Gene

KWMTBOMO09412  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013087

Annotation

PREDICTED:_crossover_junction_endonuclease_EME1-like?_partial_[Papilio_machaon]

Location

Bomo_Chr16(-):869240-870766      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.535

CDS

ATGTCGAAGCGCGCTTACGACGAGCAATCCGAATTGTACTTGCGGGGAGAAAACAGGAAATGCGTCACCGTCGACAAACAAGGCAACGGAGTCAGTCGGCTGTGGCAACAGATGATAGCTGTACTGCCACATTCCAGTTTAGAAACGTCGAGAGCATTGTGCGCTAAATATCCAACTCCGCTTGACCTGTATGAGTCCCTTAACTCACCGGATAGTGTTAATGAATTGGCGAACATCGGTGTATCAAGAACCGCTGTCCCGGGTTCAAAGGCGCGTCGCATTGGACCTGAATTTGCCAGGAAATTACACACATTGTTCACAGTCACCGACGGAGATATTTTGTTAGATTGA

Protein

MSKRAYDEQSELYLRGENRKCVTVDKQGNGVSRLWQQMIAVLPHSSLETSRALCAKYPTPLDLYESLNSPDSVNELANIGVSRTAVPGSKARRIGPEFARKLHTLFTVTDGDILLD

Uniprot

A0A194Q040   S4PD80   A0A194RSB4   A0A2A4K6X0   A0A1E1WKR5   A0A2H1WLI6   + More
A0A3S2PEI2   A0A212FM70   A0A151IKY6   F4X397   A0A151WEQ3   A0A151JRI3   A0A195BEN9   A0A158NHB2   A0A026WIC1   A0A195FGW1   A0A0M9AA21   E2AP72   E9IHL3   A0A088AF59   A0A0T6B848   E2BNH5   A0A2A3EP88   A0A1B6M529   A0A1Y1LWC7   A0A232F6Q9   A0A1B6CUR5   A0A1Y1LQT7   A0A1Y1LNX2   A0A1Y1LUS3   K7JJF8   A0A1B6L704   A0A154PT81   A0A1B6EFP8   A0A0L7QYK8   A0A1B6IMC5   A0A2H8TQM0   A0A2R7VSU1   J9MAM4   A0A1W4VRD5   J3JUY5   A0A067RC06   A0A023EXB3   A0A336M418   N6TVA2   U4U3N2   A0A336MTC3   A0A0M5J4F6   A0A2J7RPL4   A0A2J7RPK5   B4P833   A0A2J7RPL3   A1Z8C0   Q7JZM5   B3NN50   B4QAN1   B3MIK5   B4KQ86   B4HN03   T1I6B6   A0A2S2QAY4   A0A2Z5TZG6   Q28XK0   B4GG96   A0A0P5T871   B4LKP5   A0A0P4ZMK3   A0A2P8Z785   A0A0P5AHF2   A0A1B0C8C0   A0A0P6F6H5   A0A0P6C877   A0A0P5JXV9   A0A0P4YZZ2   A0A0P4W0Q1   V5FVW2   A0A3B0J033   B4J7U0   A0A1A9ZX59   A0A1B0GEY3   T1GQN5   A0A1A9VY06   A0A3Q0IPC8   A0A423SVG9   A0A1B0BHK4   A0A1I8MVL7   R7UL09   A0A084VSF6   A0A1J1I4G6   A0A444SQW0   A0A444SHJ0   A0A0P5BXY6   A0A182NG93   M7BX91   A0A0L0CDY1   A0A182QIX6  

Pubmed

26354079    23622113    22118469    21719571    21347285    24508170    + More
30249741    20798317    21282665    28004739    28648823    20075255    22516182    24845553    25474469    23537049    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    26760975    15632085    29403074    25315136    23254933    24438588    23624526    26108605   

EMBL

KQ459582    KPI98947.1    GAIX01003771    JAA88789.1    KQ459700    KPJ20367.1    + More
NWSH01000086    PCG79766.1    GDQN01003489    JAT87565.1    ODYU01009396    SOQ53792.1    RSAL01000071    RVE49095.1    AGBW02007654    OWR54831.1    KQ977151    KYN05258.1    GL888609    EGI59078.1    KQ983238    KYQ46282.1    KQ978592    KYN29952.1    KQ976509    KYM82652.1    ADTU01000256    KK107207    QOIP01000002    EZA55411.1    RLU26055.1    KQ981606    KYN39611.1    KQ435706    KOX80287.1    GL441481    EFN64745.1    GL763289    EFZ19920.1    LJIG01009210    KRT83536.1    GL449414    EFN82754.1    KZ288199    PBC33623.1    GEBQ01008950    JAT31027.1    GEZM01050880    JAV75327.1    NNAY01000833    OXU26272.1    GEDC01020072    JAS17226.1    GEZM01050873    JAV75331.1    GEZM01050877    JAV75329.1    GEZM01050882    GEZM01050878    JAV75326.1    GEBQ01020521    JAT19456.1    KQ435180    KZC14987.1    GEDC01000587    JAS36711.1    KQ414688    KOC63694.1    GECU01019633    JAS88073.1    GFXV01004475    MBW16280.1    KK854061    PTY10516.1    ABLF02040504    ABLF02040508    BT127050    AEE62012.1    KK852605    KDR20403.1    GBBI01004829    JAC13883.1    UFQT01000526    SSX24995.1    APGK01017247    KB739998    ENN81983.1    KB631984    ERL87672.1    UFQT01001720    SSX31517.1    CP012524    ALC40631.1    NEVH01001358    PNF42773.1    PNF42772.1    CM000158    EDW90080.1    PNF42770.1    AE013599    AAF58752.1    AY071164    AAL48786.2    CH954179    EDV56570.1    CM000362    CM002911    EDX06536.1    KMY92854.1    CH902619    EDV38081.1    CH933808    EDW09214.1    CH480816    EDW47307.1    ACPB03001801    GGMS01005487    MBY74690.1    FX985865    BBA93752.1    CM000071    EAL26316.1    CH479183    EDW35516.1    GDIQ01095586    JAL56140.1    CH940648    EDW61768.1    GDIP01212587    JAJ10815.1    PYGN01000164    PSN52361.1    GDIP01204091    LRGB01001361    JAJ19311.1    KZS12457.1    AJWK01000333    GDIQ01064817    JAN29920.1    GDIP01007346    JAM96369.1    GDIQ01193610    JAK58115.1    GDIP01221135    JAJ02267.1    GDRN01081682    JAI61969.1    GALX01006676    JAB61790.1    OUUW01000001    SPP74154.1    CH916367    EDW01146.1    CCAG010012634    CAQQ02136146    CAQQ02136147    QCYY01002708    ROT68190.1    JXJN01014402    AMQN01001147    KB300094    ELU07229.1    ATLV01015947    KE525048    KFB40900.1    CVRI01000037    CRK93273.1    SAUD01026684    RXG55761.1    SAUD01036743    RXG52793.1    GDIP01182376    JAJ41026.1    KB472301    EMP42471.1    JRES01000637    KNC29704.1    AXCN02001628   

