SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09429
Pre Gene Modal
BGIBMGA012777
Annotation
serine_protease_24_[Mamestra_configurata]
Location in the cell
Cytoplasmic   Reliability : 1.657 Nuclear   Reliability : 1.445
 

Sequence

CDS
ATGCTTGGGAGTTCGGGGTTGTTGTTTCTACTTGTGCTTTGTGGGCAGAGCCTTTCCCAAAAAGTCAAGCCCTACTTCATTGAAGATATCAACAAAGATGTAGATACCACAAATCTCCGTATTGTATCTGGTTGGGAGGCGACTCCCGGTCAGCACCCCCACCACGCCGCCCTCCGCATGGTGGATCCAACCGGCGGAGTGTTTGCTTGCGGTGGCTCTATCGTCCACAGGGAGTGGGTGATCACTGCAGCTCACTGTGTTGCCGGACGCATCACGGTGGTCATTCGCGCCGGCGTTACGAACTTGACCACTCCGGAATACATTTCGGAATCGACAGAATGGTACAACTACCCCACGTATGACGACACGCGGCCTAACTTGGTACAGCCCAACGACATCTCTTTACTGAGACTCCATCGACCGGTCGTCTTTACCAGATACCTCCAGCCAATTCGTGTGCAATCGTCGGCTGATGCCTTCAGGAACTACGACGGACTCACCGTGTATGCCAGCGGTCATGGTCGTCTCTGGACGAATGGTGCTACTCCCGAGGTCCTGAACTGGGTATACTTGCGTGCTGTCGCCAACCCGACTTGCGCCCTCAACTTCGGCACCCTGATTACGCCGAATGCGATCTGCGCCAGATTCTTCAATGTGACGTCACAGTCTACTTGCCAGGGTGACAGCGGCGGTCCACTCGTCCACGTGGATCCTCAGGGTGTACCGATTCTGATCGGTGTGACCTCCTTTGTTGCTGGCGGCGAATTCGGTTGTCACTCTGGTTTCCCAGCTGGTTTCATTCGTCCTGGACCGTTCCATGACTGGTTCTATCGTGTCTCGGGAGTAGATTTCGAAAATCTTGACCACGACGAGGTCACTGAAGAACCAGAACCGGAAACCACTACCTCGCCACCTACCACCGTTACACCAGAACCTGAAGAAGAGGAAGAATCTGGCGAAGACTCCGAAGAAGATTCCGAGGAAGACCCGGACCTGTCTGAATTGTTGAAGAAATTAGAGGTCAAAGTTAAGGTGAAGGTCAAGGTTAACAAATTTAAGCTGAAGAAGAAGGTCCACGTTAAGAAAAGAATTCCAGCACGCAGTCATTAA
Protein
MLGSSGLLFLLVLCGQSLSQKVKPYFIEDINKDVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAGRITVVIRAGVTNLTTPEYISESTEWYNYPTYDDTRPNLVQPNDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHGRLWTNGATPEVLNWVYLRAVANPTCALNFGTLITPNAICARFFNVTSQSTCQGDSGGPLVHVDPQGVPILIGVTSFVAGGEFGCHSGFPAGFIRPGPFHDWFYRVSGVDFENLDHDEVTEEPEPETTTSPPTTVTPEPEEEEESGEDSEEDSEEDPDLSELLKKLEVKVKVKVKVNKFKLKKKVHVKKRIPARSH

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR018114   TRYPSIN_HIS       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR033116   TRYPSIN_SER       
SUPFAM
SSF50494   SSF50494       
PDB
2HLC     E-value=2.17115e-24,     Score=278

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.987857
 
 
Length:
369
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0535
Exp number, first 60 AAs:
0.01553
Total prob of N-in:
0.00130
outside
1  -  369
 
 

Population Genetic Test Statistics

Pi
253.366843
Theta
172.882316
Tajima's D
1.315467
CLR
0.051856
CSRT
0.742712864356782
Interpretation
Uncertain
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