Gene

KWMTBOMO09401

Annotation

PREDICTED:_uncharacterized_protein_LOC105380908_[Plutella_xylostella]

Location

Bomo_Chr16(-):484883-486266      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.024

CDS

ATGAACTTGCGTGTTTATATACATTTTGTAGGGACACCGGACATTATGGCGATCTCGCTATCGACACGTATACCAGAATTTTGGACAGAGCAACCAAGAGCATGGTACATTAGGATCGAGTCTATACTCGCCCCACAGAAACTTGGGGATGAAGTTAAATTTGACATTGTCGTATCGAAATTACCAAAAGAAGTCATTATTCAACTAACGGATTTTCTAGCTAAGCCACCGGACACAGGAAAATTTCTGGCGTTAAAAACGAAATTATTATCAACATTTGAGGAGTCCAAAAGTCGACAAATTGAAAGACTCATAGGAGAGATGGAACTAGGAGATCAAAAACCTTCTCAGCTATTGCGCCGCATGAGAGAGTTAGCCAGAGATAAAGTACCGGACGACACCCTGCGAGTGTTATGGCAAGGTCACTTACCTACAACATTGAGGGCAATCCTTACAGTCACTGAAACAAAAGATTTAGACAACCTCGCCATGATTGCGGATAATGTTGCGGAGGCCACGCGAGTTAACCACATCTCTGAGGTCGTTAATCAGCAAACCTCGAATATGGAACGACCATCAACAAGCGACACGTCTTTAATTTTAGCGGAAATAGCAAAATTAAGCGTCAGAATGACTAACATGGAGCAGTCACGATCCAGACAAAACTACTTTGATCGTAACCGTGATAGAAGTGGCTCACGATCTTCATCAAGACGCCGTACCCCACAGAACCCCAACTGGTTATGTTACTACCATTACAAGTTCCGTCAGAATGCTCAGAAATGCGTCCAACCATGTGCATGGAAACCAAGTTCGGAAAACTAG

Protein

MNLRVYIHFVGTPDIMAISLSTRIPEFWTEQPRAWYIRIESILAPQKLGDEVKFDIVVSKLPKEVIIQLTDFLAKPPDTGKFLALKTKLLSTFEESKSRQIERLIGEMELGDQKPSQLLRRMRELARDKVPDDTLRVLWQGHLPTTLRAILTVTETKDLDNLAMIADNVAEATRVNHISEVVNQQTSNMERPSTSDTSLILAEIAKLSVRMTNMEQSRSRQNYFDRNRDRSGSRSSSRRRTPQNPNWLCYYHYKFRQNAQKCVQPCAWKPSSEN

Uniprot

A0A2A4JUK3   A0A2H1WB17   A0A2H1V5N9   H9J4N2   A0A2W1BAJ4   A0A1E1WLV2   + More
A0A0L7LFW5   A0A0L7LSS0   A0A2A4JI65   A0A0L7KZ22   A0A0L7LFF1   A0A0L7LQI4   A0A0L7KTF4   T1I831   T1HU96   T1IE85   T1HGU2   A0A2W1BA89   A0A034V7S3   A0A0J7K6V1   A0A0A9Z2L8   A0A1Y1MA44   A0A026VRX8   A0A0K3CPY2   A0A151K1Q2   A0A151JF00   A0A0J7K6I6   A0A151JR52   A0A085NBV0   A0A085M716   A0A085N631   A0A2L2YSA7   A0A151IIJ9   A0A2A4J536   A0A0J7KD10   A0A139WA14   A0A1Y1MVP9   D7GYF3   A0A0M8ZPC3   D7EJX5   A0A151IZ47   A0A085NTM8   T1IE13   A0A0J7K6V3   A0A1I8NYN8   A0A151K0A8   A0A131Z7F2   A0A0L7QJB5   A0A0J7K6L8   A0A0P8ZL89   A0A1Y1MXV9   D6WTN9   A0A0A9YNN7   A0A224XWW2   A0A139W8G7   A0A0P8Y533   A0A026VX87   A0A151ITG2   A0A0L7QK36   A0A1I8Q981   A0A0N5DP72   A0A151K2U9   A0A0J7K0A7   K7JCQ5   A0A0M8ZXQ3   K7K066   A0A0J7K7T5   A0A3L8DMT5   A0A151IN66   A0A154PT26   A0A2A4J8M7   A0A1Y1NAW7   A0A182GZT6   A0A0J7NAK0   A0A293M3N6   A0A182H518   A0A085MVG5   A0A151JCH0   A0A1S3CY78   A0A2G8L3A3   A0A0M8ZYR5   A0A0K8SB41   A0A182GMM9   A0A154P674   A0A085MBZ4   A0A182G9J3   A0A0L8GDC9   A0A2G8JL30   A0A1W7R5R9  

