SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09418
Pre Gene Modal
BGIBMGA013084
Annotation
PREDICTED:_cell_division_control_protein_45_homolog_[Papilio_machaon]
Full name
Cell division control protein 45 homolog      
Alternative Name
PORC-PI-1
Location in the cell
Cytoplasmic   Reliability : 1.292 PlasmaMembrane   Reliability : 1.157
 

Sequence

CDS
ATGTTTATAGAGGACCTCAGAAATGACTTTTACAATCTCCTTTTAGGCAATCGCGTGTTATTATTAGTGCATTATGATGTAGATGCAATATGTACATGTAAAATACTTCAAGGATTATTCAAGAGTGATAATATATCATATACGCTAGTGCCGGTGGGGGGTATTTCTGAATTGAAGACTGCTTACGAAGAAAACAATGAAGAAGTCAAGTACGTAGTGTTGGTGAACTGCGGAGGTACTATAGACCTGGTCGATATCTTACAGCCCGAGGAGGATGTGGTATTTTTTGTGCTGGACTCCCATAAACCGACTGATGTCTGCAATGTTTATAGCGATGGACAGGTGAGACTGGTGTACCGTGATGAAGAAGAGAACATTCCTAATTTTGATGATATATTCAGAGATGATGATGATGAGAACGAAGAAGAAATGCCAAGTGGTCGAGAAGACCTAGAAGCTTTTGTCGAGAGACGGCGTCAACGTAGAGAATGGGAAACAAAACGAAACGATCTTATGTTTAACTACACTCAATTCTCATATTATGGTAAACCGAGTGCTTGCATAGCAGTAGAGCTGGCCTGGCTGCTATGTCGCAGCGGAGTGGAGTACACGTGGGCCGGATGCATAGCTGTCAGTGCGTATGCTGCCACTCACACACGCTCCCCTGCACAAGCTCTGCTTGATGCACATGCGCTGCATCGACATCTCGCCGCGCAACTACCTTCACATGGTGCTTCAGTAAGCATGGAAAAGGATGCGTTCCTGCCACTCTACCGGACCTGGTCTTTGGAGAATGCGTTGAAGTATTCTCCAGTTGTGGCTCCTCATCTTCGTCTTCATTCACTGGCTGGTGCTGACAGATTGAGGCAGCTATTGGCAGATATGGGGATCCCGCTGCAGCAGGCCCGCCAGGCCTACCGCTCCATGGACGTGGAGCTGCGGCGCTCGCTGCTGGACGCGCTGGACGCCGCCGCCGACAAGCACCACCTGCCGCGCCTCACGCACGCCACCTACCTCCTGCGCCGCGACCACTGCGCGCCGCTCGCCGCACTCGACTGCGTCTACTGCGTCATGGCGCTGCTCGAGCTCGAAGGCCCCGGCGGGTTCCAGCTGGCGCTGGCGTCGGTGGACACGTCGAGCGCGGAGTGCGAGGCCCGGCAGCGCGGGCTGGGCGCGGCGCGGCGCGGGCTGGCGGCGGCGGCGGCGCTGGCGGGCGCCACGCTGGCGGCGCGCGCGCTGCACCACGCCGGGCCCTTCGCGCACTTCACCATCAGCGAGGGCGCGGCGGAGTGCGAGTGGGGTCCGTGGTGGCTGGCGGTGTGCGCGCGGTGGGTGGGCGCGGGCGCGGGGCGGGGGGCGGCCGCCGTGCTGGTGGCGGCGCCCCGGGGCCGCACCGTGCTGCTGTGCGGGGTGCCGCCGCCGCAGCGGACTGACACCAGGAATCTGTTCGGGGCGGCGTTCGAGCAGGCGGCGGCCAAGTGCGGCGCCTCCGTGTCGCTCGACCACTTCGACTCCGCCGTGGTGACGCTGCCCGCCGCGCAGCGCCCGCAGTTCCTGGACGCGCTCACCGCGCTGCTGGCCTGA
Protein
MFIEDLRNDFYNLLLGNRVLLLVHYDVDAICTCKILQGLFKSDNISYTLVPVGGISELKTAYEENNEEVKYVVLVNCGGTIDLVDILQPEEDVVFFVLDSHKPTDVCNVYSDGQVRLVYRDEEENIPNFDDIFRDDDDENEEEMPSGREDLEAFVERRRQRREWETKRNDLMFNYTQFSYYGKPSACIAVELAWLLCRSGVEYTWAGCIAVSAYAATHTRSPAQALLDAHALHRHLAAQLPSHGASVSMEKDAFLPLYRTWSLENALKYSPVVAPHLRLHSLAGADRLRQLLADMGIPLQQARQAYRSMDVELRRSLLDALDAAADKHHLPRLTHATYLLRRDHCAPLAALDCVYCVMALLELEGPGGFQLALASVDTSSAECEARQRGLGAARRGLAAAAALAGATLAARALHHAGPFAHFTISEGAAECEWGPWWLAVCARWVGAGAGRGAAAVLVAAPRGRTVLLCGVPPPQRTDTRNLFGAAFEQAAAKCGASVSLDHFDSAVVTLPAAQRPQFLDALTALLA