Proteomes

UP000053268    UP000053240    UP000218220    UP000283053    UP000007151    UP000078542    + More
UP000007755    UP000075809    UP000078492    UP000078540    UP000005205    UP000053097    UP000279307    UP000078541    UP000053105    UP000000311    UP000005203    UP000008237    UP000242457    UP000215335    UP000002358    UP000076502    UP000053825    UP000007819    UP000192221    UP000027135    UP000019118    UP000030742    UP000092553    UP000235965    UP000002282    UP000000803    UP000008711    UP000000304    UP000007801    UP000009192    UP000001292    UP000015103    UP000001819    UP000008744    UP000008792    UP000245037    UP000076858    UP000092461    UP000268350    UP000001070    UP000092445    UP000092444    UP000015102    UP000078200    UP000079169    UP000283509    UP000092460    UP000095301    UP000014760    UP000030765    UP000183832    UP000288706    UP000075884    UP000031443    UP000037069    UP000075886   

PRIDE

A1Z8C0    Q7JZM5   

Pfam

PF02732   ERCC4

Interpro

IPR033310   Mms4/EME1/EME2        + More
IPR006166   ERCC4_domain       

ProteinModelPortal

A0A194Q040   S4PD80   A0A194RSB4   A0A2A4K6X0   A0A1E1WKR5   A0A2H1WLI6   + More
A0A3S2PEI2   A0A212FM70   A0A151IKY6   F4X397   A0A151WEQ3   A0A151JRI3   A0A195BEN9   A0A158NHB2   A0A026WIC1   A0A195FGW1   A0A0M9AA21   E2AP72   E9IHL3   A0A088AF59   A0A0T6B848   E2BNH5   A0A2A3EP88   A0A1B6M529   A0A1Y1LWC7   A0A232F6Q9   A0A1B6CUR5   A0A1Y1LQT7   A0A1Y1LNX2   A0A1Y1LUS3   K7JJF8   A0A1B6L704   A0A154PT81   A0A1B6EFP8   A0A0L7QYK8   A0A1B6IMC5   A0A2H8TQM0   A0A2R7VSU1   J9MAM4   A0A1W4VRD5   J3JUY5   A0A067RC06   A0A023EXB3   A0A336M418   N6TVA2   U4U3N2   A0A336MTC3   A0A0M5J4F6   A0A2J7RPL4   A0A2J7RPK5   B4P833   A0A2J7RPL3   A1Z8C0   Q7JZM5   B3NN50   B4QAN1   B3MIK5   B4KQ86   B4HN03   T1I6B6   A0A2S2QAY4   A0A2Z5TZG6   Q28XK0   B4GG96   A0A0P5T871   B4LKP5   A0A0P4ZMK3   A0A2P8Z785   A0A0P5AHF2   A0A1B0C8C0   A0A0P6F6H5   A0A0P6C877   A0A0P5JXV9   A0A0P4YZZ2   A0A0P4W0Q1   V5FVW2   A0A3B0J033   B4J7U0   A0A1A9ZX59   A0A1B0GEY3   T1GQN5   A0A1A9VY06   A0A3Q0IPC8   A0A423SVG9   A0A1B0BHK4   A0A1I8MVL7   R7UL09   A0A084VSF6   A0A1J1I4G6   A0A444SQW0   A0A444SHJ0   A0A0P5BXY6   A0A182NG93   M7BX91   A0A0L0CDY1   A0A182QIX6  

PDB

2ZIX     E-value=1.06097e-07,     Score=127

KEGG

101741395    K10882 crossover junction endonuclease EME1 [EC:3.1.22.-] | (RefSeq) crossover junction endonuclease

GO

GO:0006281   GO:0004519   GO:0005634   GO:0048476   GO:0003677   GO:0004518   GO:0016021   GO:0008821  

PANTHER

PTHR21077  

Length:

116

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000940000000000001

Exp number, first 60 AAs:

0.00058

Total prob of N-in:

0.50737

inside

1  -  116

 

 

Pi

163.89645

Theta

134.739248

Tajima's D

0.268565

CLR

11.929371

CSRT

0.448627568621569

Interpretation

Uncertain