Pubmed

19121390    28756777    26227816    25348373    25401762    28004739    + More
24508170    23552491    24929829    26561354    18362917    19820115    26830274    17994087    20075255    30249741    26483478    29023486   

EMBL

NWSH01000589    PCG75479.1    ODYU01007352    SOQ50042.1    ODYU01000815    SOQ36165.1    + More
BABH01022003    KZ150191    PZC72412.1    GDQN01003070    JAT87984.1    JTDY01001300    KOB74269.1    JTDY01000162    KOB78510.1    NWSH01001424    PCG71274.1    JTDY01004351    KOB68269.1    KOB74268.1    JTDY01000325    KOB77690.1    JTDY01005998    KOB66385.1    ACPB03012735    ACPB03016217    ACPB03034542    ACPB03011651    KZ150227    PZC72038.1    GAKP01020775    JAC38177.1    LBMM01012923    LBMM01012917    KMQ85926.1    KMQ85930.1    GBHO01005513    JAG38091.1    GEZM01036621    JAV82564.1    KK111495    EZA46390.1    LN877232    CTR11709.1    LKEX01009256    KYN50060.1    KQ979024    KYN24351.1    LBMM01013103    KMQ85816.1    KQ978645    KYN29457.1    KL367519    KFD66946.1    KL363221    KFD53012.1    KL367547    KFD64927.1    IAAA01053498    IAAA01053499    LAA11042.1    KQ977516    KYN02153.1    NWSH01003151    PCG66856.1    LBMM01009142    KMQ88358.1    KQ971745    KYB24749.1    GEZM01019580    GEZM01019578    JAV89619.1    GG695519    EFA13383.1    KQ438276    KOX67256.1    KQ971759    EFA12902.2    KQ980726    KYN14011.1    KL367475    KFD72824.1    ACPB03037918    LBMM01012479    KMQ86203.1    KQ981301    KYN43041.1    GEDV01001795    JAP86762.1    LHQN01021927    LHQN01025379    KOC58628.1    KOC58659.1    LBMM01012633    KMQ86093.1    CH902629    KPU75574.1    GEZM01017686    JAV90494.1    KQ971355    EFA07205.2    GBHO01008962    JAG34642.1    GFTR01003955    JAW12471.1    KQ973343    KXZ75568.1    CH905996    KPU81830.1    KK107653    EZA48265.1    KQ981018    KYN10257.1    KQ414987    KOC58988.1    LKEY01014428    KYN50445.1    LBMM01018089    KMQ83878.1    AAZX01005103    KQ435803    KOX73067.1    AAZX01005161    LBMM01012075    KMQ86422.1    QOIP01000006    RLU21744.1    KQ976959    KYN06793.1    KQ435204    KZC15052.1    NWSH01002598    PCG67884.1    GEZM01010484    JAV94030.1    JXUM01002162    JXUM01153874    KQ571812    KXJ68106.1    LBMM01007548    KMQ89630.1    GFWV01009909    MAA34638.1    JXUM01111110    KQ565471    KXJ70931.1    KL367631    KFD61211.1    KQ979048    KYN23218.1    MRZV01001127    MRZV01000236    PIK40395.1    PIK54731.1    KQ435794    KOX73840.1    GBRD01015841    JAG49985.1    JXUM01074757    KQ562849    KXJ75012.1    KQ434816    KZC06854.1    KL363205    KFD54740.1    JXUM01049417    KQ561603    KXJ78027.1    KQ422353    KOF75032.1    MRZV01001674    PIK36447.1    GEHC01001129    JAV46516.1   

