAACTACGTCAGTCTAGCCAACCTAAAGATAAACAATAAGGCGAACGGTCTGGATGTCACCGAGAGAGCCAGACGCGAGGTCAACGATAACTCCCCCGTGGAGAGGGTCGTGTGA
Protein
MNILEFFRVLRLYVAVLRSLHHPNVLRFVGVLYKDKRLHLVTEYVAGGTLHQLLQDPSASLSWACRGRLARDVSRGVGYLHRRNVIHRDLNSHNCLVREDRTVIVADFGLARIVQRTTAHGSLKRKRYTVVGNPYWMAPEMMNGNVYDEKVDVFSFGIILCEIIGRVSADPDCLPRRSDFGLNEEVFLEKFCASCPEPFYRIAFLACNLDPDDRPPMEVIETWLEALVEQLSESELKENLDVLCNDLDSPTEGSLVKSDSQSTLEETRSISYRPLVPVALGKCVSASQVGAGGGGPARGGRWGRAHSHQALHTPGYILQARGPTIDITQVDDISEWLEPTPLKRSQPDPQLHRPRHQVLLPAFLRNQSVEELRPKHVPSDDSSDDSEAGVTSAAPQPAVTYRSPAERRLPEVDVRRYNIDFLAGSPVMAQGIKNIPKIVERDKTNEKTGFFTKKLLSPKLSRLFRPNATEAGGKPHADLNKSNSTFFVQQPPALGRSSYRIRPVGDAGADVLQSDIKLASMGRPMTPTLRRCPDRPDLADARFSCRDFRTKMINNDHVKAHITRGAPVGQPHVQRRRNPDKSEPRMGISRSNYVSLANLKINNKANGLDVTERARREVNDNSPVERVV
Summary
Uniprot
Pubmed
Proteomes
Interpro
ProteinModelPortal
PDB
5NXC
E-value=2.60857e-73,
Score=702
Ontologies
Topology
Length:
628
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02401
Exp number, first 60 AAs:
0.02271
Total prob of N-in:
0.00124
outside
1 - 628
Population Genetic Test Statistics
Pi
248.700895
Theta
134.340595
Tajima's D
2.374862
CLR
0.499104
CSRT
0.932653367331633
Interpretation
Uncertain
