Gene

KWMTBOMO09423  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012774

Annotation

uncharacterized_protein_LOC778500_[Bombyx_mori]

Location

Bomo_Chr16(+):980597-981302      View in EpiBrowser

Full name

Translation machinery-associated protein 16 homolog      

Location in the cell

Nuclear   Reliability : 3.7

CDS

ATGGGAAATCTGAAGAAAAATTTAGAGAAACTAAAACACCCTAACAGTAGAAAAACTATGACATTAGCTAAGAAATTGAAGAAATCTGAGAAAAAGGATCAAAGCAAACTCGGTACTCATATTAAGCAAAATTTAATCGGCGAAAAAATCATGTGGTTCAAAGAGAGAATACCAGAGGAATGCGAAGTTTTTGATAAAGAACAGACACTGAAATTAATCGAAAGCTATTTAAGTCGTTTCGATGAAGAACTAGAACAGATCGCATTAAAAAATTCAATTGGGCAAAGGAAAAACCGTCAACACGCGAGTAGGGAAGACGTTATAAATATGACGAGGAAAAAGGAACAGGACGAATTTGAGACTTGCGGTATAGAAATACCGGATTTAATGGACCCACAACAAATGAACGTGTTGAGGAATTGGAATGGTGAACTGAGATTTCTTCAGCATTTTAAGTTAAAAAGATTCACTAAGAAAATTTTGATGTAG

Protein

MGNLKKNLEKLKHPNSRKTMTLAKKLKKSEKKDQSKLGTHIKQNLIGEKIMWFKERIPEECEVFDKEQTLKLIESYLSRFDEELEQIALKNSIGQRKNRQHASREDVINMTRKKEQDEFETCGIEIPDLMDPQQMNVLRNWNGELRFLQHFKLKRFTKKILM

Similarity

Belongs to the UPF0534 family.

Keywords

Complete proteome   Reference proteome  

Feature

chain  Translation machinery-associated protein 16 homolog

Uniprot

H9JTB2   A0FDP9   A0A194RSI3   A0A1E1WLX4   A0A0L7LME5   A0A194Q029   + More
S4PGK0   A0A2H1VTD9   A0A2A4K695   D6W9S4   N6UD64   V9IMD5   A0A2J7Q475   A0A1B6H4N3   A0A1B6LSJ8   A0A1Y1NBP7   A0A1B6J9V8   E2BE78   E0VKT6   A0A2J7Q463   A0A1B6J906   A0A0P5DRB2   A0A0P6HEU7   A0A1B6E4P4   A0A1S3D8B4   E9GFQ6   T1HYT1   R4G7S3   A0A0L7RGF1   A0A067R259   U4U6H9   A0A069DWU9   A0A023F7N3   A0A154PEI8   A0A0V0G9W2   A0A2A3ECW7   A0A0P4VN77   B4R4Y6   B3NUV3   A0A1W4VFB2   G7H849   H0RNC5   Q9VXY4   A0A1A9XRS4   A0A1B0AP99   B4IJ96   A0A224Y0G0   Q29JD1   A0A0K8VJ26   B4PWA4   B4L5A4   B3MR61   D3TQP4   Q6XHQ3   A0A034WRX2   W8B2C0   A0A2G8JVA7   A0A0A1WRT2   K7IYW4   A0A1Q3F4C7   A0A2G8JPA0   A0A1A9VLF9   A0A240SWD4   A0A1B0ADW7   B4NC13   A0A3B0JZM8   A0A0A9WZ41   B4MAA1   A0A0M4FB37   A0A1I8PX58   W4YPX6   B4JMK2   A0A0N7ZDH0   B0WIV4   Q17PB1   A0A0L0C4P5   A0A1S4EVR6   A0A0P6ASH2   U5ESG8   W4Z7P5   A0A1I8N029   A0A146LIY1   A0A2T7PZL3   H3AHD6   A0A0P5ZX93   T1GPA7   A0A2M4AF52   A0A2M4C196   A0A3Q1I9S6   A0A2M4C107   A0A2M4C1X7   A0A2C9H8K7   A0A1S4GIB2   A0A084WRU8   A0A182RZD5   Q7PQH2   A0A1I8JTS1   W5JES8  

