SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO09405
Pre Gene Modal
BGIBMGA013090
Annotation
PREDICTED:_uncharacterized_protein_LOC106139265_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.238
 

Sequence

CDS
ATGGTTAACGTGAAAATATCGATATTAGTGCTTTTTGTTACATTGATCTTCGAACCATGCTGCAGCAGATCAGCCATGGACGTAGAGCAGTCGGTGGTGAGCGTCTACACAACGCAGCCTTCAGCGCCAGGAGCGCCTCTTGACGTCTACCATCAGCTGGCCAACAACATCGCTGAGAGGATCACTTCTCCGATATACAGGTTTCTCGGCATCGGCAACCGCACCCAAGAGAAGACAACCCAAAAACCCTGGGACAACATCGAAATACTAGACGAACCAATGAAATCTGTTCTGAAACCGCTTGACAACAGCATCACGACTGAGAGAGATGTAGAAGAATTATCAGCTGATGCTTTAAAGAAAATCGACAGGAAACCAGAGAAGATATCCCTCCTGCCTACCTACTTACCGGTTCCGGAAAAGCTCAATGATACGGACATCGACGAGCTGGATGATGATGATTTATTCCAGTTTGAGGACGACGATGAAGTCACCAAGCCAAGAGAAGGCCCTTTCATATACATACTAGAGTTGGCAGGCAGCATAATACAATTACTTTGGGGTGGCTTCTTGAGCTTGTTCAGGCCATCAACTAAGTCTAGTTAG
Protein
MVNVKISILVLFVTLIFEPCCSRSAMDVEQSVVSVYTTQPSAPGAPLDVYHQLANNIAERITSPIYRFLGIGNRTQEKTTQKPWDNIEILDEPMKSVLKPLDNSITTERDVEELSADALKKIDRKPEKISLLPTYLPVPEKLNDTDIDELDDDDLFQFEDDDEVTKPREGPFIYILELAGSIIQLLWGGFLSLFRPSTKSS

Summary

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.965633
 
 
Length:
201
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.84827
Exp number, first 60 AAs:
1.08188
Total prob of N-in:
0.36545
outside
1  -  171
TMhelix
172  -  194
inside
195  -  201
 
 

Population Genetic Test Statistics

Pi
36.793806
Theta
169.684727
Tajima's D
2.864647
CLR
0.390035
CSRT
0.973201339933003
Interpretation
Uncertain
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