Summary

Subunit
Associated with ORC2. Interacts with HELB.
Associated with ORC2. Interacts with HELB (PubMed:25933514).
Similarity
Belongs to the CDC45 family.
Keywords
Cell cycle   Complete proteome   DNA replication   Nucleus   Phosphoprotein   Reference proteome   3D-structure   Alternative splicing   Cytoplasm   Disease mutation   Dwarfism   Polymorphism  
Feature
chain  Cell division control protein 45 homolog
splice variant  In isoform 2.
sequence variant  In MGORS7; decreased protein level; dbSNP:rs879255633.
EMBL
BABH01004178    BABH01004179    BABH01004180    BABH01004181    BABH01004182    BABH01004183    + More
BABH01004184    BABH01004185    BABH01004186    ODYU01003090    SOQ41403.1    NWSH01000086    PCG79773.1    KQ459582    KPI98939.1    KQ459700    KPJ20356.1    ACPB03009329    GBBI01003715    JAC14997.1    KK852802    KDR16293.1    KK854801    PTY18855.1    GFTR01006955    JAW09471.1    NEVH01005904    PNF38168.1    GEZM01057716    JAV72125.1    GGMS01017183    MBY86386.1    GECU01002162    JAT05545.1    GGMR01005577    MBY18196.1    JXUM01081860    KQ563273    KXJ74145.1    GFXV01004157    MBW15962.1    NNAY01000122    OXU30770.1    GEZM01057717    JAV72124.1    ABLF02024971    CH478641    EAT32693.1    KK107570    EZA48863.1    QOIP01000005    RLU22661.1    KQ435709    KOX80006.1    GL448740    EFN83930.1    CH477475    EAT40319.1    GBYB01006107    JAG75874.1    AXCM01007581    AJWK01022752    AJWK01022753    ABLF02039328    KQ976453    KYM85317.1    KQ435134    KZC14878.1    GGMR01019176    MBY31795.1    ADTU01008602    AJVK01023820    AJVK01023821    GL888206    EGI65200.1    KQ777667    OAD52067.1    KQ971348    EFA05648.1    KQ982708    KYQ51812.1    UFQS01001695    UFQT01001695    SSX11889.1    SSX31451.1    JXJN01012503    GFXV01007061    MBW18866.1    KQ414924    KOC59400.1    AXCN02001081    KZ288442    PBC25700.1    QCYY01001827    ROT74957.1    AADN05000505    KB376592    AKCR02000030    EMC88936.1    PKK25989.1    ABQF01029280    KK122584    KFM83038.1    BC123732    AAI23733.1    AK147013    CH466521    BAE27607.1    EDK97534.1    AF098068    AJ223729    AF081536    AF081537    AF081538    AF081539    BC028635    GBHO01011684    GDHC01021402    JAG31920.1    JAP97226.1    AEMK02000096    DQIR01245662    DQIR01259016    HDC01140.1    HDC14494.1    BT020809    AAX08826.1    KE674677    ERE76198.1    DQ016322    AAY41172.1    CABD030119964    CABD030119965    CABD030119966    CABD030119967    AJFE02045136    AJFE02045137    AF062495    AF053074    AJ223728    AF081535    AY358971    AK293123    AK293338    BT006792    AY572790    CT841513    AC000082    AC000087    AC000088    CH471176    BC006232    BC010022    CYRY02003558    VCW68172.1    JH882094    ELR50902.1    GABC01007453    GABF01008944    GABD01005361    GABE01003596    NBAG03000088    JAA03885.1    JAA13201.1    JAA27739.1    JAA41143.1    PNI90392.1    PNI90396.1    CH479190    EDW25939.1   
Pfam
PF02724   CDC45        + More
PF01612   DNA_pol_A_exo1
PF01712   dNK
Interpro
IPR038763   DHH_sf        + More
IPR003874   CDC45       
IPR036397   RNaseH_sf       
IPR031314   DNK_dom       
IPR027417   P-loop_NTPase       
IPR012337   RNaseH-like_sf       
IPR002562   3'-5'_exonuclease_dom       
SUPFAM
SSF64182   SSF64182        + More
SSF52540   SSF52540       
SSF53098   SSF53098       
Gene 3D
PDB
5DGO     E-value=6.57939e-46,     Score=465

Ontologies

Topology

Subcellular location
Nucleus  
Cytoplasm  
Length:
527
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13329
Exp number, first 60 AAs:
0.0199
Total prob of N-in:
0.00328
outside
1  -  527
 
 

Population Genetic Test Statistics

Pi
168.502424
Theta
146.5509
Tajima's D
0.978797
CLR
1.14748
CSRT
0.647667616619169
Interpretation
Uncertain
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