Pubmed

19121390    26354079    26227816    23622113    18362917    19820115    + More
23537049    28004739    20798317    20566863    21292972    24845553    26334808    25474469    27129103    17994087    10731132    12537572    12537569    15632085    17550304    20353571    14525923    25348373    24495485    29023486    25830018    20075255    25401762    17510324    26108605    25315136    26823975    9215903    12364791    24438588    20920257    23761445   

EMBL

BABH01004177    DQ985589    ABJ97179.1    KQ459700    KPJ20354.1    GDQN01003035    + More
JAT88019.1    JTDY01000595    KOB76529.1    KQ459582    KPI98937.1    GAIX01003627    JAA88933.1    ODYU01004311    SOQ44048.1    NWSH01000086    PCG79761.1    PCG79762.1    KQ971312    EEZ99432.1    APGK01004410    APGK01027778    KB740671    KB735736    ENN79625.1    ENN83314.1    JR051762    AEY61554.1    NEVH01018390    PNF23383.1    GECZ01000159    JAS69610.1    GEBQ01013314    JAT26663.1    GEZM01007121    JAV95364.1    GECU01011746    JAS95960.1    GL447768    EFN85923.1    DS235250    EEB13992.1    PNF23381.1    GECU01012044    JAS95662.1    GDIP01151760    LRGB01000655    JAJ71642.1    KZS17082.1    GDIQ01020896    JAN73841.1    GEDC01004395    JAS32903.1    GL732542    EFX81766.1    ACPB03009789    GAHY01002222    JAA75288.1    KQ414596    KOC69930.1    KK852751    KDR17115.1    KB632093    ERL88682.1    GBGD01003080    JAC85809.1    GBBI01001465    JAC17247.1    KQ434878    KZC09834.1    GECL01001326    JAP04798.1    KZ288292    PBC29132.1    GDKW01003390    JAI53205.1    CM000366    EDX17943.1    CH954180    EDV47051.1    BT132773    AET14857.1    BT132847    AEV12222.1    AE014298    AY119258    JXJN01001282    CH480847    EDW51075.1    GFTR01002547    JAW13879.1    CH379063    EAL32370.3    GDHF01013456    JAI38858.1    CM000162    EDX01735.1    CH933811    EDW06363.2    CH902622    EDV34266.1    CCAG010007675    EZ423746    ADD20022.1    AY232130    AAR10153.1    GAKP01001877    GAKP01001875    GAKP01001873    JAC57077.1    GAMC01015382    JAB91173.1    MRZV01001214    PIK39673.1    GBXI01013144    GBXI01007378    JAD01148.1    JAD06914.1    GFDL01012631    JAV22414.1    MRZV01001486    PIK37540.1    CH964239    EDW82372.2    OUUW01000003    SPP78816.1    GBHO01029862    GBRD01006675    JAG13742.1    JAG59146.1    CH940655    EDW66160.1    CP012528    ALC49757.1    AAGJ04160426    CH916371    EDV91945.1    GDRN01038882    JAI67224.1    DS231953    EDS28780.1    CH477193    EAT48520.1    JRES01000926    KNC27227.1    GDIP01025075    JAM78640.1    GANO01002361    JAB57510.1    GDHC01011180    JAQ07449.1    PZQS01000001    PVD38865.1    AFYH01179028    AFYH01179029    AFYH01179030    AFYH01179031    AFYH01179032    AFYH01179033    AFYH01179034    AFYH01179035    AFYH01179036    GDIP01041873    JAM61842.1    CAQQ02391199    GGFK01005947    MBW39268.1    GGFJ01009941    MBW59082.1    GGFJ01009848    MBW58989.1    GGFJ01009847    MBW58988.1    AAAB01008888    ATLV01026212    KE525408    KFB52942.1    EAA08844.4    APCN01005504    ADMH02001358    ETN62857.1   

