Gene

KWMTBOMO09403

Pre Gene Modal

BGIBMGA001193

Annotation

PREDICTED:_uncharacterized_protein_LOC106135401_[Amyelois_transitella]

Location

Bomo_Chr16(-):605141-606716      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.719

CDS

ATGCATAAAGACAGCCAGATACAGCCGTCGATACTGCCTCGGGTGCCGTGTGCTGTAACTGCTGATGCTCATTCACAAACCCAGAGTGTTATCCATACTCTGGACGATTTGGCATCTTACAAAAATAAAATTCCTGTGCTTAAGCACATCCCTAAGGGGGCCAGGAATTTAGTCGCAGGAAAGCTCAGAGTGATTATGGACGGCTGCATAAACAATAACGGTGTGGCGGACTGGGTTTCCTTGTTGTCATTTTCTTACACGACTCTGAGAATTCCAGATCGAGGTGACCCCCGTTCGCTTACTGCAAAGGTTAAGGAGAATGCAAACAATAATAGCCCGTATTTTTTAGAGGACTTCAAACACAAGCCACGATCCATTGTCAAAAGAATCGAAGCCAAGGTTCATGAGGGTGATTTGCGTGGAGCTGTCCGTCTTTTAGTGTCGGAGGATTCTTTAGCACCTTTTAACGATGAGACCTTAAGCGCATTACGTGATAAACATCCTACTCCTTTTCGTCCCTTATCATTGCCGCCAGCGCCTGATTCTAGTTGCCCTTTTTTGACTGTCAACTCGGAGGATGTTGCAGACGCAATTAGTTCCTTTTATAGCGGCTCTGCACCTGGCCTTGATGGTCTACGTCCAAACCATTTAAAGGAGCTCATTTCCCCTTCCGCCGGTGAAAATGGTGTTCGTCTATTGCACTCAATTACAGACTTATGCAATTTCATACTAAGAGGTACGGTTAATGTACAGGTGTGTCCTTATTTGTACGGAGGTAGCTTATGCGCTCTAACTAAGAAGGACGGCGGTGTGAGACCAATTGCGGTGGGGTCTGTGCTGCGTCGTCTCGCTGCCAAGCTTGGGTGTCGGTCTGTAAGGAATGAAATGGCCTCGTACTTGCAGCCCCACCAGCTGGGCTTCGGGACTGCTCTTGGGTGTGAGGCCGCCATTCATGCTACCCGTGCATTTGCTATGAGCAGGGAGAGCTGTAACAGTGCAATTGTAAAGCTTGATATAAGGAATGCTTTTAATAGCTTAGAGAGAGATATAATTTTAAATGAAATCAAGGAAAAGATTCCGGCTTTATACCCATTCTTGTATCAGTGTTACAGCTCTTCCAGCAAGTTATTCTTTATGAAATCTTCCATTGACTCAGAGGTAGGTGCCCAGCAGGGCGATCCTCTTGGCCCATTAATTTTTAGTCTTGCTATCCACAGCATTATAAAGACCGTCAAGTCACCTTTAAACCTATGGTATTTAGATGACGGCACAATAGGTGGTCCCCCAGATTCCGTGCTAGACGACATCAGACTTTTATTTCCGAAGTTGCGAGATGTCGGCTTGGAGCAAGCGTAG

Protein

MHKDSQIQPSILPRVPCAVTADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMDGCINNNGVADWVSLLSFSYTTLRIPDRGDPRSLTAKVKENANNNSPYFLEDFKHKPRSIVKRIEAKVHEGDLRGAVRLLVSEDSLAPFNDETLSALRDKHPTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSAPGLDGLRPNHLKELISPSAGENGVRLLHSITDLCNFILRGTVNVQVCPYLYGGSLCALTKKDGGVRPIAVGSVLRRLAAKLGCRSVRNEMASYLQPHQLGFGTALGCEAAIHATRAFAMSRESCNSAIVKLDIRNAFNSLERDIILNEIKEKIPALYPFLYQCYSSSSKLFFMKSSIDSEVGAQQGDPLGPLIFSLAIHSIIKTVKSPLNLWYLDDGTIGGPPDSVLDDIRLLFPKLRDVGLEQA