Proteomes

UP000218220    UP000005204    UP000037510    UP000015103    UP000036403    UP000053097    + More
UP000078542    UP000078492    UP000007266    UP000053105    UP000095300    UP000078541    UP000053825    UP000007801    UP000046395    UP000002358    UP000279307    UP000076502    UP000069940    UP000249989    UP000079169    UP000230750    UP000053454   

PRIDE

H9J4N2   

Pfam

PF10551   MULE        + More
PF00078   RVT_1
PF17921   Integrase_H2C2
PF17917   RT_RNaseH
PF00665   rve
PF17919   RT_RNaseH_2
PF17906   HTH_48

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR018289   MULE_transposase_dom       
IPR000477   RT_dom       
IPR041588   Integrase_H2C2       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR041373   RT_RNaseH       
IPR036397   RNaseH_sf       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR041577   RT_RNaseH_2       
IPR034132   RP_Saci-like       
IPR041426   Mos1_HTH       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       

Gene 3D

2.40.70.10     3.30.420.10    

CDD

cd06094  RP_Saci_like

ProteinModelPortal

A0A2A4JUK3   A0A2H1WB17   A0A2H1V5N9   H9J4N2   A0A2W1BAJ4   A0A1E1WLV2   + More
A0A0L7LFW5   A0A0L7LSS0   A0A2A4JI65   A0A0L7KZ22   A0A0L7LFF1   A0A0L7LQI4   A0A0L7KTF4   T1I831   T1HU96   T1IE85   T1HGU2   A0A2W1BA89   A0A034V7S3   A0A0J7K6V1   A0A0A9Z2L8   A0A1Y1MA44   A0A026VRX8   A0A0K3CPY2   A0A151K1Q2   A0A151JF00   A0A0J7K6I6   A0A151JR52   A0A085NBV0   A0A085M716   A0A085N631   A0A2L2YSA7   A0A151IIJ9   A0A2A4J536   A0A0J7KD10   A0A139WA14   A0A1Y1MVP9   D7GYF3   A0A0M8ZPC3   D7EJX5   A0A151IZ47   A0A085NTM8   T1IE13   A0A0J7K6V3   A0A1I8NYN8   A0A151K0A8   A0A131Z7F2   A0A0L7QJB5   A0A0J7K6L8   A0A0P8ZL89   A0A1Y1MXV9   D6WTN9   A0A0A9YNN7   A0A224XWW2   A0A139W8G7   A0A0P8Y533   A0A026VX87   A0A151ITG2   A0A0L7QK36   A0A1I8Q981   A0A0N5DP72   A0A151K2U9   A0A0J7K0A7   K7JCQ5   A0A0M8ZXQ3   K7K066   A0A0J7K7T5   A0A3L8DMT5   A0A151IN66   A0A154PT26   A0A2A4J8M7   A0A1Y1NAW7   A0A182GZT6   A0A0J7NAK0   A0A293M3N6   A0A182H518   A0A085MVG5   A0A151JCH0   A0A1S3CY78   A0A2G8L3A3   A0A0M8ZYR5   A0A0K8SB41   A0A182GMM9   A0A154P674   A0A085MBZ4   A0A182G9J3   A0A0L8GDC9   A0A2G8JL30   A0A1W7R5R9  

KEGG

NA   

GO

GO:0005524   GO:0005634   GO:0004190   GO:0003676   GO:0015074  

Length:

274

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13026

Exp number, first 60 AAs:

0.12995

Total prob of N-in:

0.03655

outside

1  -  274

 

 

Pi

287.334778

Theta

45.958854

Tajima's D

4.870756

CLR

3.863309

CSRT

0.999950002499875

Interpretation

Uncertain