Proteomes

UP000005204    UP000053240    UP000037510    UP000053268    UP000218220    UP000007266    + More
UP000019118    UP000235965    UP000008237    UP000009046    UP000076858    UP000079169    UP000000305    UP000015103    UP000053825    UP000027135    UP000030742    UP000076502    UP000242457    UP000000304    UP000008711    UP000192221    UP000000803    UP000092443    UP000092460    UP000001292    UP000001819    UP000002282    UP000009192    UP000007801    UP000092444    UP000230750    UP000002358    UP000078200    UP000091820    UP000092445    UP000007798    UP000268350    UP000008792    UP000092553    UP000095300    UP000007110    UP000001070    UP000002320    UP000008820    UP000037069    UP000095301    UP000245119    UP000008672    UP000015102    UP000265040    UP000076407    UP000030765    UP000075900    UP000007062    UP000075840    UP000000673   

PRIDE

H9JTB2    A0FDP9    Q9VXY4   

Pfam

PF11176   Tma16        + More
PF00561   Abhydrolase_1

Interpro

IPR021346   Tma16        + More
IPR038356   Tma16_sf       
IPR026630   EPM2A-int_1       
IPR012337   RNaseH-like_sf       
IPR029058   AB_hydrolase       
IPR000639   Epox_hydrolase-like       
IPR000073   AB_hydrolase_1       

SUPFAM

SSF53098   SSF53098        + More
SSF53474   SSF53474       

Gene 3D

1.20.1440.170     3.40.50.1820    

ProteinModelPortal

H9JTB2   A0FDP9   A0A194RSI3   A0A1E1WLX4   A0A0L7LME5   A0A194Q029   + More
S4PGK0   A0A2H1VTD9   A0A2A4K695   D6W9S4   N6UD64   V9IMD5   A0A2J7Q475   A0A1B6H4N3   A0A1B6LSJ8   A0A1Y1NBP7   A0A1B6J9V8   E2BE78   E0VKT6   A0A2J7Q463   A0A1B6J906   A0A0P5DRB2   A0A0P6HEU7   A0A1B6E4P4   A0A1S3D8B4   E9GFQ6   T1HYT1   R4G7S3   A0A0L7RGF1   A0A067R259   U4U6H9   A0A069DWU9   A0A023F7N3   A0A154PEI8   A0A0V0G9W2   A0A2A3ECW7   A0A0P4VN77   B4R4Y6   B3NUV3   A0A1W4VFB2   G7H849   H0RNC5   Q9VXY4   A0A1A9XRS4   A0A1B0AP99   B4IJ96   A0A224Y0G0   Q29JD1   A0A0K8VJ26   B4PWA4   B4L5A4   B3MR61   D3TQP4   Q6XHQ3   A0A034WRX2   W8B2C0   A0A2G8JVA7   A0A0A1WRT2   K7IYW4   A0A1Q3F4C7   A0A2G8JPA0   A0A1A9VLF9   A0A240SWD4   A0A1B0ADW7   B4NC13   A0A3B0JZM8   A0A0A9WZ41   B4MAA1   A0A0M4FB37   A0A1I8PX58   W4YPX6   B4JMK2   A0A0N7ZDH0   B0WIV4   Q17PB1   A0A0L0C4P5   A0A1S4EVR6   A0A0P6ASH2   U5ESG8   W4Z7P5   A0A1I8N029   A0A146LIY1   A0A2T7PZL3   H3AHD6   A0A0P5ZX93   T1GPA7   A0A2M4AF52   A0A2M4C196   A0A3Q1I9S6   A0A2M4C107   A0A2M4C1X7   A0A2C9H8K7   A0A1S4GIB2   A0A084WRU8   A0A182RZD5   Q7PQH2   A0A1I8JTS1   W5JES8  

PDB

2KKM     E-value=1.32091e-07,     Score=128

KEGG

101740686    K14860 translation machinery-associated protein 16 | (RefSeq) translation machinery-associated prote

GO

GO:0005634   GO:0003824  

PANTHER

PTHR13349   PTHR45913  

Length:

162

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.35277

outside

1  -  162

 

 

Pi

142.897334

Theta

112.627301

Tajima's D

0.651409

CLR

0

CSRT

0.562821858907055

Interpretation

Uncertain