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

A0A1S3DQS3   A0A2P8ZLV7   A0A194R3A6   A0A1W0X6D1   A0A226DSQ4   A0A226ENY2   + More
A0A1D1V0I0   A0A1D1VL73   A0A226DV40   A0A226F2H2   A0A1D1V0B4   A0A2V3IC56   A0A226DD92   A0A1Y1MJ73   A0A1D1V341   A0A1X7SSY7   A0A2B7ZX51   A0A226DXH2   A0A226EVZ6   A0A226D463   A0A1D1W821   A0A1X7TNR1   A0A226CYT8   A0A1Q9DZ07   A0A1Q9E7W5   A0A2K3NHH2   A0A251UV27   A0A1Q9C9N2   A0A1Q9DL84   A0A251RPE8   A0A251U8Z7   A0A1Q9CLQ1   A0A251SLN7   X6NKH2   X6LZW2   X6LZS6   A0A1X7UXU0   X6LXW7  

Pubmed

29403074    26354079    27649274    29688518    28004739    24500806    + More
28382043    28538728    24332546   

EMBL

PYGN01000020    PSN57485.1    KQ460779    KPJ12288.1    MTYJ01000015    OQV22928.1    + More
LNIX01000012    OXA48253.1    LNIX01000003    OXA58286.1    BDGG01000002    GAU92213.1    BDGG01000007    GAV01566.1    LNIX01000011    OXA48561.1    LNIX01000001    OXA63637.1    BDGG01000003    GAU95299.1    NBIV01000529    PXF39673.1    LNIX01000023    OXA43090.1    GEZM01032301    JAV84680.1    GAU95300.1    PDHN01000780    PGH37981.1    LNIX01000010    OXA49381.1    OXA61805.1    LNIX01000038    OXA39608.1    BDGG01000023    GAV09476.1    LNIX01000053    OXA37708.1    LSRX01000328    OLQ00411.1    LSRX01000234    OLQ03518.1    ASHM01021424    PNY02492.1    CM007893    OTG26899.1    LSRX01001462    OLP79640.1    LSRX01000486    OLP95909.1    CM007906    OTF86222.1    CM007897    OTG19252.1    LSRX01001088    OLP83851.1    CM007903    OTF99774.1    ASPP01007617    ETO26815.1    ASPP01026421    ETO07174.1    ASPP01027314    ETO06245.1    ASPP01027610    ETO05987.1   

Proteomes

UP000079169    UP000245037    UP000053240    UP000198287    UP000186922    UP000247409    + More
UP000007879    UP000236291    UP000215914   

Pfam

PF00078   RVT_1        + More
PF00628   PHD
PF02257   RFX_DNA_binding
PF00096   zf-C2H2
PF00858   ASC
PF03184   DDE_1
PF00001   7tm_1
PF00400   WD40

Interpro

IPR000477   RT_dom        + More
IPR013087   Znf_C2H2_type       
IPR036388   WH-like_DNA-bd_sf       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR019786   Zinc_finger_PHD-type_CS       
IPR003150   DNA-bd_RFX       
IPR036236   Znf_C2H2_sf       
IPR001873   ENaC       
IPR004875   DDE_SF_endonuclease_dom       
IPR020903   ENaC_CS       
IPR036390   WH_DNA-bd_sf       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR039779   RFX-like       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR037151   AlkB-like_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR004263   Exostosin       

SUPFAM

SSF57903   SSF57903        + More
SSF57667   SSF57667       
SSF46785   SSF46785       
SSF50978   SSF50978       

Gene 3D

1.10.10.10     3.30.40.10     2.130.10.10     2.60.120.590    

ProteinModelPortal

A0A1S3DQS3   A0A2P8ZLV7   A0A194R3A6   A0A1W0X6D1   A0A226DSQ4   A0A226ENY2   + More
A0A1D1V0I0   A0A1D1VL73   A0A226DV40   A0A226F2H2   A0A1D1V0B4   A0A2V3IC56   A0A226DD92   A0A1Y1MJ73   A0A1D1V341   A0A1X7SSY7   A0A2B7ZX51   A0A226DXH2   A0A226EVZ6   A0A226D463   A0A1D1W821   A0A1X7TNR1   A0A226CYT8   A0A1Q9DZ07   A0A1Q9E7W5   A0A2K3NHH2   A0A251UV27   A0A1Q9C9N2   A0A1Q9DL84   A0A251RPE8   A0A251U8Z7   A0A1Q9CLQ1   A0A251SLN7   X6NKH2   X6LZW2   X6LZS6   A0A1X7UXU0   X6LXW7  

KEGG

NA   

GO

GO:0003676   GO:0046872   GO:0016301   GO:0006355   GO:0003677   GO:0005272   GO:0016021   GO:0004930   GO:0003700   GO:0003964  

PANTHER

PTHR11690   PTHR12619   PTHR11062  

Length:

451

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04791

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.00768

outside

1  -  451

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

0

CSRT

0

Interpretation

Uncertain